Protein–RNA interactions for Protein: E9PVD3

Dchs1, Protocadherin-16, mousemouse

Predictions only

Length 3,291 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Dchs1E9PVD3 Ddx20-201ENSMUST00000090680 2905 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Dchs1E9PVD3 Wnt4-201ENSMUST00000045747 4194 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Dchs1E9PVD3 Slc37a4-203ENSMUST00000213388 2344 ntAPPRIS P2 TSL 1 (best) BASIC13.28□□□□□ -0.28
Dchs1E9PVD3 Gm26839-201ENSMUST00000180686 842 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
Dchs1E9PVD3 Shd-206ENSMUST00000225145 998 ntBASIC13.28□□□□□ -0.28
Dchs1E9PVD3 Spryd3-203ENSMUST00000154032 2456 ntAPPRIS P1 TSL 5 BASIC13.28□□□□□ -0.28
Dchs1E9PVD3 Akp-ps1-202ENSMUST00000212812 1959 ntTSL 5 BASIC13.28□□□□□ -0.28
Dchs1E9PVD3 Nhlrc4-201ENSMUST00000085027 2142 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Dchs1E9PVD3 Gm43703-201ENSMUST00000200523 763 ntBASIC13.28□□□□□ -0.28
Dchs1E9PVD3 Gm4129-201ENSMUST00000220083 625 ntTSL 3 BASIC13.28□□□□□ -0.28
Dchs1E9PVD3 Haus1-201ENSMUST00000048192 1004 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Dchs1E9PVD3 Dennd5a-202ENSMUST00000106722 4862 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
Dchs1E9PVD3 Gm36445-201ENSMUST00000209344 1432 ntTSL 5 BASIC13.28□□□□□ -0.28
Dchs1E9PVD3 Pcolce-201ENSMUST00000031731 1626 ntAPPRIS P2 TSL 1 (best) BASIC13.28□□□□□ -0.28
Dchs1E9PVD3 Trim50-201ENSMUST00000065785 1803 ntAPPRIS P2 TSL 1 (best) BASIC13.28□□□□□ -0.28
Dchs1E9PVD3 H2-Q4-201ENSMUST00000081435 1793 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Dchs1E9PVD3 Mtg2-201ENSMUST00000087563 1346 ntAPPRIS P1 TSL 5 BASIC13.28□□□□□ -0.28
Dchs1E9PVD3 Hspb8-201ENSMUST00000036991 1816 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Dchs1E9PVD3 Hist1h4n-201ENSMUST00000102979 430 ntAPPRIS P1 BASIC13.28□□□□□ -0.28
Dchs1E9PVD3 Abhd11-202ENSMUST00000111216 972 ntTSL 3 BASIC13.28□□□□□ -0.28
Dchs1E9PVD3 4933437G19Rik-201ENSMUST00000197910 1178 ntBASIC13.28□□□□□ -0.28
Dchs1E9PVD3 Nupr1-201ENSMUST00000032961 829 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Dchs1E9PVD3 Gm45351-201ENSMUST00000210683 2545 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
Dchs1E9PVD3 Itpk1-201ENSMUST00000046518 2918 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
Dchs1E9PVD3 Sfta3-ps-205ENSMUST00000220379 2187 ntTSL 1 (best) BASIC13.27□□□□□ -0.28
Dchs1E9PVD3 Stk11-202ENSMUST00000105370 1474 ntTSL 1 (best) BASIC13.27□□□□□ -0.28
Dchs1E9PVD3 AC154412.1-201ENSMUST00000226540 2786 ntBASIC13.27□□□□□ -0.28
Dchs1E9PVD3 2310011J03Rik-201ENSMUST00000020341 1649 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
Dchs1E9PVD3 Zfp362-201ENSMUST00000071108 2674 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
Dchs1E9PVD3 Smarcc1-204ENSMUST00000197984 3538 ntAPPRIS ALT2 TSL 1 (best) BASIC13.27□□□□□ -0.29
Dchs1E9PVD3 Vrk3-201ENSMUST00000002275 1969 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Dchs1E9PVD3 Pomgnt2-206ENSMUST00000216669 2504 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Dchs1E9PVD3 Denr-201ENSMUST00000023869 2339 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Dchs1E9PVD3 Cmss1-201ENSMUST00000114371 930 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Dchs1E9PVD3 Pigyl-201ENSMUST00000123680 695 ntAPPRIS P1 TSL 2 BASIC13.27□□□□□ -0.29
Dchs1E9PVD3 Gm12446-202ENSMUST00000152069 713 ntTSL 2 BASIC13.27□□□□□ -0.29
Dchs1E9PVD3 Gm16026-204ENSMUST00000162652 683 ntBASIC13.27□□□□□ -0.29
Dchs1E9PVD3 Emp3-202ENSMUST00000164119 784 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Dchs1E9PVD3 Caly-201ENSMUST00000026541 1220 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Dchs1E9PVD3 Snx27-202ENSMUST00000107283 3531 ntAPPRIS P4 TSL 1 (best) BASIC13.27□□□□□ -0.29
Dchs1E9PVD3 Pcsk4-201ENSMUST00000020340 2539 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Dchs1E9PVD3 Chd1l-201ENSMUST00000029730 3008 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Dchs1E9PVD3 Syf2-201ENSMUST00000030622 1369 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Dchs1E9PVD3 Crat-202ENSMUST00000102854 2160 ntTSL 5 BASIC13.27□□□□□ -0.29
Dchs1E9PVD3 Trim63-201ENSMUST00000030638 1855 ntAPPRIS ALT2 TSL 5 BASIC13.27□□□□□ -0.29
Dchs1E9PVD3 Fgf13-203ENSMUST00000119833 2237 ntTSL 5 BASIC13.26□□□□□ -0.29
Dchs1E9PVD3 Mettl22-201ENSMUST00000046470 1825 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Dchs1E9PVD3 Actl7b-201ENSMUST00000095080 1439 ntAPPRIS P1 BASIC13.26□□□□□ -0.29
Dchs1E9PVD3 Tcf3-210ENSMUST00000105346 2839 ntAPPRIS ALT2 TSL 1 (best) BASIC13.26□□□□□ -0.29
Dchs1E9PVD3 Defb30-203ENSMUST00000111208 503 ntAPPRIS ALT2 TSL 1 (best) BASIC13.26□□□□□ -0.29
Dchs1E9PVD3 Defb30-204ENSMUST00000111209 721 ntAPPRIS ALT2 TSL 1 (best) BASIC13.26□□□□□ -0.29
Dchs1E9PVD3 Rps13-ps4-201ENSMUST00000117927 456 ntBASIC13.26□□□□□ -0.29
Dchs1E9PVD3 Rps13-ps5-201ENSMUST00000117939 456 ntBASIC13.26□□□□□ -0.29
Dchs1E9PVD3 Gm15483-201ENSMUST00000120338 456 ntBASIC13.26□□□□□ -0.29
Dchs1E9PVD3 1600025M17Rik-202ENSMUST00000151426 547 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
Dchs1E9PVD3 Commd6-203ENSMUST00000168587 519 ntAPPRIS ALT2 TSL 1 (best) BASIC13.26□□□□□ -0.29
Dchs1E9PVD3 Gm44344-201ENSMUST00000200287 129 ntBASIC13.26□□□□□ -0.29
Dchs1E9PVD3 Fau-201ENSMUST00000043074 574 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Dchs1E9PVD3 Gm26889-201ENSMUST00000181523 2252 ntTSL 5 BASIC13.26□□□□□ -0.29
Dchs1E9PVD3 Gm7669-201ENSMUST00000210184 1603 ntBASIC13.26□□□□□ -0.29
Dchs1E9PVD3 Cyp2d10-201ENSMUST00000072776 1647 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Dchs1E9PVD3 Fgfr1op-202ENSMUST00000097419 3505 ntAPPRIS ALT2 TSL 1 (best) BASIC13.26□□□□□ -0.29
Dchs1E9PVD3 4930556H04Rik-201ENSMUST00000222451 1675 ntBASIC13.26□□□□□ -0.29
Dchs1E9PVD3 Neurl4-211ENSMUST00000177138 4886 ntAPPRIS ALT2 TSL 1 (best) BASIC13.26□□□□□ -0.29
Dchs1E9PVD3 Pabpn1l-202ENSMUST00000212966 1113 ntAPPRIS ALT2 TSL 1 (best) BASIC13.26□□□□□ -0.29
Dchs1E9PVD3 Olfr324-201ENSMUST00000054683 1122 ntAPPRIS P2 BASIC13.26□□□□□ -0.29
Dchs1E9PVD3 Ldb3-207ENSMUST00000227819 1499 ntBASIC13.26□□□□□ -0.29
Dchs1E9PVD3 Tmem88-201ENSMUST00000050140 1582 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Dchs1E9PVD3 Sumo3-201ENSMUST00000020501 2630 ntAPPRIS P3 TSL 1 (best) BASIC13.26□□□□□ -0.29
Dchs1E9PVD3 AC174678.1-201ENSMUST00000228007 2749 ntBASIC13.26□□□□□ -0.29
Dchs1E9PVD3 Ccdc115-201ENSMUST00000042493 1705 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Dchs1E9PVD3 Abl2-201ENSMUST00000027888 3549 ntAPPRIS P3 TSL 1 (best) BASIC13.26□□□□□ -0.29
Dchs1E9PVD3 Gm36979-201ENSMUST00000193616 539 ntTSL 5 BASIC13.26□□□□□ -0.29
Dchs1E9PVD3 Spata33-205ENSMUST00000212523 486 ntTSL 3 BASIC13.26□□□□□ -0.29
Dchs1E9PVD3 Polr2h-201ENSMUST00000021405 950 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Dchs1E9PVD3 Hist1h3g-201ENSMUST00000080859 530 ntAPPRIS P1 BASIC13.26□□□□□ -0.29
Dchs1E9PVD3 Hpse-201ENSMUST00000045617 3117 ntAPPRIS P2 TSL 1 (best) BASIC13.26□□□□□ -0.29
Dchs1E9PVD3 A4galt-202ENSMUST00000164614 2128 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Dchs1E9PVD3 Dusp4-201ENSMUST00000033930 2740 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Dchs1E9PVD3 Gm16011-201ENSMUST00000121567 2662 ntBASIC13.25□□□□□ -0.29
Dchs1E9PVD3 Nelfa-201ENSMUST00000030993 2580 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Dchs1E9PVD3 Slc25a29-201ENSMUST00000021693 1976 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Dchs1E9PVD3 Egfl7-202ENSMUST00000102907 1372 ntAPPRIS P4 TSL 1 (best) BASIC13.25□□□□□ -0.29
Dchs1E9PVD3 Gm6539-201ENSMUST00000119157 1064 ntBASIC13.25□□□□□ -0.29
Dchs1E9PVD3 Gm7286-201ENSMUST00000182691 1007 ntBASIC13.25□□□□□ -0.29
Dchs1E9PVD3 Timm9-206ENSMUST00000221367 836 ntAPPRIS P1 TSL 5 BASIC13.25□□□□□ -0.29
Dchs1E9PVD3 Slc41a3-202ENSMUST00000044019 2412 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
Dchs1E9PVD3 4930513N10Rik-203ENSMUST00000145562 2803 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
Dchs1E9PVD3 Zic3-202ENSMUST00000088629 1951 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
Dchs1E9PVD3 Rnf170-209ENSMUST00000209300 1881 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
Dchs1E9PVD3 Wdyhv1-201ENSMUST00000067563 1383 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Dchs1E9PVD3 Nme1-202ENSMUST00000107844 452 ntTSL 3 BASIC13.25□□□□□ -0.29
Dchs1E9PVD3 Pdlim7-202ENSMUST00000069929 899 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
Dchs1E9PVD3 Hgfac-201ENSMUST00000030985 2135 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Dchs1E9PVD3 Gm37166-201ENSMUST00000195473 2474 ntBASIC13.25□□□□□ -0.29
Dchs1E9PVD3 Fam109b-201ENSMUST00000050349 2745 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Dchs1E9PVD3 Hira-202ENSMUST00000120532 2063 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
Dchs1E9PVD3 Ntng1-203ENSMUST00000106570 1386 ntTSL 5 BASIC13.25□□□□□ -0.29
Dchs1E9PVD3 Snai1-201ENSMUST00000052631 1621 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Dchs1E9PVD3 Gm15824-201ENSMUST00000119516 955 ntBASIC13.24□□□□□ -0.29
Retrieved 100 of 76,532 protein–RNA pairs in 29.1 ms