Protein–RNA interactions for Protein: A0A0G2JFX3

Trav13d-4, T cell receptor alpha variable 13D-4 (Fragment), mousemouse

Predictions only

Length 110 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav13d-4A0A0G2JFX3 Sema4b-204ENSMUST00000205822 3760 ntAPPRIS P1 TSL 1 (best) BASIC10.47□□□□□ -0.73
Trav13d-4A0A0G2JFX3 Pogk-204ENSMUST00000135673 2433 ntAPPRIS ALT2 TSL 1 (best) BASIC10.47□□□□□ -0.73
Trav13d-4A0A0G2JFX3 Edem3-204ENSMUST00000191070 3127 ntTSL 1 (best) BASIC10.47□□□□□ -0.73
Trav13d-4A0A0G2JFX3 Capn1-201ENSMUST00000025891 3100 ntAPPRIS P1 TSL 1 (best) BASIC10.47□□□□□ -0.73
Trav13d-4A0A0G2JFX3 Fzd7-201ENSMUST00000114246 4532 ntAPPRIS P1 BASIC10.47□□□□□ -0.73
Trav13d-4A0A0G2JFX3 Fhod3-201ENSMUST00000037097 5408 ntAPPRIS P1 TSL 1 (best) BASIC10.47□□□□□ -0.73
Trav13d-4A0A0G2JFX3 Plch2-210ENSMUST00000176194 5619 ntAPPRIS ALT2 TSL 5 BASIC10.47□□□□□ -0.73
Trav13d-4A0A0G2JFX3 Sf3b4-201ENSMUST00000076372 1915 ntAPPRIS P1 TSL 1 (best) BASIC10.47□□□□□ -0.73
Trav13d-4A0A0G2JFX3 Tpbg-202ENSMUST00000098500 3481 ntAPPRIS P1 TSL 1 (best) BASIC10.47□□□□□ -0.73
Trav13d-4A0A0G2JFX3 Wfikkn1-201ENSMUST00000095487 1981 ntAPPRIS P1 TSL 1 (best) BASIC10.47□□□□□ -0.73
Trav13d-4A0A0G2JFX3 Ecel1-203ENSMUST00000160810 2898 ntAPPRIS P1 TSL 1 (best) BASIC10.47□□□□□ -0.73
Trav13d-4A0A0G2JFX3 Esco1-203ENSMUST00000115864 2148 ntAPPRIS ALT2 TSL 1 (best) BASIC10.47□□□□□ -0.73
Trav13d-4A0A0G2JFX3 Zscan10-204ENSMUST00000118369 1006 ntTSL 1 (best) BASIC10.47□□□□□ -0.73
Trav13d-4A0A0G2JFX3 Mgarp-203ENSMUST00000141156 1246 ntAPPRIS ALT2 TSL 2 BASIC10.47□□□□□ -0.73
Trav13d-4A0A0G2JFX3 Gm6345-202ENSMUST00000180900 204 ntBASIC10.47□□□□□ -0.73
Trav13d-4A0A0G2JFX3 Gm5587-201ENSMUST00000206270 674 ntBASIC10.47□□□□□ -0.73
Trav13d-4A0A0G2JFX3 Metrn-201ENSMUST00000002344 987 ntAPPRIS P1 TSL 5 BASIC10.47□□□□□ -0.73
Trav13d-4A0A0G2JFX3 Odf3b-201ENSMUST00000049968 1040 ntAPPRIS P1 TSL 1 (best) BASIC10.47□□□□□ -0.73
Trav13d-4A0A0G2JFX3 Mtnr1b-201ENSMUST00000057920 1095 ntAPPRIS P1 TSL 1 (best) BASIC10.47□□□□□ -0.73
Trav13d-4A0A0G2JFX3 Rgs9bp-201ENSMUST00000069912 6590 ntAPPRIS P1 BASIC10.47□□□□□ -0.73
Trav13d-4A0A0G2JFX3 Tbx3os2-201ENSMUST00000135385 1345 ntTSL 1 (best) BASIC10.47□□□□□ -0.73
Trav13d-4A0A0G2JFX3 Gm2694-204ENSMUST00000181898 1303 ntTSL 1 (best) BASIC10.47□□□□□ -0.73
Trav13d-4A0A0G2JFX3 Syvn1-203ENSMUST00000134667 3159 ntAPPRIS P2 TSL 1 (best) BASIC10.47□□□□□ -0.73
Trav13d-4A0A0G2JFX3 Cdx2-201ENSMUST00000031650 2261 ntAPPRIS P1 TSL 1 (best) BASIC10.47□□□□□ -0.73
Trav13d-4A0A0G2JFX3 Gm16759-201ENSMUST00000126238 1393 ntTSL 1 (best) BASIC10.47□□□□□ -0.73
Trav13d-4A0A0G2JFX3 Tomm34-201ENSMUST00000018466 2302 ntAPPRIS P3 TSL 1 (best) BASIC10.47□□□□□ -0.73
Trav13d-4A0A0G2JFX3 Fgfr3-210ENSMUST00000169212 4245 ntAPPRIS P4 TSL 1 (best) BASIC10.47□□□□□ -0.73
Trav13d-4A0A0G2JFX3 Zfr2-201ENSMUST00000117798 3349 ntAPPRIS P1 TSL 5 BASIC10.47□□□□□ -0.73
Trav13d-4A0A0G2JFX3 Trim54-202ENSMUST00000202769 1408 ntAPPRIS ALT1 TSL 5 BASIC10.47□□□□□ -0.73
Trav13d-4A0A0G2JFX3 Ovol2-202ENSMUST00000103171 1547 ntAPPRIS ALT2 TSL 1 (best) BASIC10.47□□□□□ -0.73
Trav13d-4A0A0G2JFX3 Alx1-204ENSMUST00000217946 1542 ntTSL 5 BASIC10.47□□□□□ -0.73
Trav13d-4A0A0G2JFX3 Mindy1-212ENSMUST00000168223 1812 ntTSL 5 BASIC10.47□□□□□ -0.73
Trav13d-4A0A0G2JFX3 Mapk8ip1-202ENSMUST00000111279 3274 ntAPPRIS ALT2 TSL 1 (best) BASIC10.46□□□□□ -0.73
Trav13d-4A0A0G2JFX3 Ddc-210ENSMUST00000178704 2018 ntAPPRIS P1 TSL 1 (best) BASIC10.46□□□□□ -0.73
Trav13d-4A0A0G2JFX3 Camkk2-201ENSMUST00000111668 4861 ntAPPRIS ALT2 TSL 1 (best) BASIC10.46□□□□□ -0.73
Trav13d-4A0A0G2JFX3 Eif4g3-215ENSMUST00000203828 5289 ntTSL 5 BASIC10.46□□□□□ -0.73
Trav13d-4A0A0G2JFX3 Sra1-205ENSMUST00000173875 2360 ntAPPRIS ALT2 TSL 1 (best) BASIC10.46□□□□□ -0.73
Trav13d-4A0A0G2JFX3 Mdm1-202ENSMUST00000163238 2461 ntAPPRIS ALT2 TSL 1 (best) BASIC10.46□□□□□ -0.73
Trav13d-4A0A0G2JFX3 Zfp444-201ENSMUST00000054680 2467 ntAPPRIS P1 TSL 1 (best) BASIC10.46□□□□□ -0.73
Trav13d-4A0A0G2JFX3 Traf7-210ENSMUST00000176353 2503 ntTSL 1 (best) BASIC10.46□□□□□ -0.73
Trav13d-4A0A0G2JFX3 Efs-202ENSMUST00000227037 2540 ntBASIC10.46□□□□□ -0.73
Trav13d-4A0A0G2JFX3 Pde4a-201ENSMUST00000003395 2524 ntTSL 1 (best) BASIC10.46□□□□□ -0.73
Trav13d-4A0A0G2JFX3 Glis1-202ENSMUST00000106738 2744 ntAPPRIS ALT2 TSL 5 BASIC10.46□□□□□ -0.73
Trav13d-4A0A0G2JFX3 Zfp212-201ENSMUST00000009411 2801 ntAPPRIS P1 TSL 1 (best) BASIC10.46□□□□□ -0.73
Trav13d-4A0A0G2JFX3 Dbn1-203ENSMUST00000109923 2940 ntAPPRIS P3 TSL 1 (best) BASIC10.46□□□□□ -0.73
Trav13d-4A0A0G2JFX3 Ydjc-203ENSMUST00000115706 3097 ntTSL 1 (best) BASIC10.46□□□□□ -0.73
Trav13d-4A0A0G2JFX3 Patz1-202ENSMUST00000093402 3173 ntTSL 2 BASIC10.46□□□□□ -0.73
Trav13d-4A0A0G2JFX3 Rbm26-201ENSMUST00000022715 3633 ntTSL 5 BASIC10.46□□□□□ -0.73
Trav13d-4A0A0G2JFX3 Bola2-203ENSMUST00000130498 1266 ntAPPRIS P1 TSL 1 (best) BASIC10.46□□□□□ -0.73
Trav13d-4A0A0G2JFX3 Gm3264-202ENSMUST00000166776 882 ntAPPRIS ALT2 TSL 5 BASIC10.46□□□□□ -0.73
Trav13d-4A0A0G2JFX3 Rwdd1-201ENSMUST00000019917 1090 ntAPPRIS P1 TSL 1 (best) BASIC10.46□□□□□ -0.73
Trav13d-4A0A0G2JFX3 Gm10252-201ENSMUST00000209541 832 ntBASIC10.46□□□□□ -0.73
Trav13d-4A0A0G2JFX3 AC122465.1-201ENSMUST00000220813 1209 ntTSL 1 (best) BASIC10.46□□□□□ -0.73
Trav13d-4A0A0G2JFX3 AC130713.1-201ENSMUST00000228853 1096 ntBASIC10.46□□□□□ -0.73
Trav13d-4A0A0G2JFX3 Hint2-201ENSMUST00000030192 610 ntAPPRIS P1 TSL 1 (best) BASIC10.46□□□□□ -0.73
Trav13d-4A0A0G2JFX3 Grcc10-201ENSMUST00000004389 863 ntAPPRIS P1 TSL 1 (best) BASIC10.46□□□□□ -0.73
Trav13d-4A0A0G2JFX3 Romo1-201ENSMUST00000088610 569 ntAPPRIS P1 TSL 1 (best) BASIC10.46□□□□□ -0.73
Trav13d-4A0A0G2JFX3 Akt2-202ENSMUST00000085917 1392 ntTSL 5 BASIC10.46□□□□□ -0.74
Trav13d-4A0A0G2JFX3 Ppil1-201ENSMUST00000024802 1434 ntAPPRIS P1 TSL 1 (best) BASIC10.46□□□□□ -0.74
Trav13d-4A0A0G2JFX3 Snrpd2-201ENSMUST00000049294 1420 ntAPPRIS P1 TSL 1 (best) BASIC10.46□□□□□ -0.74
Trav13d-4A0A0G2JFX3 Ilvbl-204ENSMUST00000218271 1606 ntTSL 1 (best) BASIC10.46□□□□□ -0.74
Trav13d-4A0A0G2JFX3 Rabl2-201ENSMUST00000023294 1640 ntAPPRIS P1 TSL 1 (best) BASIC10.46□□□□□ -0.74
Trav13d-4A0A0G2JFX3 Gpr157-201ENSMUST00000094451 4900 ntAPPRIS P1 TSL 1 (best) BASIC10.46□□□□□ -0.74
Trav13d-4A0A0G2JFX3 Prkcz2-201ENSMUST00000206136 1756 ntBASIC10.46□□□□□ -0.74
Trav13d-4A0A0G2JFX3 Nat8f7-201ENSMUST00000160534 1822 ntAPPRIS P1 TSL 5 BASIC10.46□□□□□ -0.74
Trav13d-4A0A0G2JFX3 Nat8f3-201ENSMUST00000050780 1821 ntAPPRIS P1 TSL 1 (best) BASIC10.46□□□□□ -0.74
Trav13d-4A0A0G2JFX3 Gm37728-201ENSMUST00000195025 2292 ntBASIC10.46□□□□□ -0.74
Trav13d-4A0A0G2JFX3 Hdhd2-203ENSMUST00000097522 2318 ntAPPRIS P1 TSL 1 (best) BASIC10.46□□□□□ -0.74
Trav13d-4A0A0G2JFX3 Cct7-201ENSMUST00000032078 2441 ntAPPRIS P1 TSL 1 (best) BASIC10.46□□□□□ -0.74
Trav13d-4A0A0G2JFX3 Loxl4-203ENSMUST00000164786 2617 ntAPPRIS ALT2 TSL 1 (best) BASIC10.46□□□□□ -0.74
Trav13d-4A0A0G2JFX3 Grk6-207ENSMUST00000225925 2769 ntBASIC10.46□□□□□ -0.74
Trav13d-4A0A0G2JFX3 Otud6b-201ENSMUST00000117268 3266 ntAPPRIS P1 TSL 1 (best) BASIC10.46□□□□□ -0.74
Trav13d-4A0A0G2JFX3 Josd1-201ENSMUST00000023061 3394 ntAPPRIS P1 TSL 1 (best) BASIC10.46□□□□□ -0.74
Trav13d-4A0A0G2JFX3 Dlg1-201ENSMUST00000023454 3725 ntTSL 1 (best) BASIC10.46□□□□□ -0.74
Trav13d-4A0A0G2JFX3 Trim24-203ENSMUST00000120428 3940 ntAPPRIS ALT2 TSL 1 (best) BASIC10.46□□□□□ -0.74
Trav13d-4A0A0G2JFX3 Larp4b-202ENSMUST00000188211 5610 ntAPPRIS P1 TSL 1 (best) BASIC10.46□□□□□ -0.74
Trav13d-4A0A0G2JFX3 Tmem131l-202ENSMUST00000191758 5555 ntAPPRIS P2 TSL 1 (best) BASIC10.45□□□□□ -0.74
Trav13d-4A0A0G2JFX3 Papd5-203ENSMUST00000119033 4624 ntAPPRIS P1 TSL 1 (best) BASIC10.45□□□□□ -0.74
Trav13d-4A0A0G2JFX3 Zfp574-202ENSMUST00000179556 4140 ntAPPRIS P1 TSL 1 (best) BASIC10.45□□□□□ -0.74
Trav13d-4A0A0G2JFX3 Acss1-201ENSMUST00000028944 3618 ntAPPRIS P1 TSL 1 (best) BASIC10.45□□□□□ -0.74
Trav13d-4A0A0G2JFX3 Luc7l3-201ENSMUST00000021226 3373 ntTSL 1 (best) BASIC10.45□□□□□ -0.74
Trav13d-4A0A0G2JFX3 Tmem185b-202ENSMUST00000183952 2824 ntAPPRIS P1 BASIC10.45□□□□□ -0.74
Trav13d-4A0A0G2JFX3 Cyp2ab1-201ENSMUST00000023513 2720 ntTSL 5 BASIC10.45□□□□□ -0.74
Trav13d-4A0A0G2JFX3 Nf2-201ENSMUST00000053079 2470 ntAPPRIS ALT1 TSL 1 (best) BASIC10.45□□□□□ -0.74
Trav13d-4A0A0G2JFX3 Denr-201ENSMUST00000023869 2339 ntAPPRIS P1 TSL 1 (best) BASIC10.45□□□□□ -0.74
Trav13d-4A0A0G2JFX3 Zbp1-201ENSMUST00000029018 1989 ntAPPRIS P1 TSL 1 (best) BASIC10.45□□□□□ -0.74
Trav13d-4A0A0G2JFX3 Plch2-207ENSMUST00000139976 5322 ntAPPRIS P3 TSL 1 (best) BASIC10.45□□□□□ -0.74
Trav13d-4A0A0G2JFX3 Dcakd-201ENSMUST00000021313 1744 ntAPPRIS P1 TSL 1 (best) BASIC10.45□□□□□ -0.74
Trav13d-4A0A0G2JFX3 Ccbe1-202ENSMUST00000130300 1631 ntAPPRIS P1 TSL 1 (best) BASIC10.45□□□□□ -0.74
Trav13d-4A0A0G2JFX3 Gm14029-201ENSMUST00000151051 1348 ntTSL 1 (best) BASIC10.45□□□□□ -0.74
Trav13d-4A0A0G2JFX3 Fam159b-201ENSMUST00000043061 1310 ntAPPRIS P1 TSL 1 (best) BASIC10.45□□□□□ -0.74
Trav13d-4A0A0G2JFX3 Igfbp2-201ENSMUST00000047328 1307 ntAPPRIS P1 TSL 1 (best) BASIC10.45□□□□□ -0.74
Trav13d-4A0A0G2JFX3 Rcbtb1-202ENSMUST00000043227 3903 ntAPPRIS P1 TSL 1 (best) BASIC10.45□□□□□ -0.74
Trav13d-4A0A0G2JFX3 1810010H24Rik-201ENSMUST00000106767 1100 ntAPPRIS P2 TSL 2 BASIC10.45□□□□□ -0.74
Trav13d-4A0A0G2JFX3 Pdxdc1-203ENSMUST00000115803 1268 ntAPPRIS ALT2 TSL 5 BASIC10.45□□□□□ -0.74
Trav13d-4A0A0G2JFX3 Gssos2-201ENSMUST00000130859 727 ntTSL 3 BASIC10.45□□□□□ -0.74
Trav13d-4A0A0G2JFX3 Gm1818-201ENSMUST00000169406 1184 ntBASIC10.45□□□□□ -0.74
Trav13d-4A0A0G2JFX3 Gm26879-201ENSMUST00000181127 1176 ntTSL 1 (best) BASIC10.45□□□□□ -0.74
Trav13d-4A0A0G2JFX3 Gm29246-201ENSMUST00000189221 349 ntTSL 3 BASIC10.45□□□□□ -0.74
Trav13d-4A0A0G2JFX3 Pagr1a-203ENSMUST00000206416 558 ntTSL 3 BASIC10.45□□□□□ -0.74
Retrieved 100 of 76,532 protein–RNA pairs in 46 ms