Protein–RNA interactions for Protein: F7BJK1

Pcdh1, Protocadherin 1 (Fragment), mousemouse

Predictions only

Length 1,077 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdh1F7BJK1 AC159641.1-201ENSMUST00000221117 177 ntTSL 3 BASIC13.69□□□□□ -0.22
Pcdh1F7BJK1 AC117588.1-201ENSMUST00000228510 999 ntBASIC13.69□□□□□ -0.22
Pcdh1F7BJK1 Nudt16l1-201ENSMUST00000050881 1269 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Pcdh1F7BJK1 Rpl21-202ENSMUST00000075453 899 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Pcdh1F7BJK1 C1qbp-201ENSMUST00000078528 1175 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Pcdh1F7BJK1 Jun-201ENSMUST00000107094 3189 ntAPPRIS P1 BASIC13.69□□□□□ -0.22
Pcdh1F7BJK1 Tmem255a-203ENSMUST00000089056 1745 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
Pcdh1F7BJK1 Gm4756-202ENSMUST00000208039 2344 ntAPPRIS P1 TSL 5 BASIC13.69□□□□□ -0.22
Pcdh1F7BJK1 Wdr45b-201ENSMUST00000026173 2321 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Pcdh1F7BJK1 Cspg5-201ENSMUST00000035058 3870 ntAPPRIS P2 TSL 1 (best) BASIC13.69□□□□□ -0.22
Pcdh1F7BJK1 Dnaja3-201ENSMUST00000060067 2648 ntAPPRIS P3 TSL 1 (best) BASIC13.69□□□□□ -0.22
Pcdh1F7BJK1 Cdc37l1-204ENSMUST00000224511 2944 ntAPPRIS ALT2 BASIC13.69□□□□□ -0.22
Pcdh1F7BJK1 Pcolce2-201ENSMUST00000015498 4438 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Pcdh1F7BJK1 Sirt5-206ENSMUST00000221481 1548 ntTSL 5 BASIC13.69□□□□□ -0.22
Pcdh1F7BJK1 Gm15512-201ENSMUST00000137359 2257 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
Pcdh1F7BJK1 Lap3-201ENSMUST00000046122 2267 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Pcdh1F7BJK1 Golim4-201ENSMUST00000038563 5546 ntAPPRIS P3 TSL 1 (best) BASIC13.68□□□□□ -0.22
Pcdh1F7BJK1 Pid1-207ENSMUST00000177458 2521 ntTSL 2 BASIC13.68□□□□□ -0.22
Pcdh1F7BJK1 Ptpn6-203ENSMUST00000171549 2226 ntAPPRIS ALT2 TSL 1 (best) BASIC13.68□□□□□ -0.22
Pcdh1F7BJK1 Kcnt1-213ENSMUST00000198204 4714 ntAPPRIS ALT2 TSL 5 BASIC13.68□□□□□ -0.22
Pcdh1F7BJK1 Hsd17b1-201ENSMUST00000019445 1339 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Pcdh1F7BJK1 Lrp11-201ENSMUST00000019931 3386 ntAPPRIS P2 TSL 1 (best) BASIC13.68□□□□□ -0.22
Pcdh1F7BJK1 Mapk8ip3-203ENSMUST00000115229 5603 ntAPPRIS ALT2 TSL 5 BASIC13.68□□□□□ -0.22
Pcdh1F7BJK1 Miip-202ENSMUST00000119975 1879 ntAPPRIS ALT2 TSL 1 (best) BASIC13.68□□□□□ -0.22
Pcdh1F7BJK1 Cep170-205ENSMUST00000192961 2708 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
Pcdh1F7BJK1 B3gnt7-201ENSMUST00000113306 2582 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Pcdh1F7BJK1 Npas3-204ENSMUST00000223358 3143 ntAPPRIS ALT2 TSL 1 (best) BASIC13.68□□□□□ -0.22
Pcdh1F7BJK1 H13-203ENSMUST00000109825 1063 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
Pcdh1F7BJK1 Tmem60-201ENSMUST00000115259 1147 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Pcdh1F7BJK1 Ndufa5-202ENSMUST00000118558 315 ntTSL 2 BASIC13.68□□□□□ -0.22
Pcdh1F7BJK1 Ffar2-203ENSMUST00000168528 1210 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Pcdh1F7BJK1 Tap1-206ENSMUST00000170086 2953 ntAPPRIS P3 TSL 1 (best) BASIC13.68□□□□□ -0.22
Pcdh1F7BJK1 Ighv6-1-201ENSMUST00000193612 343 ntBASIC13.68□□□□□ -0.22
Pcdh1F7BJK1 Prima1-201ENSMUST00000074416 909 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Pcdh1F7BJK1 Igdcc4-202ENSMUST00000077696 6361 ntAPPRIS ALT2 TSL 5 BASIC13.68□□□□□ -0.22
Pcdh1F7BJK1 Fthl17f-201ENSMUST00000097029 847 ntAPPRIS P1 BASIC13.68□□□□□ -0.22
Pcdh1F7BJK1 Sik1-201ENSMUST00000024839 4511 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Pcdh1F7BJK1 Cdcp1-201ENSMUST00000039229 5310 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Pcdh1F7BJK1 Endod1-201ENSMUST00000167549 4470 ntAPPRIS P2 TSL 1 (best) BASIC13.68□□□□□ -0.22
Pcdh1F7BJK1 Gm28496-202ENSMUST00000137742 2752 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
Pcdh1F7BJK1 Ftsj1-202ENSMUST00000115594 1529 ntTSL 5 BASIC13.68□□□□□ -0.22
Pcdh1F7BJK1 Foxa1-201ENSMUST00000044380 3191 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Pcdh1F7BJK1 Usp35-201ENSMUST00000139582 4262 ntAPPRIS P1 TSL 5 BASIC13.68□□□□□ -0.22
Pcdh1F7BJK1 Ddc-201ENSMUST00000066237 1922 ntAPPRIS P1 TSL 5 BASIC13.68□□□□□ -0.22
Pcdh1F7BJK1 Slc16a6-202ENSMUST00000070152 4219 ntAPPRIS P3 TSL 1 (best) BASIC13.68□□□□□ -0.22
Pcdh1F7BJK1 Rbbp9-201ENSMUST00000028915 2170 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Pcdh1F7BJK1 Spns1-202ENSMUST00000119754 2001 ntTSL 5 BASIC13.68□□□□□ -0.22
Pcdh1F7BJK1 Ccdc158-203ENSMUST00000150359 3353 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
Pcdh1F7BJK1 Clcnka-201ENSMUST00000042617 2428 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Pcdh1F7BJK1 Phyhip-201ENSMUST00000003561 2838 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Pcdh1F7BJK1 Tle1-202ENSMUST00000072695 3644 ntAPPRIS P2 TSL 1 (best) BASIC13.68□□□□□ -0.22
Pcdh1F7BJK1 Casp6-201ENSMUST00000029626 1456 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Pcdh1F7BJK1 Lrrc7-205ENSMUST00000200137 7321 ntAPPRIS P2 TSL 1 (best) BASIC13.67□□□□□ -0.22
Pcdh1F7BJK1 Gm2061-201ENSMUST00000180623 2761 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
Pcdh1F7BJK1 Majin-202ENSMUST00000113528 1562 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Pcdh1F7BJK1 Fgf13-203ENSMUST00000119833 2237 ntTSL 5 BASIC13.67□□□□□ -0.22
Pcdh1F7BJK1 Abr-203ENSMUST00000094012 5236 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
Pcdh1F7BJK1 Necab3-201ENSMUST00000000895 1829 ntAPPRIS P2 TSL 1 (best) BASIC13.67□□□□□ -0.22
Pcdh1F7BJK1 Tmed9-201ENSMUST00000109905 1420 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Pcdh1F7BJK1 Renbp-202ENSMUST00000116578 1418 ntAPPRIS P2 TSL 1 (best) BASIC13.67□□□□□ -0.22
Pcdh1F7BJK1 Gm8242-201ENSMUST00000193029 1420 ntBASIC13.67□□□□□ -0.22
Pcdh1F7BJK1 Tmem201-201ENSMUST00000054459 4631 ntAPPRIS ALT2 TSL 2 BASIC13.67□□□□□ -0.22
Pcdh1F7BJK1 Armc9-205ENSMUST00000131412 2160 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Pcdh1F7BJK1 Lce1j-201ENSMUST00000107304 420 ntAPPRIS P1 BASIC13.67□□□□□ -0.22
Pcdh1F7BJK1 Lyzl4-202ENSMUST00000120918 959 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Pcdh1F7BJK1 Gm7286-201ENSMUST00000182691 1007 ntBASIC13.67□□□□□ -0.22
Pcdh1F7BJK1 Rhebl1-201ENSMUST00000024518 1185 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Pcdh1F7BJK1 4933427J07Rik-201ENSMUST00000156275 1533 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
Pcdh1F7BJK1 Pqlc2-201ENSMUST00000053862 1532 ntAPPRIS P2 TSL 1 (best) BASIC13.67□□□□□ -0.22
Pcdh1F7BJK1 Crhbp-202ENSMUST00000221025 1779 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Pcdh1F7BJK1 Cgn-202ENSMUST00000107273 5016 ntAPPRIS P3 TSL 1 (best) BASIC13.67□□□□□ -0.22
Pcdh1F7BJK1 Nop56-202ENSMUST00000103198 1877 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Pcdh1F7BJK1 Atg9a-208ENSMUST00000189702 4110 ntAPPRIS P1 TSL 5 BASIC13.67□□□□□ -0.22
Pcdh1F7BJK1 Sigirr-206ENSMUST00000210167 1897 ntAPPRIS ALT2 TSL 1 (best) BASIC13.67□□□□□ -0.22
Pcdh1F7BJK1 Prrg4-201ENSMUST00000028593 2872 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Pcdh1F7BJK1 Wnt11-201ENSMUST00000067495 3451 ntAPPRIS P1 TSL 5 BASIC13.67□□□□□ -0.22
Pcdh1F7BJK1 Foxl1-201ENSMUST00000181609 2705 ntAPPRIS P1 BASIC13.67□□□□□ -0.22
Pcdh1F7BJK1 Nfe2l2-201ENSMUST00000102672 2475 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Pcdh1F7BJK1 Zbtb14-203ENSMUST00000112676 3909 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Pcdh1F7BJK1 Casc4-204ENSMUST00000110586 4032 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Pcdh1F7BJK1 Rbm26-203ENSMUST00000163499 4212 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
Pcdh1F7BJK1 Gm10518-201ENSMUST00000097454 1301 ntAPPRIS P1 BASIC13.66□□□□□ -0.22
Pcdh1F7BJK1 Neurod2-201ENSMUST00000041685 3142 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Pcdh1F7BJK1 Kif3a-201ENSMUST00000057330 2290 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
Pcdh1F7BJK1 Smtnl2-202ENSMUST00000108500 3572 ntAPPRIS ALT2 TSL 1 (best) BASIC13.66□□□□□ -0.22
Pcdh1F7BJK1 Lurap1l-201ENSMUST00000055922 3066 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Pcdh1F7BJK1 Adal-201ENSMUST00000028702 2471 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
Pcdh1F7BJK1 Ndufv2-203ENSMUST00000143987 1540 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Pcdh1F7BJK1 Dlx6-202ENSMUST00000160937 2216 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Pcdh1F7BJK1 Nab1-205ENSMUST00000186764 3640 ntAPPRIS ALT1 TSL 5 BASIC13.66□□□□□ -0.22
Pcdh1F7BJK1 Ankrd16-201ENSMUST00000056108 1618 ntAPPRIS P1 TSL 5 BASIC13.66□□□□□ -0.22
Pcdh1F7BJK1 Hist1h2bj-201ENSMUST00000110452 463 ntAPPRIS P1 BASIC13.66□□□□□ -0.22
Pcdh1F7BJK1 Hist1h2bp-202ENSMUST00000110473 621 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
Pcdh1F7BJK1 Gm16075-201ENSMUST00000135873 361 ntTSL 3 BASIC13.66□□□□□ -0.22
Pcdh1F7BJK1 Gm15138-201ENSMUST00000151778 379 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
Pcdh1F7BJK1 Flg-207ENSMUST00000180293 768 ntAPPRIS ALT2 BASIC13.66□□□□□ -0.22
Pcdh1F7BJK1 A430033K04Rik-204ENSMUST00000200521 1110 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
Pcdh1F7BJK1 Gm17808-201ENSMUST00000200859 894 ntBASIC13.66□□□□□ -0.22
Pcdh1F7BJK1 AL669916.2-201ENSMUST00000213219 358 ntTSL 2 BASIC13.66□□□□□ -0.22
Pcdh1F7BJK1 Hist1h2bm-201ENSMUST00000224651 524 ntAPPRIS P1 BASIC13.66□□□□□ -0.22
Retrieved 100 of 76,532 protein–RNA pairs in 20.8 ms