Protein–RNA interactions for Protein: B2RQC2

Usp42, Ubiquitin carboxyl-terminal hydrolase 42, mousemouse

Known RBP Predictions only

Length 1,324 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp42B2RQC2 Tmem237-201ENSMUST00000087475 1823 ntAPPRIS ALT2 TSL 1 (best) BASIC17.73■□□□□ 0.43
Usp42B2RQC2 Skor1-201ENSMUST00000055281 3657 ntAPPRIS P3 TSL 1 (best) BASIC17.73■□□□□ 0.43
Usp42B2RQC2 Cbfa2t3-202ENSMUST00000064674 2867 ntAPPRIS ALT2 TSL 1 (best) BASIC17.73■□□□□ 0.43
Usp42B2RQC2 Fbxw2-205ENSMUST00000113078 1872 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Usp42B2RQC2 Muc3a-201ENSMUST00000179412 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC17.73■□□□□ 0.43
Usp42B2RQC2 Impdh1-205ENSMUST00000160878 2314 ntTSL 5 BASIC17.73■□□□□ 0.43
Usp42B2RQC2 E530001F21Rik-201ENSMUST00000120991 730 ntBASIC17.72■□□□□ 0.43
Usp42B2RQC2 2200002J24Rik-201ENSMUST00000013227 333 ntAPPRIS P1 TSL 3 BASIC17.72■□□□□ 0.43
Usp42B2RQC2 Gm20878-206ENSMUST00000153997 903 ntAPPRIS P2 TSL 2 BASIC17.72■□□□□ 0.43
Usp42B2RQC2 Cox6c-205ENSMUST00000156915 606 ntAPPRIS P1 TSL 5 BASIC17.72■□□□□ 0.43
Usp42B2RQC2 Gm5177-201ENSMUST00000183092 997 ntBASIC17.72■□□□□ 0.43
Usp42B2RQC2 Gm17968-201ENSMUST00000194902 784 ntBASIC17.72■□□□□ 0.43
Usp42B2RQC2 Gm6443-201ENSMUST00000203599 874 ntBASIC17.72■□□□□ 0.43
Usp42B2RQC2 AC159295.1-201ENSMUST00000225326 940 ntBASIC17.72■□□□□ 0.43
Usp42B2RQC2 Klk15-201ENSMUST00000068625 845 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Usp42B2RQC2 Zfyve27-201ENSMUST00000099443 2573 ntAPPRIS ALT2 TSL 1 (best) BASIC17.72■□□□□ 0.43
Usp42B2RQC2 Erf-201ENSMUST00000045847 3505 ntAPPRIS P2 TSL 1 (best) BASIC17.72■□□□□ 0.43
Usp42B2RQC2 1500011B03Rik-202ENSMUST00000112160 1333 ntAPPRIS ALT2 TSL 1 (best) BASIC17.72■□□□□ 0.43
Usp42B2RQC2 Cyfip2-205ENSMUST00000165599 6659 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Usp42B2RQC2 Nsg2-201ENSMUST00000020537 2239 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Usp42B2RQC2 Kazn-201ENSMUST00000036476 3843 ntAPPRIS P2 TSL 1 (best) BASIC17.72■□□□□ 0.43
Usp42B2RQC2 Asic4-201ENSMUST00000037708 2464 ntAPPRIS P2 TSL 1 (best) BASIC17.72■□□□□ 0.43
Usp42B2RQC2 AC174678.1-201ENSMUST00000228007 2749 ntBASIC17.72■□□□□ 0.43
Usp42B2RQC2 Sox13-205ENSMUST00000153799 3693 ntAPPRIS P2 TSL 1 (best) BASIC17.72■□□□□ 0.43
Usp42B2RQC2 Snx27-201ENSMUST00000029783 6261 ntAPPRIS ALT1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Usp42B2RQC2 Rnf114-202ENSMUST00000109214 3001 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Usp42B2RQC2 Rprd1a-201ENSMUST00000046206 4297 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Usp42B2RQC2 Loxl4-203ENSMUST00000164786 2617 ntAPPRIS ALT2 TSL 1 (best) BASIC17.72■□□□□ 0.43
Usp42B2RQC2 Fgf13-203ENSMUST00000119833 2237 ntTSL 5 BASIC17.72■□□□□ 0.43
Usp42B2RQC2 Comt-202ENSMUST00000115609 1786 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Usp42B2RQC2 Vps25-203ENSMUST00000100414 1220 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
Usp42B2RQC2 Dnajc24-201ENSMUST00000102555 1197 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Usp42B2RQC2 Trem2-202ENSMUST00000113237 1056 ntAPPRIS ALT2 TSL 1 (best) BASIC17.72■□□□□ 0.43
Usp42B2RQC2 Gm11779-201ENSMUST00000118541 368 ntBASIC17.72■□□□□ 0.43
Usp42B2RQC2 Slc39a1-ps-201ENSMUST00000120862 969 ntBASIC17.72■□□□□ 0.43
Usp42B2RQC2 Frmd5-213ENSMUST00000212518 922 ntTSL 5 BASIC17.72■□□□□ 0.43
Usp42B2RQC2 CT010506.4-201ENSMUST00000225457 351 ntBASIC17.72■□□□□ 0.43
Usp42B2RQC2 Gm10313-201ENSMUST00000095320 1002 ntBASIC17.72■□□□□ 0.43
Usp42B2RQC2 Mxra8os-201ENSMUST00000097740 687 ntBASIC17.72■□□□□ 0.43
Usp42B2RQC2 Pard6a-202ENSMUST00000098444 1273 ntTSL 2 BASIC17.72■□□□□ 0.43
Usp42B2RQC2 Hhat-201ENSMUST00000044190 2839 ntAPPRIS P2 TSL 1 (best) BASIC17.71■□□□□ 0.43
Usp42B2RQC2 Rabep1-201ENSMUST00000076270 5408 ntAPPRIS P2 TSL 1 (best) BASIC17.71■□□□□ 0.43
Usp42B2RQC2 Large2-214ENSMUST00000176774 2377 ntAPPRIS ALT2 TSL 5 BASIC17.71■□□□□ 0.43
Usp42B2RQC2 Pald1-201ENSMUST00000020289 4282 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Usp42B2RQC2 Hnrnpr-202ENSMUST00000105850 2683 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Usp42B2RQC2 Idh3b-201ENSMUST00000028892 1616 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Usp42B2RQC2 Tmem82-201ENSMUST00000053263 1671 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Usp42B2RQC2 Siglecf-201ENSMUST00000012798 2510 ntAPPRIS P3 TSL 1 (best) BASIC17.71■□□□□ 0.43
Usp42B2RQC2 Cep57-201ENSMUST00000034398 2523 ntAPPRIS P3 TSL 1 (best) BASIC17.71■□□□□ 0.43
Usp42B2RQC2 Tmc8-203ENSMUST00000117781 2344 ntAPPRIS ALT2 TSL 1 (best) BASIC17.71■□□□□ 0.43
Usp42B2RQC2 4930459C07Rik-202ENSMUST00000219638 1805 ntTSL 5 BASIC17.71■□□□□ 0.43
Usp42B2RQC2 Chrna4-201ENSMUST00000067120 4565 ntAPPRIS P2 TSL 1 (best) BASIC17.71■□□□□ 0.43
Usp42B2RQC2 Gm13344-201ENSMUST00000137714 1557 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
Usp42B2RQC2 Chst2-201ENSMUST00000036267 7328 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.42
Usp42B2RQC2 Dlk1-203ENSMUST00000109842 1129 ntTSL 1 (best) BASIC17.71■□□□□ 0.42
Usp42B2RQC2 Tpt1-205ENSMUST00000142061 996 ntTSL 5 BASIC17.71■□□□□ 0.42
Usp42B2RQC2 Sardhos-201ENSMUST00000170435 265 ntTSL 3 BASIC17.71■□□□□ 0.42
Usp42B2RQC2 Miox-201ENSMUST00000023282 1130 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.42
Usp42B2RQC2 2310011J03Rik-201ENSMUST00000020341 1649 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Usp42B2RQC2 Krt25-201ENSMUST00000038004 1989 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Usp42B2RQC2 Mis18a-201ENSMUST00000099554 1333 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Usp42B2RQC2 Iqck-202ENSMUST00000106547 2026 ntAPPRIS P2 TSL 5 BASIC17.7■□□□□ 0.42
Usp42B2RQC2 Islr2-205ENSMUST00000170421 4071 ntAPPRIS P3 TSL 3 BASIC17.7■□□□□ 0.42
Usp42B2RQC2 Nkx3-1-201ENSMUST00000022646 3195 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Usp42B2RQC2 Patz1-202ENSMUST00000093402 3173 ntTSL 2 BASIC17.7■□□□□ 0.42
Usp42B2RQC2 Fzd10-201ENSMUST00000117102 3250 ntAPPRIS P1 BASIC17.7■□□□□ 0.42
Usp42B2RQC2 Gm28372-201ENSMUST00000188900 1876 ntAPPRIS P1 TSL 5 BASIC17.7■□□□□ 0.42
Usp42B2RQC2 Trim65-201ENSMUST00000067632 3048 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Usp42B2RQC2 Ppp3cb-201ENSMUST00000022355 3074 ntAPPRIS ALT1 TSL 5 BASIC17.7■□□□□ 0.42
Usp42B2RQC2 Trpc3-201ENSMUST00000029271 3694 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Usp42B2RQC2 Bicd2-203ENSMUST00000110085 4588 ntAPPRIS ALT2 TSL 1 (best) BASIC17.7■□□□□ 0.42
Usp42B2RQC2 Ube2d3-210ENSMUST00000197539 2515 ntAPPRIS P2 TSL 1 (best) BASIC17.7■□□□□ 0.42
Usp42B2RQC2 1810026B05Rik-205ENSMUST00000184855 409 ntTSL 3 BASIC17.7■□□□□ 0.42
Usp42B2RQC2 Gm44596-201ENSMUST00000204223 647 ntAPPRIS P1 TSL 5 BASIC17.7■□□□□ 0.42
Usp42B2RQC2 BC031181-201ENSMUST00000040284 1047 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Usp42B2RQC2 Dek-201ENSMUST00000021807 2556 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Usp42B2RQC2 Cnot11-203ENSMUST00000161515 3482 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Usp42B2RQC2 Efr3a-201ENSMUST00000015146 5215 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Usp42B2RQC2 Fubp3-201ENSMUST00000055244 3648 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
Usp42B2RQC2 Gm21981-201ENSMUST00000143789 2721 ntAPPRIS P1 TSL 5 BASIC17.69■□□□□ 0.42
Usp42B2RQC2 Trnt1-201ENSMUST00000057578 2283 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Usp42B2RQC2 Inip-202ENSMUST00000107526 1438 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
Usp42B2RQC2 AI661453-201ENSMUST00000037701 1410 ntAPPRIS ALT2 TSL 1 (best) BASIC17.69■□□□□ 0.42
Usp42B2RQC2 Sema3b-202ENSMUST00000102529 2875 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Usp42B2RQC2 Ankrd27-202ENSMUST00000186245 1926 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
Usp42B2RQC2 Nanos1-201ENSMUST00000088237 3927 ntAPPRIS P1 BASIC17.69■□□□□ 0.42
Usp42B2RQC2 Arl11-201ENSMUST00000055159 1482 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Usp42B2RQC2 Mapk8ip3-208ENSMUST00000121787 5431 ntAPPRIS ALT2 TSL 1 (best) BASIC17.69■□□□□ 0.42
Usp42B2RQC2 Sphk1-211ENSMUST00000141798 1532 ntAPPRIS P4 TSL 1 (best) BASIC17.69■□□□□ 0.42
Usp42B2RQC2 Pitpna-203ENSMUST00000143219 3761 ntAPPRIS P2 TSL 1 (best) BASIC17.69■□□□□ 0.42
Usp42B2RQC2 Fkbp4-201ENSMUST00000032508 2217 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Usp42B2RQC2 Tmem255a-203ENSMUST00000089056 1745 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
Usp42B2RQC2 Fyn-202ENSMUST00000099967 3528 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Usp42B2RQC2 Ttll3-202ENSMUST00000038889 3114 ntAPPRIS ALT2 TSL 5 BASIC17.69■□□□□ 0.42
Usp42B2RQC2 Tmem254c-202ENSMUST00000100819 1211 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Usp42B2RQC2 Cd164l2-201ENSMUST00000105910 986 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Usp42B2RQC2 Gm15758-201ENSMUST00000161681 695 ntTSL 5 BASIC17.69■□□□□ 0.42
Usp42B2RQC2 Cmtm3-204ENSMUST00000212081 850 ntAPPRIS P1 TSL 5 BASIC17.69■□□□□ 0.42
Usp42B2RQC2 Tspan18-201ENSMUST00000028646 1203 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Usp42B2RQC2 Tbcc-201ENSMUST00000040434 1164 ntAPPRIS P1 BASIC17.69■□□□□ 0.42
Retrieved 100 of 76,532 protein–RNA pairs in 28.3 ms