Protein–RNA interactions for Protein: A0N8R1

Trav12-1, T cell receptor alpha variable 12-1 (Fragment), mousemouse

Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav12-1A0N8R1 Gm15372-201ENSMUST00000120729 834 ntBASIC12.69□□□□□ -0.38
Trav12-1A0N8R1 Tsc22d1-208ENSMUST00000142683 797 ntTSL 3 BASIC12.69□□□□□ -0.38
Trav12-1A0N8R1 Calu-207ENSMUST00000173216 673 ntTSL 5 BASIC12.69□□□□□ -0.38
Trav12-1A0N8R1 Gm43661-201ENSMUST00000199099 687 ntTSL 3 BASIC12.69□□□□□ -0.38
Trav12-1A0N8R1 Gm8655-201ENSMUST00000221159 852 ntBASIC12.69□□□□□ -0.38
Trav12-1A0N8R1 Ank1-201ENSMUST00000033947 1030 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
Trav12-1A0N8R1 Miga1-204ENSMUST00000199334 4024 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
Trav12-1A0N8R1 Slc16a6-202ENSMUST00000070152 4219 ntAPPRIS P3 TSL 1 (best) BASIC12.69□□□□□ -0.38
Trav12-1A0N8R1 Cct6b-202ENSMUST00000100722 1871 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
Trav12-1A0N8R1 Nop56-202ENSMUST00000103198 1877 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Trav12-1A0N8R1 Sept8-202ENSMUST00000117061 4563 ntAPPRIS P3 TSL 1 (best) BASIC12.69□□□□□ -0.38
Trav12-1A0N8R1 Farp2-201ENSMUST00000120301 3937 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Trav12-1A0N8R1 Ankhd1-214ENSMUST00000155329 8223 ntAPPRIS P1 TSL 5 BASIC12.69□□□□□ -0.38
Trav12-1A0N8R1 Map4k5-202ENSMUST00000110567 4250 ntTSL 5 BASIC12.69□□□□□ -0.38
Trav12-1A0N8R1 Mtfp1-201ENSMUST00000004868 1411 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Trav12-1A0N8R1 Large2-214ENSMUST00000176774 2377 ntAPPRIS ALT2 TSL 5 BASIC12.69□□□□□ -0.38
Trav12-1A0N8R1 Tchp-201ENSMUST00000094441 2882 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Trav12-1A0N8R1 Cyp2w1-201ENSMUST00000031521 1512 ntAPPRIS P1 TSL 5 BASIC12.68□□□□□ -0.38
Trav12-1A0N8R1 Tomm70a-201ENSMUST00000166897 3778 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Trav12-1A0N8R1 Mapk1ip1-203ENSMUST00000119664 1883 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Trav12-1A0N8R1 Dyrk3-201ENSMUST00000016670 3164 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Trav12-1A0N8R1 Cgn-202ENSMUST00000107273 5016 ntAPPRIS P3 TSL 1 (best) BASIC12.68□□□□□ -0.38
Trav12-1A0N8R1 Olfr317-202ENSMUST00000215513 2769 ntAPPRIS P1 TSL 5 BASIC12.68□□□□□ -0.38
Trav12-1A0N8R1 Vldlr-208ENSMUST00000172302 3855 ntAPPRIS ALT1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Trav12-1A0N8R1 Slc24a3-202ENSMUST00000110007 4048 ntAPPRIS ALT2 TSL 1 (best) BASIC12.68□□□□□ -0.38
Trav12-1A0N8R1 Gm45293-201ENSMUST00000209754 1812 ntBASIC12.68□□□□□ -0.38
Trav12-1A0N8R1 Necab3-201ENSMUST00000000895 1829 ntAPPRIS P2 TSL 1 (best) BASIC12.68□□□□□ -0.38
Trav12-1A0N8R1 Mrps12-204ENSMUST00000171183 883 ntAPPRIS P1 TSL 2 BASIC12.68□□□□□ -0.38
Trav12-1A0N8R1 Gm26887-201ENSMUST00000181282 547 ntTSL 5 BASIC12.68□□□□□ -0.38
Trav12-1A0N8R1 Gm8318-201ENSMUST00000182954 872 ntBASIC12.68□□□□□ -0.38
Trav12-1A0N8R1 Gm27867-201ENSMUST00000184778 125 ntBASIC12.68□□□□□ -0.38
Trav12-1A0N8R1 Celrr-203ENSMUST00000185678 937 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
Trav12-1A0N8R1 Vsig2-201ENSMUST00000002008 1166 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Trav12-1A0N8R1 AC108846.1-201ENSMUST00000214531 513 ntBASIC12.68□□□□□ -0.38
Trav12-1A0N8R1 Ccdc182-201ENSMUST00000037268 1204 ntAPPRIS P1 BASIC12.68□□□□□ -0.38
Trav12-1A0N8R1 Prss40-201ENSMUST00000047840 1275 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Trav12-1A0N8R1 2310039H08Rik-201ENSMUST00000071430 773 ntAPPRIS P1 BASIC12.68□□□□□ -0.38
Trav12-1A0N8R1 Sult2b1-201ENSMUST00000075571 1193 ntAPPRIS P2 TSL 1 (best) BASIC12.68□□□□□ -0.38
Trav12-1A0N8R1 Acp7-201ENSMUST00000040112 1978 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Trav12-1A0N8R1 Chmp4c-201ENSMUST00000029049 6188 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Trav12-1A0N8R1 Gm10605-202ENSMUST00000183019 3198 ntBASIC12.68□□□□□ -0.38
Trav12-1A0N8R1 Vcan-205ENSMUST00000159337 2273 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
Trav12-1A0N8R1 Gipc2-201ENSMUST00000046614 1596 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Trav12-1A0N8R1 Hectd2-201ENSMUST00000047247 4731 ntAPPRIS P3 TSL 1 (best) BASIC12.68□□□□□ -0.38
Trav12-1A0N8R1 Zfp574-201ENSMUST00000053410 3145 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Trav12-1A0N8R1 Gm34419-201ENSMUST00000211383 1387 ntTSL 5 BASIC12.68□□□□□ -0.38
Trav12-1A0N8R1 Ch25h-201ENSMUST00000050562 1350 ntAPPRIS P1 BASIC12.68□□□□□ -0.38
Trav12-1A0N8R1 Daxx-201ENSMUST00000079421 2580 ntAPPRIS P2 TSL 1 (best) BASIC12.68□□□□□ -0.38
Trav12-1A0N8R1 Gm37912-201ENSMUST00000191895 3076 ntBASIC12.68□□□□□ -0.38
Trav12-1A0N8R1 Bst1-201ENSMUST00000101237 2856 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Trav12-1A0N8R1 Cspg5-201ENSMUST00000035058 3870 ntAPPRIS P2 TSL 1 (best) BASIC12.67□□□□□ -0.38
Trav12-1A0N8R1 A830012C17Rik-201ENSMUST00000131498 1665 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
Trav12-1A0N8R1 Maea-201ENSMUST00000114449 2193 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Trav12-1A0N8R1 Dlg5-202ENSMUST00000073687 7784 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
Trav12-1A0N8R1 Dusp15-203ENSMUST00000123121 2993 ntAPPRIS P1 TSL 3 BASIC12.67□□□□□ -0.38
Trav12-1A0N8R1 Galnt14-201ENSMUST00000024858 2990 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Trav12-1A0N8R1 Tm4sf4-201ENSMUST00000029377 1496 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Trav12-1A0N8R1 Map6d1-201ENSMUST00000040880 3273 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Trav12-1A0N8R1 Mpped1-201ENSMUST00000046168 3265 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Trav12-1A0N8R1 4930481A15Rik-201ENSMUST00000128542 2106 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
Trav12-1A0N8R1 Poc1b-204ENSMUST00000159990 3449 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
Trav12-1A0N8R1 Clgn-202ENSMUST00000109831 2293 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Trav12-1A0N8R1 Csad-201ENSMUST00000023805 2265 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Trav12-1A0N8R1 Ralgds-201ENSMUST00000028170 3590 ntAPPRIS P3 TSL 1 (best) BASIC12.67□□□□□ -0.38
Trav12-1A0N8R1 Atp13a3-201ENSMUST00000061350 7220 ntAPPRIS ALT2 TSL 5 BASIC12.67□□□□□ -0.38
Trav12-1A0N8R1 Olfr55-201ENSMUST00000112168 948 ntAPPRIS P1 BASIC12.67□□□□□ -0.38
Trav12-1A0N8R1 Gm26664-201ENSMUST00000181140 705 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
Trav12-1A0N8R1 Gm7506-201ENSMUST00000207758 815 ntBASIC12.67□□□□□ -0.38
Trav12-1A0N8R1 AC093926.2-201ENSMUST00000214468 1228 ntBASIC12.67□□□□□ -0.38
Trav12-1A0N8R1 1700022H01Rik-201ENSMUST00000219142 387 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
Trav12-1A0N8R1 CT009510.1-201ENSMUST00000227972 270 ntBASIC12.67□□□□□ -0.38
Trav12-1A0N8R1 Acyp2-201ENSMUST00000074613 863 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Trav12-1A0N8R1 Serf2-201ENSMUST00000099475 525 ntTSL 2 BASIC12.67□□□□□ -0.38
Trav12-1A0N8R1 Tbk1-201ENSMUST00000020316 3024 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Trav12-1A0N8R1 Fkbp4-201ENSMUST00000032508 2217 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Trav12-1A0N8R1 Hs3st3b1-201ENSMUST00000094103 4911 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Trav12-1A0N8R1 Cbln3-202ENSMUST00000172378 1438 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Trav12-1A0N8R1 Dpysl3-204ENSMUST00000121805 5484 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
Trav12-1A0N8R1 Wdr45b-201ENSMUST00000026173 2321 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Trav12-1A0N8R1 Kdm7a-201ENSMUST00000002305 9566 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Trav12-1A0N8R1 Kif21a-201ENSMUST00000067205 6307 ntAPPRIS ALT2 TSL 1 (best) BASIC12.67□□□□□ -0.38
Trav12-1A0N8R1 Crmp1-202ENSMUST00000114158 3051 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
Trav12-1A0N8R1 Knop1-205ENSMUST00000116280 5382 ntAPPRIS P3 TSL 5 BASIC12.67□□□□□ -0.38
Trav12-1A0N8R1 Galnt6os-201ENSMUST00000160960 1389 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
Trav12-1A0N8R1 Rnf44-211ENSMUST00000134862 3797 ntTSL 5 BASIC12.67□□□□□ -0.38
Trav12-1A0N8R1 Dzip1-201ENSMUST00000004055 4079 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Trav12-1A0N8R1 Gldn-201ENSMUST00000056740 4658 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Trav12-1A0N8R1 Msi1-208ENSMUST00000150779 3133 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Trav12-1A0N8R1 Slc39a11-203ENSMUST00000106633 2688 ntAPPRIS ALT2 TSL 1 (best) BASIC12.66□□□□□ -0.38
Trav12-1A0N8R1 Fgf13-203ENSMUST00000119833 2237 ntTSL 5 BASIC12.66□□□□□ -0.38
Trav12-1A0N8R1 Cpsf6-206ENSMUST00000176670 2227 ntTSL 5 BASIC12.66□□□□□ -0.38
Trav12-1A0N8R1 Spdef-202ENSMUST00000114870 2070 ntAPPRIS P1 TSL 5 BASIC12.66□□□□□ -0.38
Trav12-1A0N8R1 Dtx3-201ENSMUST00000038217 1944 ntAPPRIS P2 TSL 1 (best) BASIC12.66□□□□□ -0.38
Trav12-1A0N8R1 AC157650.3-201ENSMUST00000225058 1476 ntBASIC12.66□□□□□ -0.38
Trav12-1A0N8R1 Auh-201ENSMUST00000021913 1320 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Trav12-1A0N8R1 Plcxd1-201ENSMUST00000086687 1346 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Trav12-1A0N8R1 Pcdh20-201ENSMUST00000061628 5241 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Trav12-1A0N8R1 Syne3-201ENSMUST00000067005 5097 ntAPPRIS ALT2 TSL 1 (best) BASIC12.66□□□□□ -0.38
Trav12-1A0N8R1 Lamp2-203ENSMUST00000074913 2184 ntAPPRIS ALT2 TSL 1 (best) BASIC12.66□□□□□ -0.38
Trav12-1A0N8R1 Ccne2-207ENSMUST00000170901 3006 ntAPPRIS P4 TSL 1 (best) BASIC12.66□□□□□ -0.38
Retrieved 100 of 76,532 protein–RNA pairs in 24.7 ms