Protein–RNA interactions for Protein: A0A0G2JF94

Trav14-1, T cell receptor alpha variable 14-1 (Fragment), mousemouse

Predictions only

Length 121 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav14-1A0A0G2JF94 Ggn-205ENSMUST00000209019 2148 ntAPPRIS ALT2 TSL 1 (best) BASIC10.08□□□□□ -0.8
Trav14-1A0A0G2JF94 AL669916.2-201ENSMUST00000213219 358 ntTSL 2 BASIC10.08□□□□□ -0.8
Trav14-1A0A0G2JF94 Il3ra-205ENSMUST00000224877 1128 ntAPPRIS ALT2 BASIC10.08□□□□□ -0.8
Trav14-1A0A0G2JF94 Nxt1-201ENSMUST00000047177 956 ntAPPRIS P1 TSL 1 (best) BASIC10.08□□□□□ -0.8
Trav14-1A0A0G2JF94 Myoz1-201ENSMUST00000090469 1289 ntAPPRIS P1 TSL 1 (best) BASIC10.08□□□□□ -0.8
Trav14-1A0A0G2JF94 Comtd1-202ENSMUST00000124549 2314 ntAPPRIS P2 TSL 1 (best) BASIC10.08□□□□□ -0.8
Trav14-1A0A0G2JF94 Prdm5-201ENSMUST00000031973 1488 ntTSL 1 (best) BASIC10.08□□□□□ -0.8
Trav14-1A0A0G2JF94 Hoxd12-201ENSMUST00000001878 2534 ntAPPRIS P1 TSL 1 (best) BASIC10.08□□□□□ -0.8
Trav14-1A0A0G2JF94 Ercc6l2-202ENSMUST00000021926 1592 ntTSL 1 (best) BASIC10.08□□□□□ -0.8
Trav14-1A0A0G2JF94 Nrap-201ENSMUST00000040711 5334 ntAPPRIS ALT2 TSL 1 (best) BASIC10.08□□□□□ -0.8
Trav14-1A0A0G2JF94 Zfp553-201ENSMUST00000056232 3043 ntAPPRIS P1 TSL 1 (best) BASIC10.08□□□□□ -0.8
Trav14-1A0A0G2JF94 Ccno-201ENSMUST00000038404 1875 ntAPPRIS P1 TSL 1 (best) BASIC10.08□□□□□ -0.8
Trav14-1A0A0G2JF94 Dnase2a-202ENSMUST00000109744 1958 ntAPPRIS ALT2 TSL 1 (best) BASIC10.08□□□□□ -0.8
Trav14-1A0A0G2JF94 Gimap3-201ENSMUST00000038811 1968 ntAPPRIS P1 TSL 2 BASIC10.08□□□□□ -0.8
Trav14-1A0A0G2JF94 Phka1-201ENSMUST00000043596 5938 ntAPPRIS ALT2 TSL 1 (best) BASIC10.08□□□□□ -0.8
Trav14-1A0A0G2JF94 Plch2-201ENSMUST00000105631 5053 ntAPPRIS ALT2 TSL 5 BASIC10.08□□□□□ -0.8
Trav14-1A0A0G2JF94 Fbln1-202ENSMUST00000109432 2273 ntAPPRIS ALT2 TSL 1 (best) BASIC10.08□□□□□ -0.8
Trav14-1A0A0G2JF94 4933421O10Rik-201ENSMUST00000155691 3847 ntTSL 1 (best) BASIC10.08□□□□□ -0.8
Trav14-1A0A0G2JF94 Ebf3-208ENSMUST00000210774 2994 ntTSL 1 (best) BASIC10.08□□□□□ -0.8
Trav14-1A0A0G2JF94 Phldb1-214ENSMUST00000147495 5424 ntAPPRIS P5 TSL 5 BASIC10.08□□□□□ -0.8
Trav14-1A0A0G2JF94 Steap2-202ENSMUST00000115424 3285 ntAPPRIS P1 TSL 1 (best) BASIC10.08□□□□□ -0.8
Trav14-1A0A0G2JF94 Gmppa-201ENSMUST00000037796 1539 ntAPPRIS P1 TSL 1 (best) BASIC10.07□□□□□ -0.8
Trav14-1A0A0G2JF94 Rtf1-201ENSMUST00000028767 4664 ntAPPRIS P1 TSL 1 (best) BASIC10.07□□□□□ -0.8
Trav14-1A0A0G2JF94 Cgn-203ENSMUST00000153263 2210 ntTSL 2 BASIC10.07□□□□□ -0.8
Trav14-1A0A0G2JF94 Gnat1-201ENSMUST00000010205 2328 ntAPPRIS P1 TSL 1 (best) BASIC10.07□□□□□ -0.8
Trav14-1A0A0G2JF94 Ints10-203ENSMUST00000110241 2322 ntTSL 1 (best) BASIC10.07□□□□□ -0.8
Trav14-1A0A0G2JF94 Hhat-201ENSMUST00000044190 2839 ntAPPRIS P2 TSL 1 (best) BASIC10.07□□□□□ -0.8
Trav14-1A0A0G2JF94 Plch2-210ENSMUST00000176194 5619 ntAPPRIS ALT2 TSL 5 BASIC10.07□□□□□ -0.8
Trav14-1A0A0G2JF94 Pde12-201ENSMUST00000052932 7725 ntAPPRIS P1 TSL 1 (best) BASIC10.07□□□□□ -0.8
Trav14-1A0A0G2JF94 Gypc-203ENSMUST00000174459 2180 ntAPPRIS P3 TSL 1 (best) BASIC10.07□□□□□ -0.8
Trav14-1A0A0G2JF94 Ccdc154-202ENSMUST00000182292 1989 ntAPPRIS ALT2 TSL 5 BASIC10.07□□□□□ -0.8
Trav14-1A0A0G2JF94 Ldb3-208ENSMUST00000228044 1883 ntAPPRIS ALT2 BASIC10.07□□□□□ -0.8
Trav14-1A0A0G2JF94 Ntng2-210ENSMUST00000177689 1679 ntAPPRIS ALT2 TSL 5 BASIC10.07□□□□□ -0.8
Trav14-1A0A0G2JF94 B020017C02Rik-201ENSMUST00000197444 1688 ntBASIC10.07□□□□□ -0.8
Trav14-1A0A0G2JF94 Dlgap4-204ENSMUST00000109566 1595 ntAPPRIS ALT2 TSL 1 (best) BASIC10.07□□□□□ -0.8
Trav14-1A0A0G2JF94 Eif4e2-205ENSMUST00000113232 1125 ntTSL 1 (best) BASIC10.07□□□□□ -0.8
Trav14-1A0A0G2JF94 Gm8344-201ENSMUST00000119813 856 ntBASIC10.07□□□□□ -0.8
Trav14-1A0A0G2JF94 Lyzl4-202ENSMUST00000120918 959 ntAPPRIS P1 TSL 1 (best) BASIC10.07□□□□□ -0.8
Trav14-1A0A0G2JF94 Pafah1b3-207ENSMUST00000155118 679 ntTSL 1 (best) BASIC10.07□□□□□ -0.8
Trav14-1A0A0G2JF94 Tppp3-202ENSMUST00000176419 719 ntAPPRIS P1 TSL 1 (best) BASIC10.07□□□□□ -0.8
Trav14-1A0A0G2JF94 Gm27742-201ENSMUST00000184667 60 ntBASIC10.07□□□□□ -0.8
Trav14-1A0A0G2JF94 Ten1-201ENSMUST00000021130 902 ntAPPRIS P1 TSL 1 (best) BASIC10.07□□□□□ -0.8
Trav14-1A0A0G2JF94 Rpl36al-201ENSMUST00000054544 526 ntAPPRIS P1 TSL 1 (best) BASIC10.07□□□□□ -0.8
Trav14-1A0A0G2JF94 Gm9991-201ENSMUST00000070048 1207 ntTSL 1 (best) BASIC10.07□□□□□ -0.8
Trav14-1A0A0G2JF94 Sumo1-201ENSMUST00000091374 1215 ntAPPRIS P1 TSL 1 (best) BASIC10.07□□□□□ -0.8
Trav14-1A0A0G2JF94 Smyd4-201ENSMUST00000044530 3517 ntAPPRIS P1 TSL 1 (best) BASIC10.07□□□□□ -0.8
Trav14-1A0A0G2JF94 Zfp202-203ENSMUST00000168832 3329 ntTSL 1 (best) BASIC10.07□□□□□ -0.8
Trav14-1A0A0G2JF94 Camk2d-204ENSMUST00000106400 2722 ntAPPRIS P3 TSL 1 (best) BASIC10.07□□□□□ -0.8
Trav14-1A0A0G2JF94 Erlec1-201ENSMUST00000073192 2532 ntAPPRIS P1 TSL 1 (best) BASIC10.07□□□□□ -0.8
Trav14-1A0A0G2JF94 Mtss1-201ENSMUST00000080371 4938 ntAPPRIS P1 TSL 1 (best) BASIC10.07□□□□□ -0.8
Trav14-1A0A0G2JF94 Fam219a-201ENSMUST00000108049 3296 ntTSL 1 (best) BASIC10.07□□□□□ -0.8
Trav14-1A0A0G2JF94 Ubn2-201ENSMUST00000039127 4243 ntAPPRIS ALT2 TSL 1 (best) BASIC10.07□□□□□ -0.8
Trav14-1A0A0G2JF94 Acbd5-206ENSMUST00000155602 1714 ntAPPRIS ALT2 TSL 2 BASIC10.07□□□□□ -0.8
Trav14-1A0A0G2JF94 Actn3-201ENSMUST00000006626 2880 ntAPPRIS P1 TSL 1 (best) BASIC10.07□□□□□ -0.8
Trav14-1A0A0G2JF94 Pdzd4-202ENSMUST00000114438 3625 ntAPPRIS ALT2 TSL 1 (best) BASIC10.07□□□□□ -0.8
Trav14-1A0A0G2JF94 Ndufv2-203ENSMUST00000143987 1540 ntAPPRIS P1 TSL 1 (best) BASIC10.07□□□□□ -0.8
Trav14-1A0A0G2JF94 Tm6sf2-202ENSMUST00000110160 1446 ntAPPRIS ALT1 TSL 1 (best) BASIC10.07□□□□□ -0.8
Trav14-1A0A0G2JF94 Otol1-201ENSMUST00000053013 2161 ntAPPRIS P1 TSL 1 (best) BASIC10.07□□□□□ -0.8
Trav14-1A0A0G2JF94 Kdm5c-202ENSMUST00000112584 5900 ntAPPRIS ALT2 TSL 5 BASIC10.06□□□□□ -0.8
Trav14-1A0A0G2JF94 Lrp11-201ENSMUST00000019931 3386 ntAPPRIS P2 TSL 1 (best) BASIC10.06□□□□□ -0.8
Trav14-1A0A0G2JF94 St7l-211ENSMUST00000200132 2636 ntAPPRIS ALT2 TSL 1 (best) BASIC10.06□□□□□ -0.8
Trav14-1A0A0G2JF94 Ier5-201ENSMUST00000055322 3276 ntAPPRIS P1 BASIC10.06□□□□□ -0.8
Trav14-1A0A0G2JF94 Gpr3-202ENSMUST00000105911 2518 ntAPPRIS P1 BASIC10.06□□□□□ -0.8
Trav14-1A0A0G2JF94 Pomgnt2-206ENSMUST00000216669 2504 ntAPPRIS P1 TSL 1 (best) BASIC10.06□□□□□ -0.8
Trav14-1A0A0G2JF94 Slc41a3-202ENSMUST00000044019 2412 ntTSL 1 (best) BASIC10.06□□□□□ -0.8
Trav14-1A0A0G2JF94 Hmga2-201ENSMUST00000072777 3710 ntAPPRIS P1 TSL 1 (best) BASIC10.06□□□□□ -0.8
Trav14-1A0A0G2JF94 Ntng2-203ENSMUST00000091153 1695 ntAPPRIS ALT2 TSL 1 (best) BASIC10.06□□□□□ -0.8
Trav14-1A0A0G2JF94 Atp6v1b1-206ENSMUST00000206911 1591 ntTSL 1 (best) BASIC10.06□□□□□ -0.8
Trav14-1A0A0G2JF94 Cnot7-206ENSMUST00000135269 2461 ntTSL 1 (best) BASIC10.06□□□□□ -0.8
Trav14-1A0A0G2JF94 Sbno2-204ENSMUST00000217972 2462 ntTSL 2 BASIC10.06□□□□□ -0.8
Trav14-1A0A0G2JF94 Gm12216-201ENSMUST00000117316 1152 ntAPPRIS ALT2 TSL 1 (best) BASIC10.06□□□□□ -0.8
Trav14-1A0A0G2JF94 Gm15165-201ENSMUST00000118140 502 ntBASIC10.06□□□□□ -0.8
Trav14-1A0A0G2JF94 Gm16272-201ENSMUST00000128218 388 ntTSL 2 BASIC10.06□□□□□ -0.8
Trav14-1A0A0G2JF94 BC028777-201ENSMUST00000137883 985 ntTSL 1 (best) BASIC10.06□□□□□ -0.8
Trav14-1A0A0G2JF94 Gm15545-202ENSMUST00000141011 899 ntTSL 3 BASIC10.06□□□□□ -0.8
Trav14-1A0A0G2JF94 Jpx-202ENSMUST00000182447 712 ntTSL 3 BASIC10.06□□□□□ -0.8
Trav14-1A0A0G2JF94 Eloc-203ENSMUST00000185771 742 ntAPPRIS P1 TSL 5 BASIC10.06□□□□□ -0.8
Trav14-1A0A0G2JF94 Msh3-205ENSMUST00000187424 666 ntTSL 2 BASIC10.06□□□□□ -0.8
Trav14-1A0A0G2JF94 AV026068-207ENSMUST00000187718 400 ntTSL 5 BASIC10.06□□□□□ -0.8
Trav14-1A0A0G2JF94 Gm45890-204ENSMUST00000212356 545 ntTSL 2 BASIC10.06□□□□□ -0.8
Trav14-1A0A0G2JF94 Vti1a-206ENSMUST00000225529 1244 ntBASIC10.06□□□□□ -0.8
Trav14-1A0A0G2JF94 AC117588.1-201ENSMUST00000228510 999 ntBASIC10.06□□□□□ -0.8
Trav14-1A0A0G2JF94 Nectin2-201ENSMUST00000075447 2735 ntAPPRIS P3 TSL 1 (best) BASIC10.06□□□□□ -0.8
Trav14-1A0A0G2JF94 Dcakd-201ENSMUST00000021313 1744 ntAPPRIS P1 TSL 1 (best) BASIC10.06□□□□□ -0.8
Trav14-1A0A0G2JF94 Fubp3-201ENSMUST00000055244 3648 ntTSL 1 (best) BASIC10.06□□□□□ -0.8
Trav14-1A0A0G2JF94 Wdtc1-202ENSMUST00000105906 4057 ntTSL 5 BASIC10.06□□□□□ -0.8
Trav14-1A0A0G2JF94 Zyx-207ENSMUST00000203652 2605 ntAPPRIS P3 TSL 1 (best) BASIC10.06□□□□□ -0.8
Trav14-1A0A0G2JF94 Gm37912-201ENSMUST00000191895 3076 ntBASIC10.06□□□□□ -0.8
Trav14-1A0A0G2JF94 Adam9-202ENSMUST00000084035 3985 ntAPPRIS ALT2 TSL 1 (best) BASIC10.06□□□□□ -0.8
Trav14-1A0A0G2JF94 Ccdc68-201ENSMUST00000043929 1618 ntAPPRIS P2 TSL 1 (best) BASIC10.06□□□□□ -0.8
Trav14-1A0A0G2JF94 Trim2-203ENSMUST00000107691 7428 ntAPPRIS P1 TSL 1 (best) BASIC10.06□□□□□ -0.8
Trav14-1A0A0G2JF94 Lamc2-201ENSMUST00000027753 5164 ntAPPRIS P1 TSL 5 BASIC10.06□□□□□ -0.8
Trav14-1A0A0G2JF94 Steap2-205ENSMUST00000115427 3470 ntTSL 1 (best) BASIC10.06□□□□□ -0.8
Trav14-1A0A0G2JF94 Auh-201ENSMUST00000021913 1320 ntAPPRIS P1 TSL 1 (best) BASIC10.06□□□□□ -0.8
Trav14-1A0A0G2JF94 CT010456.1-201ENSMUST00000222465 1688 ntTSL 5 BASIC10.06□□□□□ -0.8
Trav14-1A0A0G2JF94 Glis1-202ENSMUST00000106738 2744 ntAPPRIS ALT2 TSL 5 BASIC10.06□□□□□ -0.8
Trav14-1A0A0G2JF94 Rrp8-201ENSMUST00000033179 3053 ntAPPRIS P3 TSL 1 (best) BASIC10.05□□□□□ -0.8
Trav14-1A0A0G2JF94 Slc35c2-203ENSMUST00000109299 1926 ntAPPRIS P1 TSL 1 (best) BASIC10.05□□□□□ -0.8
Trav14-1A0A0G2JF94 Gm5049-201ENSMUST00000195878 1590 ntBASIC10.05□□□□□ -0.8
Trav14-1A0A0G2JF94 Tstd3-201ENSMUST00000029915 1588 ntAPPRIS P1 TSL 1 (best) BASIC10.05□□□□□ -0.8
Retrieved 100 of 76,532 protein–RNA pairs in 47.2 ms