Protein–RNA interactions for Protein: A0A0G2JFS9

Atg4a-ps, Cysteine protease, mousemouse

Predictions only

Length 396 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Atg4a-psA0A0G2JFS9 Flywch1-202ENSMUST00000086325 2443 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Atg4a-psA0A0G2JFS9 Whrn-207ENSMUST00000107393 4028 ntAPPRIS ALT2 TSL 1 (best) BASIC18.43■□□□□ 0.54
Atg4a-psA0A0G2JFS9 Gm5357-201ENSMUST00000212720 1924 ntBASIC18.43■□□□□ 0.54
Atg4a-psA0A0G2JFS9 Whrn-203ENSMUST00000084510 4049 ntAPPRIS P4 TSL 1 (best) BASIC18.43■□□□□ 0.54
Atg4a-psA0A0G2JFS9 Zswim4-201ENSMUST00000039480 4625 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Atg4a-psA0A0G2JFS9 Nt5c-202ENSMUST00000106530 836 ntTSL 3 BASIC18.43■□□□□ 0.54
Atg4a-psA0A0G2JFS9 Zfp125-202ENSMUST00000144811 704 ntTSL 5 BASIC18.43■□□□□ 0.54
Atg4a-psA0A0G2JFS9 Krtap19-3-201ENSMUST00000075284 526 ntAPPRIS P1 BASIC18.43■□□□□ 0.54
Atg4a-psA0A0G2JFS9 Gm10313-201ENSMUST00000095320 1002 ntBASIC18.43■□□□□ 0.54
Atg4a-psA0A0G2JFS9 Tspan32-204ENSMUST00000105923 1499 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
Atg4a-psA0A0G2JFS9 Mtcl1-201ENSMUST00000086693 7221 ntAPPRIS P3 TSL 1 (best) BASIC18.43■□□□□ 0.54
Atg4a-psA0A0G2JFS9 Zmynd11-207ENSMUST00000110638 4003 ntTSL 5 BASIC18.43■□□□□ 0.54
Atg4a-psA0A0G2JFS9 Camk2g-217ENSMUST00000226630 1937 ntBASIC18.43■□□□□ 0.54
Atg4a-psA0A0G2JFS9 Fbxl8-201ENSMUST00000036221 1901 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Atg4a-psA0A0G2JFS9 Zscan2-201ENSMUST00000044115 2310 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Atg4a-psA0A0G2JFS9 Spatc1-201ENSMUST00000074173 1605 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Atg4a-psA0A0G2JFS9 Gm8909-203ENSMUST00000173353 1428 ntAPPRIS ALT2 TSL 5 BASIC18.42■□□□□ 0.54
Atg4a-psA0A0G2JFS9 Pde1c-203ENSMUST00000164037 3068 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
Atg4a-psA0A0G2JFS9 Bicd2-203ENSMUST00000110085 4588 ntAPPRIS ALT2 TSL 1 (best) BASIC18.42■□□□□ 0.54
Atg4a-psA0A0G2JFS9 Mrpl58-203ENSMUST00000106539 2522 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
Atg4a-psA0A0G2JFS9 Prex1-201ENSMUST00000036719 6533 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Atg4a-psA0A0G2JFS9 Cyb5rl-204ENSMUST00000106760 840 ntTSL 3 BASIC18.42■□□□□ 0.54
Atg4a-psA0A0G2JFS9 Gm14140-201ENSMUST00000119999 995 ntBASIC18.42■□□□□ 0.54
Atg4a-psA0A0G2JFS9 Caly-202ENSMUST00000166758 1220 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Atg4a-psA0A0G2JFS9 Ccer2-201ENSMUST00000178767 1054 ntAPPRIS P1 TSL 5 BASIC18.42■□□□□ 0.54
Atg4a-psA0A0G2JFS9 St6galnac2-201ENSMUST00000079545 3643 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Atg4a-psA0A0G2JFS9 Ccdc154-202ENSMUST00000182292 1989 ntAPPRIS ALT2 TSL 5 BASIC18.42■□□□□ 0.54
Atg4a-psA0A0G2JFS9 Htr7-205ENSMUST00000166074 3079 ntTSL 5 BASIC18.42■□□□□ 0.54
Atg4a-psA0A0G2JFS9 Tmem116-203ENSMUST00000094357 1366 ntAPPRIS ALT2 TSL 5 BASIC18.42■□□□□ 0.54
Atg4a-psA0A0G2JFS9 Spock1-203ENSMUST00000185905 2794 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
Atg4a-psA0A0G2JFS9 Fbxw2-205ENSMUST00000113078 1872 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Atg4a-psA0A0G2JFS9 Gm28372-201ENSMUST00000188900 1876 ntAPPRIS P1 TSL 5 BASIC18.41■□□□□ 0.54
Atg4a-psA0A0G2JFS9 Zfp36l2-201ENSMUST00000060366 3530 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Atg4a-psA0A0G2JFS9 Htatip2-201ENSMUST00000085272 1418 ntAPPRIS P3 TSL 1 (best) BASIC18.41■□□□□ 0.54
Atg4a-psA0A0G2JFS9 Bmt2-202ENSMUST00000203078 4462 ntAPPRIS ALT2 TSL 1 (best) BASIC18.41■□□□□ 0.54
Atg4a-psA0A0G2JFS9 Smad3-201ENSMUST00000034973 5090 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Atg4a-psA0A0G2JFS9 Mfap2-203ENSMUST00000166376 890 ntAPPRIS P1 TSL 2 BASIC18.41■□□□□ 0.54
Atg4a-psA0A0G2JFS9 Cyhr1-204ENSMUST00000177359 1110 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
Atg4a-psA0A0G2JFS9 1700021A07Rik-203ENSMUST00000188024 404 ntTSL 3 BASIC18.41■□□□□ 0.54
Atg4a-psA0A0G2JFS9 Tma7-203ENSMUST00000192801 386 ntTSL 3 BASIC18.41■□□□□ 0.54
Atg4a-psA0A0G2JFS9 Gm44107-201ENSMUST00000203242 573 ntTSL 2 BASIC18.41■□□□□ 0.54
Atg4a-psA0A0G2JFS9 Bex3-201ENSMUST00000053540 930 ntAPPRIS P3 TSL 1 (best) BASIC18.41■□□□□ 0.54
Atg4a-psA0A0G2JFS9 Meaf6-201ENSMUST00000055213 872 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
Atg4a-psA0A0G2JFS9 Tpm2-202ENSMUST00000107913 2098 ntAPPRIS P3 TSL 1 (best) BASIC18.41■□□□□ 0.54
Atg4a-psA0A0G2JFS9 Dcaf5-201ENSMUST00000054145 5706 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Atg4a-psA0A0G2JFS9 Slc30a5-201ENSMUST00000067246 3179 ntAPPRIS P2 TSL 1 (best) BASIC18.41■□□□□ 0.54
Atg4a-psA0A0G2JFS9 Plch2-212ENSMUST00000186598 2119 ntTSL 5 BASIC18.41■□□□□ 0.54
Atg4a-psA0A0G2JFS9 Usp6nl-202ENSMUST00000114937 7484 ntAPPRIS ALT2 TSL 1 (best) BASIC18.41■□□□□ 0.54
Atg4a-psA0A0G2JFS9 Idh3b-201ENSMUST00000028892 1616 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Atg4a-psA0A0G2JFS9 Ube2d3-212ENSMUST00000197859 3833 ntAPPRIS P2 TSL 1 (best) BASIC18.41■□□□□ 0.54
Atg4a-psA0A0G2JFS9 Shisa7-201ENSMUST00000066041 6006 ntAPPRIS ALT2 TSL 1 (best) BASIC18.41■□□□□ 0.54
Atg4a-psA0A0G2JFS9 Pqbp1-202ENSMUST00000115654 1374 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Atg4a-psA0A0G2JFS9 Aen-201ENSMUST00000107421 2007 ntAPPRIS ALT2 TSL 1 (best) BASIC18.4■□□□□ 0.54
Atg4a-psA0A0G2JFS9 Ube2j1-202ENSMUST00000124992 3530 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Atg4a-psA0A0G2JFS9 Sesn1-202ENSMUST00000099931 3809 ntAPPRIS ALT1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Atg4a-psA0A0G2JFS9 Fam133b-201ENSMUST00000115527 1491 ntAPPRIS P2 TSL 1 (best) BASIC18.4■□□□□ 0.54
Atg4a-psA0A0G2JFS9 Sh3glb1-202ENSMUST00000198254 5945 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
Atg4a-psA0A0G2JFS9 Acvr2a-201ENSMUST00000063886 5686 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Atg4a-psA0A0G2JFS9 Pald1-201ENSMUST00000020289 4282 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Atg4a-psA0A0G2JFS9 Top3b-201ENSMUST00000023465 3073 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Atg4a-psA0A0G2JFS9 Gnpda2-202ENSMUST00000120789 1594 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
Atg4a-psA0A0G2JFS9 Gemin7-204ENSMUST00000122055 609 ntAPPRIS P1 TSL 3 BASIC18.4■□□□□ 0.54
Atg4a-psA0A0G2JFS9 Rps27l-203ENSMUST00000127896 575 ntTSL 5 BASIC18.4■□□□□ 0.54
Atg4a-psA0A0G2JFS9 Dusp3-205ENSMUST00000143177 391 ntTSL 3 BASIC18.4■□□□□ 0.54
Atg4a-psA0A0G2JFS9 Hsf4-203ENSMUST00000172525 1276 ntTSL 5 BASIC18.4■□□□□ 0.54
Atg4a-psA0A0G2JFS9 Rpl31-205ENSMUST00000194746 703 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
Atg4a-psA0A0G2JFS9 Tamm41-201ENSMUST00000032461 1168 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Atg4a-psA0A0G2JFS9 Pmm1-202ENSMUST00000071462 1059 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
Atg4a-psA0A0G2JFS9 Simc1-202ENSMUST00000121401 4819 ntAPPRIS P2 TSL 5 BASIC18.4■□□□□ 0.54
Atg4a-psA0A0G2JFS9 Pprc1-203ENSMUST00000111899 5246 ntAPPRIS P2 TSL 1 (best) BASIC18.4■□□□□ 0.54
Atg4a-psA0A0G2JFS9 Repin1-207ENSMUST00000163452 2959 ntAPPRIS P3 TSL 1 (best) BASIC18.4■□□□□ 0.54
Atg4a-psA0A0G2JFS9 Nup88-202ENSMUST00000108530 2389 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Atg4a-psA0A0G2JFS9 Tgfb2-201ENSMUST00000045288 5116 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Atg4a-psA0A0G2JFS9 Arhgef10l-206ENSMUST00000105799 4508 ntAPPRIS ALT2 TSL 5 BASIC18.4■□□□□ 0.54
Atg4a-psA0A0G2JFS9 Cdhr5-201ENSMUST00000080654 2133 ntAPPRIS P3 TSL 1 (best) BASIC18.4■□□□□ 0.54
Atg4a-psA0A0G2JFS9 Git2-204ENSMUST00000112185 5032 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
Atg4a-psA0A0G2JFS9 Cep152-201ENSMUST00000089776 5768 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Atg4a-psA0A0G2JFS9 Atp8b1-201ENSMUST00000025482 6440 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Atg4a-psA0A0G2JFS9 Rrnad1-206ENSMUST00000160074 1620 ntTSL 5 BASIC18.39■□□□□ 0.53
Atg4a-psA0A0G2JFS9 2310011J03Rik-201ENSMUST00000020341 1649 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Atg4a-psA0A0G2JFS9 Tcf3-206ENSMUST00000105342 2928 ntAPPRIS ALT2 TSL 1 (best) BASIC18.39■□□□□ 0.53
Atg4a-psA0A0G2JFS9 Lhx1os-201ENSMUST00000126072 589 ntTSL 3 BASIC18.39■□□□□ 0.53
Atg4a-psA0A0G2JFS9 Pcp2-205ENSMUST00000142431 524 ntTSL 2 BASIC18.39■□□□□ 0.53
Atg4a-psA0A0G2JFS9 4930570G19Rik-204ENSMUST00000149387 986 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
Atg4a-psA0A0G2JFS9 A830052D11Rik-201ENSMUST00000181729 1130 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
Atg4a-psA0A0G2JFS9 Timm13-204ENSMUST00000219896 542 ntTSL 3 BASIC18.39■□□□□ 0.53
Atg4a-psA0A0G2JFS9 Hgfac-201ENSMUST00000030985 2135 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Atg4a-psA0A0G2JFS9 Sf3b6-201ENSMUST00000046207 1180 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Atg4a-psA0A0G2JFS9 Mrpl34-201ENSMUST00000048914 607 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Atg4a-psA0A0G2JFS9 Ndufv3-202ENSMUST00000064798 485 ntAPPRIS ALT2 TSL 1 (best) BASIC18.39■□□□□ 0.53
Atg4a-psA0A0G2JFS9 Mxra8os-201ENSMUST00000097740 687 ntBASIC18.39■□□□□ 0.53
Atg4a-psA0A0G2JFS9 Pacs1-201ENSMUST00000025786 4339 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Atg4a-psA0A0G2JFS9 Crocc-203ENSMUST00000102491 6582 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Atg4a-psA0A0G2JFS9 Gm5069-201ENSMUST00000050581 1328 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
Atg4a-psA0A0G2JFS9 Mtg2-201ENSMUST00000087563 1346 ntAPPRIS P1 TSL 5 BASIC18.39■□□□□ 0.53
Atg4a-psA0A0G2JFS9 Kif12-201ENSMUST00000030042 2250 ntAPPRIS P2 TSL 1 (best) BASIC18.39■□□□□ 0.53
Atg4a-psA0A0G2JFS9 Trnt1-201ENSMUST00000057578 2283 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Atg4a-psA0A0G2JFS9 Syne4-201ENSMUST00000054594 1355 ntAPPRIS P3 TSL 1 (best) BASIC18.39■□□□□ 0.53
Atg4a-psA0A0G2JFS9 Klhl12-202ENSMUST00000112232 3220 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
Atg4a-psA0A0G2JFS9 Strn4-201ENSMUST00000019220 3535 ntAPPRIS P4 TSL 1 (best) BASIC18.39■□□□□ 0.53
Retrieved 100 of 76,532 protein–RNA pairs in 49.6 ms