Protein–RNA interactions for Protein: E9Q9Y3

Ccdc7b, Coiled-coil domain-containing 7B, mousemouse

Predictions only

Length 381 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc7bE9Q9Y3 Fstl1-201ENSMUST00000114763 3789 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Ccdc7bE9Q9Y3 Csnk2a2-201ENSMUST00000056919 3773 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Ccdc7bE9Q9Y3 Synj2-210ENSMUST00000115791 5051 ntAPPRIS ALT2 TSL 1 (best) BASIC14.24□□□□□ -0.13
Ccdc7bE9Q9Y3 Anxa4-201ENSMUST00000001187 2002 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Ccdc7bE9Q9Y3 Alas1-207ENSMUST00000141118 3399 ntAPPRIS P2 TSL 5 BASIC14.24□□□□□ -0.13
Ccdc7bE9Q9Y3 Ddc-210ENSMUST00000178704 2018 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Ccdc7bE9Q9Y3 Pim1-201ENSMUST00000024811 2638 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Ccdc7bE9Q9Y3 Prkag1-201ENSMUST00000168846 1638 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Ccdc7bE9Q9Y3 Fam124a-201ENSMUST00000039064 3558 ntAPPRIS P1 TSL 5 BASIC14.24□□□□□ -0.13
Ccdc7bE9Q9Y3 Cldn7-203ENSMUST00000108596 664 ntTSL 3 BASIC14.24□□□□□ -0.13
Ccdc7bE9Q9Y3 Unc5a-202ENSMUST00000109994 3827 ntAPPRIS ALT2 TSL 1 (best) BASIC14.24□□□□□ -0.13
Ccdc7bE9Q9Y3 Gmnn-202ENSMUST00000110382 963 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Ccdc7bE9Q9Y3 Fgf20-202ENSMUST00000118639 587 ntTSL 3 BASIC14.24□□□□□ -0.13
Ccdc7bE9Q9Y3 Gm12644-201ENSMUST00000119935 606 ntBASIC14.24□□□□□ -0.13
Ccdc7bE9Q9Y3 Psma3-204ENSMUST00000160864 859 ntTSL 5 BASIC14.24□□□□□ -0.13
Ccdc7bE9Q9Y3 Gm25745-201ENSMUST00000174945 133 ntBASIC14.24□□□□□ -0.13
Ccdc7bE9Q9Y3 Vsig2-201ENSMUST00000002008 1166 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Ccdc7bE9Q9Y3 Stard7-201ENSMUST00000110374 1530 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Ccdc7bE9Q9Y3 Nap1l5-201ENSMUST00000059539 1844 ntAPPRIS P1 BASIC14.24□□□□□ -0.13
Ccdc7bE9Q9Y3 Map6d1-201ENSMUST00000040880 3273 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Ccdc7bE9Q9Y3 Zfp362-201ENSMUST00000071108 2674 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Ccdc7bE9Q9Y3 Ak1-203ENSMUST00000113278 2085 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Ccdc7bE9Q9Y3 Slc6a11-201ENSMUST00000032451 4132 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Ccdc7bE9Q9Y3 Scn4b-201ENSMUST00000060125 4982 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Ccdc7bE9Q9Y3 Pex3-202ENSMUST00000105539 1961 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Ccdc7bE9Q9Y3 Fam71a-201ENSMUST00000171798 2234 ntAPPRIS P1 BASIC14.23□□□□□ -0.13
Ccdc7bE9Q9Y3 Gtf2h5-201ENSMUST00000039487 2245 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Ccdc7bE9Q9Y3 Ppp2r1a-201ENSMUST00000007708 2410 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Ccdc7bE9Q9Y3 Sept8-202ENSMUST00000117061 4563 ntAPPRIS P3 TSL 1 (best) BASIC14.23□□□□□ -0.13
Ccdc7bE9Q9Y3 Erbb2-201ENSMUST00000058295 5012 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Ccdc7bE9Q9Y3 Hbegf-201ENSMUST00000025363 2373 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Ccdc7bE9Q9Y3 Snph-204ENSMUST00000109877 3367 ntAPPRIS ALT2 TSL 1 (best) BASIC14.23□□□□□ -0.13
Ccdc7bE9Q9Y3 Tmem161a-214ENSMUST00000182980 2080 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Ccdc7bE9Q9Y3 Ttc13-210ENSMUST00000214828 3301 ntAPPRIS P1 TSL 5 BASIC14.23□□□□□ -0.13
Ccdc7bE9Q9Y3 Rbmx-206ENSMUST00000143310 1296 ntTSL 5 BASIC14.23□□□□□ -0.13
Ccdc7bE9Q9Y3 Tsfm-207ENSMUST00000152054 655 ntTSL 3 BASIC14.23□□□□□ -0.13
Ccdc7bE9Q9Y3 Tulp3-205ENSMUST00000157005 1053 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Ccdc7bE9Q9Y3 Gm17112-201ENSMUST00000163194 432 ntTSL 3 BASIC14.23□□□□□ -0.13
Ccdc7bE9Q9Y3 4930428E07Rik-201ENSMUST00000222132 920 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Ccdc7bE9Q9Y3 Gpank1-201ENSMUST00000052167 1295 ntAPPRIS P3 TSL 1 (best) BASIC14.23□□□□□ -0.13
Ccdc7bE9Q9Y3 Cr1l-208ENSMUST00000194111 1501 ntAPPRIS ALT2 TSL 1 (best) BASIC14.23□□□□□ -0.13
Ccdc7bE9Q9Y3 Loxl2-201ENSMUST00000022660 5316 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Ccdc7bE9Q9Y3 Ubb-201ENSMUST00000019649 1499 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Ccdc7bE9Q9Y3 Cnksr3-201ENSMUST00000015346 3447 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Ccdc7bE9Q9Y3 Sox17-201ENSMUST00000027035 3127 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Ccdc7bE9Q9Y3 B3gnt4-201ENSMUST00000031384 1423 ntAPPRIS P1 BASIC14.23□□□□□ -0.13
Ccdc7bE9Q9Y3 Zfp395-201ENSMUST00000066994 4229 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Ccdc7bE9Q9Y3 AL691505.1-201ENSMUST00000219965 1618 ntTSL 5 BASIC14.23□□□□□ -0.13
Ccdc7bE9Q9Y3 H2-K1-201ENSMUST00000025181 1605 ntAPPRIS P3 TSL 1 (best) BASIC14.23□□□□□ -0.13
Ccdc7bE9Q9Y3 Map6-203ENSMUST00000122101 3233 ntAPPRIS ALT2 TSL 1 (best) BASIC14.22□□□□□ -0.13
Ccdc7bE9Q9Y3 Med7-203ENSMUST00000109232 2547 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Ccdc7bE9Q9Y3 Hcfc2-201ENSMUST00000020478 3422 ntAPPRIS P1 TSL 5 BASIC14.22□□□□□ -0.13
Ccdc7bE9Q9Y3 Gm4353-201ENSMUST00000111755 1559 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Ccdc7bE9Q9Y3 Nup35-201ENSMUST00000028382 1559 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Ccdc7bE9Q9Y3 Miga1-204ENSMUST00000199334 4024 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
Ccdc7bE9Q9Y3 Synm-202ENSMUST00000074233 7818 ntAPPRIS P4 TSL 1 (best) BASIC14.22□□□□□ -0.13
Ccdc7bE9Q9Y3 Arf3-201ENSMUST00000053183 3579 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Ccdc7bE9Q9Y3 Sidt2-201ENSMUST00000038488 4248 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Ccdc7bE9Q9Y3 Gdpd2-202ENSMUST00000113744 2427 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Ccdc7bE9Q9Y3 Exo5-204ENSMUST00000177880 1969 ntAPPRIS P1 TSL 2 BASIC14.22□□□□□ -0.13
Ccdc7bE9Q9Y3 Exo5-201ENSMUST00000030375 1996 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Ccdc7bE9Q9Y3 Camsap2-202ENSMUST00000192001 6329 ntAPPRIS ALT2 TSL 1 (best) BASIC14.22□□□□□ -0.13
Ccdc7bE9Q9Y3 Hmgn1-201ENSMUST00000050884 2174 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Ccdc7bE9Q9Y3 Fbxw7-204ENSMUST00000107679 4473 ntAPPRIS ALT1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Ccdc7bE9Q9Y3 Bex1-203ENSMUST00000113120 718 ntAPPRIS P1 TSL 3 BASIC14.22□□□□□ -0.13
Ccdc7bE9Q9Y3 Pgam1-ps2-201ENSMUST00000117129 765 ntBASIC14.22□□□□□ -0.13
Ccdc7bE9Q9Y3 Rasl2-9-201ENSMUST00000147835 1013 ntAPPRIS P1 BASIC14.22□□□□□ -0.13
Ccdc7bE9Q9Y3 Gm20478-201ENSMUST00000173648 1031 ntTSL 3 BASIC14.22□□□□□ -0.13
Ccdc7bE9Q9Y3 Gm27741-201ENSMUST00000185060 237 ntBASIC14.22□□□□□ -0.13
Ccdc7bE9Q9Y3 Hs3st2-202ENSMUST00000206880 1149 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
Ccdc7bE9Q9Y3 Gm40977-203ENSMUST00000222324 886 ntTSL 2 BASIC14.22□□□□□ -0.13
Ccdc7bE9Q9Y3 Tmem242-201ENSMUST00000005053 948 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Ccdc7bE9Q9Y3 Gm9857-201ENSMUST00000050914 393 ntAPPRIS P1 BASIC14.22□□□□□ -0.13
Ccdc7bE9Q9Y3 Ylpm1-207ENSMUST00000168977 4893 ntAPPRIS ALT2 TSL 5 BASIC14.22□□□□□ -0.13
Ccdc7bE9Q9Y3 Clip2-201ENSMUST00000036999 4893 ntAPPRIS ALT2 TSL 1 (best) BASIC14.22□□□□□ -0.13
Ccdc7bE9Q9Y3 Fam103a1-201ENSMUST00000042166 1452 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Ccdc7bE9Q9Y3 Zfp821-203ENSMUST00000212000 2081 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Ccdc7bE9Q9Y3 Tpr-203ENSMUST00000124973 7430 ntAPPRIS P2 TSL 1 (best) BASIC14.22□□□□□ -0.13
Ccdc7bE9Q9Y3 Rnf123-201ENSMUST00000047746 4722 ntAPPRIS ALT2 TSL 5 BASIC14.22□□□□□ -0.13
Ccdc7bE9Q9Y3 Pqlc2-205ENSMUST00000172747 1405 ntAPPRIS P2 TSL 5 BASIC14.22□□□□□ -0.13
Ccdc7bE9Q9Y3 Parm1-201ENSMUST00000040576 5068 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Ccdc7bE9Q9Y3 Bnipl-202ENSMUST00000107195 1810 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Ccdc7bE9Q9Y3 Hoxb8-201ENSMUST00000052650 2635 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Ccdc7bE9Q9Y3 Tmed8-201ENSMUST00000037418 7409 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Ccdc7bE9Q9Y3 Col5a1-201ENSMUST00000028280 8406 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Ccdc7bE9Q9Y3 Tbc1d22b-201ENSMUST00000048677 3592 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Ccdc7bE9Q9Y3 Repin1-207ENSMUST00000163452 2959 ntAPPRIS P3 TSL 1 (best) BASIC14.22□□□□□ -0.13
Ccdc7bE9Q9Y3 Camk1g-204ENSMUST00000169907 1968 ntTSL 5 BASIC14.22□□□□□ -0.13
Ccdc7bE9Q9Y3 Camk2b-205ENSMUST00000093355 1973 ntTSL 5 BASIC14.22□□□□□ -0.13
Ccdc7bE9Q9Y3 Asf1b-201ENSMUST00000005607 1788 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Ccdc7bE9Q9Y3 Ctdp1-201ENSMUST00000036229 3713 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Ccdc7bE9Q9Y3 G2e3-202ENSMUST00000119211 2926 ntAPPRIS ALT2 TSL 1 (best) BASIC14.21□□□□□ -0.13
Ccdc7bE9Q9Y3 Snn-201ENSMUST00000089011 2902 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Ccdc7bE9Q9Y3 Kif22-201ENSMUST00000032915 2115 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Ccdc7bE9Q9Y3 A330040F15Rik-202ENSMUST00000224046 1918 ntBASIC14.21□□□□□ -0.13
Ccdc7bE9Q9Y3 Unc5d-202ENSMUST00000209401 3081 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
Ccdc7bE9Q9Y3 Unc5d-203ENSMUST00000210298 3060 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
Ccdc7bE9Q9Y3 Unc5d-205ENSMUST00000211448 3087 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
Ccdc7bE9Q9Y3 Gm15559-201ENSMUST00000132267 2260 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
Ccdc7bE9Q9Y3 Gm37728-201ENSMUST00000195025 2292 ntBASIC14.21□□□□□ -0.13
Retrieved 100 of 76,532 protein–RNA pairs in 82.8 ms