Protein–RNA interactions for Protein: E9PWQ3

Col6a3, Collagen, type VI, alpha 3, mousemouse

Predictions only

Length 3,284 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col6a3E9PWQ3 Dusp13-204ENSMUST00000120984 976 ntAPPRIS ALT1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Col6a3E9PWQ3 Gm6257-201ENSMUST00000163864 910 ntBASIC14.95□□□□□ -0.02
Col6a3E9PWQ3 Cd180-203ENSMUST00000170878 842 ntTSL 3 BASIC14.95□□□□□ -0.02
Col6a3E9PWQ3 Cd180-205ENSMUST00000172138 518 ntTSL 2 BASIC14.95□□□□□ -0.02
Col6a3E9PWQ3 Il6st-208ENSMUST00000184311 2985 ntAPPRIS P2 TSL 5 BASIC14.95□□□□□ -0.02
Col6a3E9PWQ3 Gm37753-201ENSMUST00000192178 439 ntTSL 2 BASIC14.95□□□□□ -0.02
Col6a3E9PWQ3 Gm45865-201ENSMUST00000211815 945 ntBASIC14.95□□□□□ -0.02
Col6a3E9PWQ3 Sftpa1-201ENSMUST00000022314 851 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Col6a3E9PWQ3 AC156016.3-201ENSMUST00000228623 344 ntBASIC14.95□□□□□ -0.02
Col6a3E9PWQ3 Rad52-201ENSMUST00000032269 1617 ntAPPRIS P3 TSL 1 (best) BASIC14.95□□□□□ -0.02
Col6a3E9PWQ3 Golga5-201ENSMUST00000021609 3390 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Col6a3E9PWQ3 Pip4k2a-201ENSMUST00000006912 3477 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Col6a3E9PWQ3 Tmem204-201ENSMUST00000024984 1846 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Col6a3E9PWQ3 Acadvl-201ENSMUST00000018718 2020 ntAPPRIS ALT2 TSL 5 BASIC14.95□□□□□ -0.02
Col6a3E9PWQ3 6030419C18Rik-202ENSMUST00000216294 1601 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Col6a3E9PWQ3 Cd27-202ENSMUST00000112281 832 ntTSL 3 BASIC14.95□□□□□ -0.02
Col6a3E9PWQ3 Gsto2-202ENSMUST00000120645 1277 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Col6a3E9PWQ3 Neat1-203ENSMUST00000174829 1030 ntTSL 5 BASIC14.95□□□□□ -0.02
Col6a3E9PWQ3 Gm27631-201ENSMUST00000184163 466 ntBASIC14.95□□□□□ -0.02
Col6a3E9PWQ3 Gm9826-201ENSMUST00000029124 1299 ntBASIC14.95□□□□□ -0.02
Col6a3E9PWQ3 Klhl34-201ENSMUST00000087157 1935 ntAPPRIS P1 BASIC14.95□□□□□ -0.02
Col6a3E9PWQ3 Abhd5-202ENSMUST00000111497 2576 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
Col6a3E9PWQ3 Krt84-201ENSMUST00000023720 2570 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Col6a3E9PWQ3 Gm17705-201ENSMUST00000172285 1555 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
Col6a3E9PWQ3 Serf2-204ENSMUST00000139253 3056 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Col6a3E9PWQ3 Srf-201ENSMUST00000015749 4093 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Col6a3E9PWQ3 Gdpd2-202ENSMUST00000113744 2427 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Col6a3E9PWQ3 Spata3-211ENSMUST00000159876 760 ntAPPRIS ALT2 TSL 5 BASIC14.94□□□□□ -0.02
Col6a3E9PWQ3 Gm16505-201ENSMUST00000179981 232 ntBASIC14.94□□□□□ -0.02
Col6a3E9PWQ3 Gm7286-201ENSMUST00000182691 1007 ntBASIC14.94□□□□□ -0.02
Col6a3E9PWQ3 Gm38002-201ENSMUST00000193255 180 ntBASIC14.94□□□□□ -0.02
Col6a3E9PWQ3 Gm7446-201ENSMUST00000221035 1240 ntBASIC14.94□□□□□ -0.02
Col6a3E9PWQ3 Hist1h2aa-201ENSMUST00000072391 390 ntAPPRIS P1 BASIC14.94□□□□□ -0.02
Col6a3E9PWQ3 Rec114-201ENSMUST00000098674 883 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Col6a3E9PWQ3 Foxp1-230ENSMUST00000177437 2468 ntAPPRIS P2 TSL 1 (best) BASIC14.94□□□□□ -0.02
Col6a3E9PWQ3 Sytl3-201ENSMUST00000097430 2100 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Col6a3E9PWQ3 Pdlim7-206ENSMUST00000131306 1915 ntTSL 2 BASIC14.94□□□□□ -0.02
Col6a3E9PWQ3 Ccdc30-201ENSMUST00000044781 1464 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
Col6a3E9PWQ3 Mfsd13a-202ENSMUST00000128041 2223 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Col6a3E9PWQ3 Dlk1-202ENSMUST00000109841 879 ntTSL 5 BASIC14.94□□□□□ -0.02
Col6a3E9PWQ3 Plch2-212ENSMUST00000186598 2119 ntTSL 5 BASIC14.94□□□□□ -0.02
Col6a3E9PWQ3 AC165157.4-201ENSMUST00000220587 139 ntBASIC14.94□□□□□ -0.02
Col6a3E9PWQ3 Col9a3-203ENSMUST00000132527 3046 ntAPPRIS P1 TSL 5 BASIC14.94□□□□□ -0.02
Col6a3E9PWQ3 Map3k10-201ENSMUST00000036453 3682 ntAPPRIS P2 TSL 1 (best) BASIC14.94□□□□□ -0.02
Col6a3E9PWQ3 Ddx39b-203ENSMUST00000173731 2848 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Col6a3E9PWQ3 Hipk1-201ENSMUST00000029438 4185 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Col6a3E9PWQ3 Tmx1-201ENSMUST00000021471 2795 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Col6a3E9PWQ3 Dnase1l2-201ENSMUST00000088506 1921 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Col6a3E9PWQ3 Sgsm1-204ENSMUST00000112325 2274 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
Col6a3E9PWQ3 Rsrp1-201ENSMUST00000078084 1749 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Col6a3E9PWQ3 Crybb3-203ENSMUST00000118226 892 ntAPPRIS P1 TSL 3 BASIC14.93□□□□□ -0.02
Col6a3E9PWQ3 Ispd-201ENSMUST00000062041 2690 ntAPPRIS P2 TSL 1 (best) BASIC14.93□□□□□ -0.02
Col6a3E9PWQ3 Mbl1-202ENSMUST00000225792 1563 ntAPPRIS P1 BASIC14.93□□□□□ -0.02
Col6a3E9PWQ3 Trabd-201ENSMUST00000081702 2439 ntAPPRIS P2 TSL 1 (best) BASIC14.93□□□□□ -0.02
Col6a3E9PWQ3 Bad-201ENSMUST00000025910 1451 ntAPPRIS P3 TSL 1 (best) BASIC14.93□□□□□ -0.02
Col6a3E9PWQ3 Il1rn-201ENSMUST00000114482 1986 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Col6a3E9PWQ3 Wac-216ENSMUST00000171486 1608 ntTSL 5 BASIC14.93□□□□□ -0.02
Col6a3E9PWQ3 Apoo-203ENSMUST00000113897 1218 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
Col6a3E9PWQ3 4930425O10Rik-201ENSMUST00000197761 1418 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
Col6a3E9PWQ3 Cdc23-201ENSMUST00000025228 2084 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
Col6a3E9PWQ3 Zfp384-202ENSMUST00000054553 2451 ntTSL 5 BASIC14.93□□□□□ -0.02
Col6a3E9PWQ3 Ccdc154-202ENSMUST00000182292 1989 ntAPPRIS ALT2 TSL 5 BASIC14.93□□□□□ -0.02
Col6a3E9PWQ3 Arpc4-201ENSMUST00000156898 2270 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Col6a3E9PWQ3 Zfyve19-201ENSMUST00000090174 2008 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Col6a3E9PWQ3 Mterf4-202ENSMUST00000112942 1525 ntTSL 2 BASIC14.93□□□□□ -0.02
Col6a3E9PWQ3 Cdk4-202ENSMUST00000120226 714 ntTSL 5 BASIC14.93□□□□□ -0.02
Col6a3E9PWQ3 Gm15738-202ENSMUST00000140892 427 ntTSL 2 BASIC14.93□□□□□ -0.02
Col6a3E9PWQ3 A930009A15Rik-201ENSMUST00000173620 1001 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Col6a3E9PWQ3 Gm3222-201ENSMUST00000071282 990 ntBASIC14.93□□□□□ -0.02
Col6a3E9PWQ3 Mir433-201ENSMUST00000093564 124 ntBASIC14.93□□□□□ -0.02
Col6a3E9PWQ3 Dusp23-201ENSMUST00000027826 1410 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Col6a3E9PWQ3 Anapc5-218ENSMUST00000200645 2404 ntAPPRIS ALT2 TSL 1 (best) BASIC14.93□□□□□ -0.02
Col6a3E9PWQ3 Antxr2-202ENSMUST00000199088 2739 ntAPPRIS ALT2 TSL 1 (best) BASIC14.93□□□□□ -0.02
Col6a3E9PWQ3 Dhrs1-201ENSMUST00000002403 1477 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Col6a3E9PWQ3 Ipp-202ENSMUST00000106479 2118 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Col6a3E9PWQ3 Fggy-203ENSMUST00000107091 1395 ntTSL 5 BASIC14.92□□□□□ -0.02
Col6a3E9PWQ3 Chpf-202ENSMUST00000094818 3065 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
Col6a3E9PWQ3 Gm13032-201ENSMUST00000151848 2001 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
Col6a3E9PWQ3 Dera-201ENSMUST00000087675 1729 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Col6a3E9PWQ3 Shf-202ENSMUST00000110530 910 ntAPPRIS ALT2 TSL 5 BASIC14.92□□□□□ -0.02
Col6a3E9PWQ3 Gm8318-201ENSMUST00000182954 872 ntBASIC14.92□□□□□ -0.02
Col6a3E9PWQ3 Ubp1-202ENSMUST00000084885 3850 ntAPPRIS P4 TSL 5 BASIC14.92□□□□□ -0.02
Col6a3E9PWQ3 Lonp1-201ENSMUST00000047226 2963 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Col6a3E9PWQ3 Ing1-202ENSMUST00000209565 1971 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
Col6a3E9PWQ3 Ccser2-208ENSMUST00000183007 1293 ntTSL 5 BASIC14.92□□□□□ -0.02
Col6a3E9PWQ3 Gm27486-201ENSMUST00000184923 80 ntBASIC14.92□□□□□ -0.02
Col6a3E9PWQ3 Tmem210-201ENSMUST00000028340 516 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Col6a3E9PWQ3 Cma2-201ENSMUST00000089555 947 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Col6a3E9PWQ3 Eef1d-203ENSMUST00000089680 973 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
Col6a3E9PWQ3 Gm10702-201ENSMUST00000098929 1268 ntBASIC14.92□□□□□ -0.02
Col6a3E9PWQ3 Rnf13-205ENSMUST00000198214 2027 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
Col6a3E9PWQ3 Mapk14-201ENSMUST00000004990 3547 ntAPPRIS ALT1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Col6a3E9PWQ3 Mapk14-202ENSMUST00000062694 3547 ntAPPRIS P3 TSL 1 (best) BASIC14.92□□□□□ -0.02
Col6a3E9PWQ3 Trap1-201ENSMUST00000006137 2320 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Col6a3E9PWQ3 Bud23-203ENSMUST00000111205 1169 ntAPPRIS ALT2 TSL 3 BASIC14.91□□□□□ -0.02
Col6a3E9PWQ3 Pmepa1os-201ENSMUST00000150185 680 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
Col6a3E9PWQ3 3300002P13Rik-201ENSMUST00000204020 1092 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
Col6a3E9PWQ3 Upk3bl-201ENSMUST00000006303 1045 ntAPPRIS P2 TSL 1 (best) BASIC14.91□□□□□ -0.02
Col6a3E9PWQ3 Gulp1-203ENSMUST00000160854 1399 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
Col6a3E9PWQ3 Phtf1-203ENSMUST00000090685 3006 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
Retrieved 100 of 76,532 protein–RNA pairs in 24.1 ms