Protein–RNA interactions for Protein: F6WEU2

Ccdc188, Coiled-coil domain-containing 188, mousemouse

Predictions only

Length 249 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc188F6WEU2 Dap3-207ENSMUST00000173135 1409 ntAPPRIS ALT2 TSL 5 BASIC15.22■□□□□ 0.03
Ccdc188F6WEU2 Gm36065-202ENSMUST00000219654 1424 ntTSL 5 BASIC15.22■□□□□ 0.03
Ccdc188F6WEU2 Raxos1-201ENSMUST00000181100 2547 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
Ccdc188F6WEU2 Osbpl10-201ENSMUST00000046627 1872 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
Ccdc188F6WEU2 Rnf13-205ENSMUST00000198214 2027 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
Ccdc188F6WEU2 Ctdsp2-202ENSMUST00000105256 4817 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Ccdc188F6WEU2 Taco1-201ENSMUST00000002048 1383 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Ccdc188F6WEU2 Ginm1-204ENSMUST00000124838 1525 ntAPPRIS ALT2 TSL 1 (best) BASIC15.22■□□□□ 0.03
Ccdc188F6WEU2 Gbe1-206ENSMUST00000170464 2736 ntAPPRIS ALT2 TSL 5 BASIC15.22■□□□□ 0.03
Ccdc188F6WEU2 Dnm1-216ENSMUST00000201494 2732 ntTSL 5 BASIC15.22■□□□□ 0.03
Ccdc188F6WEU2 Rgl2-201ENSMUST00000047503 3252 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Ccdc188F6WEU2 Cdv3-207ENSMUST00000190226 3107 ntTSL 5 BASIC15.21■□□□□ 0.03
Ccdc188F6WEU2 Sema6c-214ENSMUST00000202315 2843 ntAPPRIS P3 TSL 1 (best) BASIC15.21■□□□□ 0.03
Ccdc188F6WEU2 Meis2-202ENSMUST00000074285 2844 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
Ccdc188F6WEU2 Sh2b3-201ENSMUST00000040308 2530 ntAPPRIS P3 TSL 1 (best) BASIC15.21■□□□□ 0.03
Ccdc188F6WEU2 Mfsd13a-202ENSMUST00000128041 2223 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Ccdc188F6WEU2 Fbxo27-201ENSMUST00000039998 1946 ntAPPRIS P3 TSL 1 (best) BASIC15.21■□□□□ 0.03
Ccdc188F6WEU2 Klhl34-201ENSMUST00000087157 1935 ntAPPRIS P1 BASIC15.21■□□□□ 0.03
Ccdc188F6WEU2 Cpd-201ENSMUST00000021201 7946 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Ccdc188F6WEU2 Slc25a19-201ENSMUST00000021089 2307 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Ccdc188F6WEU2 Fam69c-201ENSMUST00000052501 2153 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Ccdc188F6WEU2 Kat8-201ENSMUST00000033070 1579 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Ccdc188F6WEU2 Amacr-201ENSMUST00000070877 2577 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Ccdc188F6WEU2 Nadk2-202ENSMUST00000100789 3578 ntAPPRIS ALT2 TSL 5 BASIC15.21■□□□□ 0.03
Ccdc188F6WEU2 Gm23931-201ENSMUST00000103842 109 ntBASIC15.21■□□□□ 0.03
Ccdc188F6WEU2 Timm10b-202ENSMUST00000106780 671 ntAPPRIS P2 TSL 2 BASIC15.21■□□□□ 0.03
Ccdc188F6WEU2 Gfpt1-203ENSMUST00000113657 1200 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
Ccdc188F6WEU2 Rapgef3os2-201ENSMUST00000124374 920 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
Ccdc188F6WEU2 Mir7654-201ENSMUST00000185082 70 ntBASIC15.21■□□□□ 0.03
Ccdc188F6WEU2 Gm18934-201ENSMUST00000216671 1044 ntBASIC15.21■□□□□ 0.03
Ccdc188F6WEU2 Net1-207ENSMUST00000223258 597 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
Ccdc188F6WEU2 AC132317.1-201ENSMUST00000227227 962 ntBASIC15.21■□□□□ 0.03
Ccdc188F6WEU2 AC122459.1-201ENSMUST00000228373 885 ntBASIC15.21■□□□□ 0.03
Ccdc188F6WEU2 Polr2g-201ENSMUST00000096261 868 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Ccdc188F6WEU2 Tbc1d9-202ENSMUST00000093393 5334 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Ccdc188F6WEU2 Trim68-201ENSMUST00000082175 2388 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Ccdc188F6WEU2 Tpm1-214ENSMUST00000113701 1677 ntTSL 5 BASIC15.21■□□□□ 0.03
Ccdc188F6WEU2 Aatk-203ENSMUST00000103020 5687 ntAPPRIS P3 TSL 1 (best) BASIC15.21■□□□□ 0.03
Ccdc188F6WEU2 Slc30a4-202ENSMUST00000099457 3170 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
Ccdc188F6WEU2 Tbx21-201ENSMUST00000001484 2488 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.02
Ccdc188F6WEU2 Lrp8os3-201ENSMUST00000125464 1770 ntTSL 1 (best) BASIC15.21■□□□□ 0.02
Ccdc188F6WEU2 Gm11738-201ENSMUST00000134069 2158 ntTSL 1 (best) BASIC15.21■□□□□ 0.02
Ccdc188F6WEU2 Zscan30-202ENSMUST00000224144 1458 ntBASIC15.2■□□□□ 0.02
Ccdc188F6WEU2 Zhx1-202ENSMUST00000110168 5212 ntAPPRIS P1 TSL 5 BASIC15.2■□□□□ 0.02
Ccdc188F6WEU2 Cep57-208ENSMUST00000147115 2262 ntAPPRIS ALT2 TSL 1 (best) BASIC15.2■□□□□ 0.02
Ccdc188F6WEU2 Kdm2a-202ENSMUST00000075856 7242 ntAPPRIS P1 TSL 5 BASIC15.2■□□□□ 0.02
Ccdc188F6WEU2 Actr8-201ENSMUST00000016115 2119 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Ccdc188F6WEU2 AC069562.2-201ENSMUST00000224644 2146 ntBASIC15.2■□□□□ 0.02
Ccdc188F6WEU2 Galt-201ENSMUST00000084695 1595 ntAPPRIS P2 TSL 1 (best) BASIC15.2■□□□□ 0.02
Ccdc188F6WEU2 Ntn1-202ENSMUST00000108674 5874 ntAPPRIS P1 TSL 5 BASIC15.2■□□□□ 0.02
Ccdc188F6WEU2 Gm10461-201ENSMUST00000202073 4786 ntBASIC15.2■□□□□ 0.02
Ccdc188F6WEU2 Thumpd3-201ENSMUST00000032398 2163 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Ccdc188F6WEU2 Erich6-201ENSMUST00000041115 2195 ntAPPRIS P1 TSL 5 BASIC15.2■□□□□ 0.02
Ccdc188F6WEU2 Kmt5c-201ENSMUST00000098853 2189 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Ccdc188F6WEU2 Gtdc1-202ENSMUST00000100127 2422 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
Ccdc188F6WEU2 Bmp8a-201ENSMUST00000040496 2405 ntAPPRIS ALT2 TSL 1 (best) BASIC15.2■□□□□ 0.02
Ccdc188F6WEU2 Gm10327-201ENSMUST00000105222 1002 ntBASIC15.2■□□□□ 0.02
Ccdc188F6WEU2 Apip-201ENSMUST00000011055 919 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Ccdc188F6WEU2 Cryba4-203ENSMUST00000112385 808 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Ccdc188F6WEU2 Gm6222-201ENSMUST00000120787 396 ntBASIC15.2■□□□□ 0.02
Ccdc188F6WEU2 Ssty1-201ENSMUST00000180056 699 ntAPPRIS P1 BASIC15.2■□□□□ 0.02
Ccdc188F6WEU2 1700120C18Rik-201ENSMUST00000182952 985 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
Ccdc188F6WEU2 Gm29310-201ENSMUST00000185468 696 ntBASIC15.2■□□□□ 0.02
Ccdc188F6WEU2 Gm21825-201ENSMUST00000185728 696 ntBASIC15.2■□□□□ 0.02
Ccdc188F6WEU2 Gm29109-201ENSMUST00000185895 696 ntBASIC15.2■□□□□ 0.02
Ccdc188F6WEU2 Gm21896-201ENSMUST00000186520 696 ntBASIC15.2■□□□□ 0.02
Ccdc188F6WEU2 Gm21873-201ENSMUST00000186728 696 ntBASIC15.2■□□□□ 0.02
Ccdc188F6WEU2 Gm21794-201ENSMUST00000187056 696 ntBASIC15.2■□□□□ 0.02
Ccdc188F6WEU2 Gm21880-201ENSMUST00000187275 696 ntBASIC15.2■□□□□ 0.02
Ccdc188F6WEU2 Gm21826-201ENSMUST00000187451 696 ntBASIC15.2■□□□□ 0.02
Ccdc188F6WEU2 Gm21198-201ENSMUST00000188393 696 ntBASIC15.2■□□□□ 0.02
Ccdc188F6WEU2 Gm21749-201ENSMUST00000189343 696 ntBASIC15.2■□□□□ 0.02
Ccdc188F6WEU2 Gm21901-201ENSMUST00000189568 696 ntBASIC15.2■□□□□ 0.02
Ccdc188F6WEU2 Gm29424-201ENSMUST00000189716 696 ntBASIC15.2■□□□□ 0.02
Ccdc188F6WEU2 Gm28599-201ENSMUST00000189838 694 ntBASIC15.2■□□□□ 0.02
Ccdc188F6WEU2 Gm21867-201ENSMUST00000189917 696 ntBASIC15.2■□□□□ 0.02
Ccdc188F6WEU2 Gm29269-201ENSMUST00000190087 696 ntBASIC15.2■□□□□ 0.02
Ccdc188F6WEU2 Gm21722-201ENSMUST00000190153 696 ntBASIC15.2■□□□□ 0.02
Ccdc188F6WEU2 Gm28423-201ENSMUST00000190701 696 ntBASIC15.2■□□□□ 0.02
Ccdc188F6WEU2 Gm21899-201ENSMUST00000190745 696 ntBASIC15.2■□□□□ 0.02
Ccdc188F6WEU2 Gm21910-201ENSMUST00000191163 696 ntBASIC15.2■□□□□ 0.02
Ccdc188F6WEU2 Gm21849-201ENSMUST00000191571 696 ntBASIC15.2■□□□□ 0.02
Ccdc188F6WEU2 Gm28678-201ENSMUST00000191593 696 ntBASIC15.2■□□□□ 0.02
Ccdc188F6WEU2 Gm20910-201ENSMUST00000193268 696 ntBASIC15.2■□□□□ 0.02
Ccdc188F6WEU2 Gm21871-201ENSMUST00000194621 696 ntBASIC15.2■□□□□ 0.02
Ccdc188F6WEU2 Gm19710-201ENSMUST00000200257 640 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
Ccdc188F6WEU2 Gm40977-203ENSMUST00000222324 886 ntTSL 2 BASIC15.2■□□□□ 0.02
Ccdc188F6WEU2 Trim24-201ENSMUST00000031859 4042 ntAPPRIS P3 TSL 1 (best) BASIC15.2■□□□□ 0.02
Ccdc188F6WEU2 Dph1-201ENSMUST00000044949 2139 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Ccdc188F6WEU2 Kat2b-ps-201ENSMUST00000128468 2490 ntBASIC15.2■□□□□ 0.02
Ccdc188F6WEU2 Scrib-202ENSMUST00000063747 5440 ntAPPRIS ALT2 TSL 1 (best) BASIC15.2■□□□□ 0.02
Ccdc188F6WEU2 Col27a1-201ENSMUST00000036300 7612 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Ccdc188F6WEU2 Gapvd1-203ENSMUST00000113099 5758 ntAPPRIS ALT2 TSL 5 BASIC15.2■□□□□ 0.02
Ccdc188F6WEU2 Dclk2-208ENSMUST00000194452 2066 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
Ccdc188F6WEU2 Tfap2a-208ENSMUST00000224999 2058 ntAPPRIS ALT1 BASIC15.2■□□□□ 0.02
Ccdc188F6WEU2 Sclt1-201ENSMUST00000026866 3005 ntAPPRIS P1 TSL 5 BASIC15.19■□□□□ 0.02
Ccdc188F6WEU2 Snx27-201ENSMUST00000029783 6261 ntAPPRIS ALT1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Ccdc188F6WEU2 Rhog-202ENSMUST00000106923 1321 ntAPPRIS P1 TSL 5 BASIC15.19■□□□□ 0.02
Ccdc188F6WEU2 Rflna-201ENSMUST00000036109 1681 ntAPPRIS P1 TSL 5 BASIC15.19■□□□□ 0.02
Ccdc188F6WEU2 4930425O10Rik-201ENSMUST00000197761 1418 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
Retrieved 100 of 76,532 protein–RNA pairs in 36.7 ms