Protein–RNA interactions for Protein: A6H584

Col6a5, Collagen alpha-5(VI) chain, mousemouse

Predictions only

Length 2,640 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col6a5A6H584 AA619741-201ENSMUST00000195095 646 ntBASIC11.36□□□□□ -0.59
Col6a5A6H584 Gm4756-204ENSMUST00000209038 990 ntTSL 5 BASIC11.36□□□□□ -0.59
Col6a5A6H584 Tm2d2-202ENSMUST00000210536 727 ntTSL 3 BASIC11.36□□□□□ -0.59
Col6a5A6H584 AC154276.1-201ENSMUST00000228874 1299 ntBASIC11.36□□□□□ -0.59
Col6a5A6H584 Lingo3-201ENSMUST00000053986 3439 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Col6a5A6H584 Rgma-204ENSMUST00000139780 3371 ntAPPRIS ALT2 TSL 1 (best) BASIC11.36□□□□□ -0.59
Col6a5A6H584 Trabd-201ENSMUST00000081702 2439 ntAPPRIS P2 TSL 1 (best) BASIC11.36□□□□□ -0.59
Col6a5A6H584 Cadm1-204ENSMUST00000114548 4482 ntTSL 1 (best) BASIC11.36□□□□□ -0.59
Col6a5A6H584 Pald1-201ENSMUST00000020289 4282 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Col6a5A6H584 Gm16867-201ENSMUST00000179116 3084 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Col6a5A6H584 Txndc11-201ENSMUST00000038424 3095 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Col6a5A6H584 Nrxn2-202ENSMUST00000113458 3503 ntTSL 5 BASIC11.36□□□□□ -0.59
Col6a5A6H584 Crtac1-201ENSMUST00000048630 2616 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Col6a5A6H584 Cdkn1a-201ENSMUST00000023829 1910 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Col6a5A6H584 Tmod4-202ENSMUST00000107227 1260 ntAPPRIS P1 TSL 5 BASIC11.36□□□□□ -0.59
Col6a5A6H584 Lamtor2-202ENSMUST00000119002 568 ntTSL 2 BASIC11.36□□□□□ -0.59
Col6a5A6H584 Gm6460-202ENSMUST00000163787 821 ntAPPRIS P2 TSL 1 (best) BASIC11.36□□□□□ -0.59
Col6a5A6H584 Gm8879-201ENSMUST00000170260 1125 ntAPPRIS P1 TSL 5 BASIC11.36□□□□□ -0.59
Col6a5A6H584 4933402N22Rik-202ENSMUST00000170301 1092 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Col6a5A6H584 Gm42906-201ENSMUST00000202365 408 ntAPPRIS P1 TSL 5 BASIC11.36□□□□□ -0.59
Col6a5A6H584 Smim11-201ENSMUST00000063641 517 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Col6a5A6H584 Rpl10-201ENSMUST00000008826 799 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Col6a5A6H584 Fbxo25-201ENSMUST00000043520 2012 ntAPPRIS P3 TSL 1 (best) BASIC11.36□□□□□ -0.59
Col6a5A6H584 Fam69c-201ENSMUST00000052501 2153 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Col6a5A6H584 Fam109a-203ENSMUST00000198271 2335 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Col6a5A6H584 Gnao1-201ENSMUST00000034198 2948 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Col6a5A6H584 Tex264-201ENSMUST00000046735 1391 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Col6a5A6H584 Ndufs2-202ENSMUST00000111318 1545 ntTSL 5 BASIC11.35□□□□□ -0.59
Col6a5A6H584 Scube1-202ENSMUST00000043634 5161 ntAPPRIS ALT2 TSL 1 (best) BASIC11.35□□□□□ -0.59
Col6a5A6H584 AL645783.1-201ENSMUST00000221416 1832 ntBASIC11.35□□□□□ -0.59
Col6a5A6H584 Fmnl2-201ENSMUST00000049483 5461 ntTSL 5 BASIC11.35□□□□□ -0.59
Col6a5A6H584 Elovl1-201ENSMUST00000006557 1811 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Col6a5A6H584 Dixdc1-207ENSMUST00000121634 2420 ntTSL 5 BASIC11.35□□□□□ -0.59
Col6a5A6H584 Ehmt2-204ENSMUST00000114033 3882 ntAPPRIS ALT2 TSL 1 (best) BASIC11.35□□□□□ -0.59
Col6a5A6H584 Camp-201ENSMUST00000112022 758 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Col6a5A6H584 Gm12050-201ENSMUST00000127483 615 ntTSL 1 (best) BASIC11.35□□□□□ -0.59
Col6a5A6H584 Gm14224-201ENSMUST00000147187 864 ntTSL 3 BASIC11.35□□□□□ -0.59
Col6a5A6H584 Neurl3-202ENSMUST00000188666 1206 ntTSL 5 BASIC11.35□□□□□ -0.59
Col6a5A6H584 Gm28198-201ENSMUST00000190938 471 ntTSL 3 BASIC11.35□□□□□ -0.59
Col6a5A6H584 Net1-207ENSMUST00000223258 597 ntTSL 1 (best) BASIC11.35□□□□□ -0.59
Col6a5A6H584 Ufsp1-201ENSMUST00000052825 1037 ntAPPRIS P1 BASIC11.35□□□□□ -0.59
Col6a5A6H584 Upk3bl-201ENSMUST00000006303 1045 ntAPPRIS P2 TSL 1 (best) BASIC11.35□□□□□ -0.59
Col6a5A6H584 A730061H03Rik-201ENSMUST00000066106 465 ntAPPRIS P1 BASIC11.35□□□□□ -0.59
Col6a5A6H584 Mapk14-201ENSMUST00000004990 3547 ntAPPRIS ALT1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Col6a5A6H584 Mapk14-202ENSMUST00000062694 3547 ntAPPRIS P3 TSL 1 (best) BASIC11.35□□□□□ -0.59
Col6a5A6H584 Nosip-201ENSMUST00000003513 1814 ntAPPRIS P3 TSL 1 (best) BASIC11.35□□□□□ -0.59
Col6a5A6H584 Foxi1-201ENSMUST00000060271 2357 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Col6a5A6H584 Cap1-203ENSMUST00000106257 2768 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Col6a5A6H584 Prpf40b-212ENSMUST00000145482 3308 ntAPPRIS P2 TSL 1 (best) BASIC11.35□□□□□ -0.59
Col6a5A6H584 Wnt2b-201ENSMUST00000029429 3318 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Col6a5A6H584 Bicdl1-201ENSMUST00000055408 3026 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Col6a5A6H584 Mvk-202ENSMUST00000112239 1602 ntAPPRIS ALT2 TSL 1 (best) BASIC11.35□□□□□ -0.59
Col6a5A6H584 Idh3b-201ENSMUST00000028892 1616 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Col6a5A6H584 Gm38100-201ENSMUST00000194391 1329 ntAPPRIS ALT2 BASIC11.35□□□□□ -0.59
Col6a5A6H584 Kansl1-204ENSMUST00000106972 5427 ntAPPRIS ALT2 TSL 5 BASIC11.35□□□□□ -0.59
Col6a5A6H584 Gm8463-201ENSMUST00000208573 613 ntBASIC11.35□□□□□ -0.59
Col6a5A6H584 Gm32926-202ENSMUST00000215162 1176 ntTSL 1 (best) BASIC11.35□□□□□ -0.59
Col6a5A6H584 AC132317.1-201ENSMUST00000227227 962 ntBASIC11.35□□□□□ -0.59
Col6a5A6H584 Prss41-201ENSMUST00000024926 1128 ntAPPRIS P2 TSL 1 (best) BASIC11.35□□□□□ -0.59
Col6a5A6H584 Gm40773-201ENSMUST00000218113 1502 ntTSL 5 BASIC11.35□□□□□ -0.59
Col6a5A6H584 Hmbs-202ENSMUST00000097558 1534 ntTSL 1 (best) BASIC11.35□□□□□ -0.59
Col6a5A6H584 Lrp8os3-201ENSMUST00000125464 1770 ntTSL 1 (best) BASIC11.35□□□□□ -0.59
Col6a5A6H584 Satb1-211ENSMUST00000152830 5993 ntAPPRIS P2 TSL 2 BASIC11.35□□□□□ -0.59
Col6a5A6H584 Fbrsl1-201ENSMUST00000056124 2700 ntTSL 2 BASIC11.34□□□□□ -0.59
Col6a5A6H584 Col13a1-204ENSMUST00000105453 2935 ntTSL 2 BASIC11.34□□□□□ -0.59
Col6a5A6H584 Cspg5-201ENSMUST00000035058 3870 ntAPPRIS P2 TSL 1 (best) BASIC11.34□□□□□ -0.59
Col6a5A6H584 Lncpint-201ENSMUST00000115107 1676 ntTSL 5 BASIC11.34□□□□□ -0.59
Col6a5A6H584 Dctn4-202ENSMUST00000223590 1530 ntBASIC11.34□□□□□ -0.59
Col6a5A6H584 Gm22018-201ENSMUST00000104357 131 ntBASIC11.34□□□□□ -0.59
Col6a5A6H584 Styxl1-202ENSMUST00000111161 963 ntTSL 1 (best) BASIC11.34□□□□□ -0.59
Col6a5A6H584 Prcd-202ENSMUST00000116318 799 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Col6a5A6H584 Gm7558-201ENSMUST00000193221 1165 ntBASIC11.34□□□□□ -0.59
Col6a5A6H584 Gm34084-201ENSMUST00000222236 1298 ntTSL 5 BASIC11.34□□□□□ -0.59
Col6a5A6H584 AC140451.2-201ENSMUST00000228030 664 ntBASIC11.34□□□□□ -0.59
Col6a5A6H584 Tmem40-201ENSMUST00000072933 1272 ntAPPRIS P3 TSL 1 (best) BASIC11.34□□□□□ -0.59
Col6a5A6H584 Rbfox2-204ENSMUST00000171751 3558 ntTSL 1 (best) BASIC11.34□□□□□ -0.59
Col6a5A6H584 Rnf167-201ENSMUST00000037534 1833 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Col6a5A6H584 Sf3b4-201ENSMUST00000076372 1915 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Col6a5A6H584 Sctr-201ENSMUST00000072886 2012 ntAPPRIS P3 TSL 2 BASIC11.34□□□□□ -0.59
Col6a5A6H584 Chsy3-201ENSMUST00000080721 2931 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Col6a5A6H584 Nrg2-203ENSMUST00000115713 3001 ntAPPRIS P1 TSL 5 BASIC11.34□□□□□ -0.59
Col6a5A6H584 Disc1-201ENSMUST00000074562 2597 ntAPPRIS ALT2 TSL 5 BASIC11.34□□□□□ -0.59
Col6a5A6H584 Disc1-203ENSMUST00000098311 2597 ntAPPRIS ALT2 TSL 1 (best) BASIC11.34□□□□□ -0.59
Col6a5A6H584 Fnbp1-204ENSMUST00000100208 1859 ntTSL 5 BASIC11.34□□□□□ -0.59
Col6a5A6H584 Slc22a3-201ENSMUST00000024595 3501 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Col6a5A6H584 Nt5c3b-205ENSMUST00000107399 1427 ntTSL 1 (best) BASIC11.34□□□□□ -0.59
Col6a5A6H584 Dctd-201ENSMUST00000033966 2072 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Col6a5A6H584 Rnaseh2a-210ENSMUST00000147812 1532 ntAPPRIS P1 TSL 5 BASIC11.34□□□□□ -0.59
Col6a5A6H584 Zfp219-204ENSMUST00000226522 2804 ntAPPRIS P2 BASIC11.34□□□□□ -0.59
Col6a5A6H584 Cep57-208ENSMUST00000147115 2262 ntAPPRIS ALT2 TSL 1 (best) BASIC11.34□□□□□ -0.59
Col6a5A6H584 Abcb10-201ENSMUST00000075578 4306 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Col6a5A6H584 Acin1-224ENSMUST00000167015 1746 ntAPPRIS ALT2 TSL 1 (best) BASIC11.34□□□□□ -0.59
Col6a5A6H584 Dnase1l2-201ENSMUST00000088506 1921 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Col6a5A6H584 Ipp-202ENSMUST00000106479 2118 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Col6a5A6H584 Simc1-201ENSMUST00000118072 2116 ntAPPRIS ALT2 TSL 5 BASIC11.34□□□□□ -0.59
Col6a5A6H584 Gm14966-202ENSMUST00000129675 649 ntTSL 2 BASIC11.34□□□□□ -0.59
Col6a5A6H584 Gm10766-202ENSMUST00000194123 606 ntBASIC11.34□□□□□ -0.59
Col6a5A6H584 Mzb1-201ENSMUST00000025211 905 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Col6a5A6H584 Atp6v1g1-201ENSMUST00000035301 1135 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Col6a5A6H584 Gemin7-201ENSMUST00000051364 763 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Retrieved 100 of 76,532 protein–RNA pairs in 30.3 ms