Protein–RNA interactions for Protein: A0A0A6YY83

Pcdh7, Protocadherin 7, mousemouse

Predictions only

Length 1,255 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdh7A0A0A6YY83 AC130669.1-201ENSMUST00000228537 1672 ntBASIC15.61■□□□□ 0.09
Pcdh7A0A0A6YY83 Sec24a-202ENSMUST00000064297 2104 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
Pcdh7A0A0A6YY83 Atp2b3-203ENSMUST00000114479 4637 ntAPPRIS ALT2 TSL 5 BASIC15.61■□□□□ 0.09
Pcdh7A0A0A6YY83 Phldb1-211ENSMUST00000135436 2844 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
Pcdh7A0A0A6YY83 Trmt6-201ENSMUST00000039554 2828 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Pcdh7A0A0A6YY83 Supt5-208ENSMUST00000209141 3755 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Pcdh7A0A0A6YY83 Gypc-203ENSMUST00000174459 2180 ntAPPRIS P3 TSL 1 (best) BASIC15.61■□□□□ 0.09
Pcdh7A0A0A6YY83 Acin1-224ENSMUST00000167015 1746 ntAPPRIS ALT2 TSL 1 (best) BASIC15.61■□□□□ 0.09
Pcdh7A0A0A6YY83 Mcub-204ENSMUST00000153506 1005 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
Pcdh7A0A0A6YY83 Hrh3-204ENSMUST00000165248 1224 ntAPPRIS ALT2 TSL 5 BASIC15.61■□□□□ 0.09
Pcdh7A0A0A6YY83 Rps2-ps5-201ENSMUST00000184266 849 ntBASIC15.61■□□□□ 0.09
Pcdh7A0A0A6YY83 1700021A07Rik-203ENSMUST00000188024 404 ntTSL 3 BASIC15.61■□□□□ 0.09
Pcdh7A0A0A6YY83 Ap2s1-204ENSMUST00000205607 372 ntTSL 3 BASIC15.61■□□□□ 0.09
Pcdh7A0A0A6YY83 Zfp787-206ENSMUST00000208746 535 ntTSL 2 BASIC15.61■□□□□ 0.09
Pcdh7A0A0A6YY83 Pam-210ENSMUST00000161567 3630 ntAPPRIS ALT2 TSL 5 BASIC15.61■□□□□ 0.09
Pcdh7A0A0A6YY83 Lhx3-201ENSMUST00000028302 2223 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Pcdh7A0A0A6YY83 Kmt5c-202ENSMUST00000108582 2774 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Pcdh7A0A0A6YY83 Fnbp1-208ENSMUST00000113560 4726 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Pcdh7A0A0A6YY83 Gnb2-212ENSMUST00000150063 1569 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Pcdh7A0A0A6YY83 Tmpo-201ENSMUST00000020123 3772 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Pcdh7A0A0A6YY83 Ppp2r1b-211ENSMUST00000176798 2074 ntAPPRIS ALT2 TSL 5 BASIC15.61■□□□□ 0.09
Pcdh7A0A0A6YY83 Tbc1d1-203ENSMUST00000119756 4760 ntAPPRIS ALT2 TSL 1 (best) BASIC15.61■□□□□ 0.09
Pcdh7A0A0A6YY83 Slc43a3-201ENSMUST00000090726 2583 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Pcdh7A0A0A6YY83 Enah-204ENSMUST00000111030 2844 ntAPPRIS ALT2 TSL 1 (best) BASIC15.61■□□□□ 0.09
Pcdh7A0A0A6YY83 Enah-212ENSMUST00000195059 2832 ntAPPRIS ALT2 TSL 1 (best) BASIC15.61■□□□□ 0.09
Pcdh7A0A0A6YY83 Nhlh2-202ENSMUST00000196324 2647 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Pcdh7A0A0A6YY83 Pola2-201ENSMUST00000025752 2424 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
Pcdh7A0A0A6YY83 Abi2-206ENSMUST00000188594 1658 ntTSL 5 BASIC15.6■□□□□ 0.09
Pcdh7A0A0A6YY83 Tmem82-201ENSMUST00000053263 1671 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
Pcdh7A0A0A6YY83 Ilvbl-209ENSMUST00000218885 2233 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
Pcdh7A0A0A6YY83 Tacstd2-201ENSMUST00000058178 1735 ntAPPRIS P1 BASIC15.6■□□□□ 0.09
Pcdh7A0A0A6YY83 Tspan32-204ENSMUST00000105923 1499 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
Pcdh7A0A0A6YY83 Stap2-201ENSMUST00000043785 1491 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
Pcdh7A0A0A6YY83 Gnb1-201ENSMUST00000030940 3131 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
Pcdh7A0A0A6YY83 Mtus2-204ENSMUST00000110514 1532 ntTSL 5 BASIC15.6■□□□□ 0.09
Pcdh7A0A0A6YY83 6430710C18Rik-203ENSMUST00000136807 1540 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
Pcdh7A0A0A6YY83 Stk40-201ENSMUST00000094761 3492 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
Pcdh7A0A0A6YY83 Coch-202ENSMUST00000164782 2681 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
Pcdh7A0A0A6YY83 Lyrm1-203ENSMUST00000106517 1279 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
Pcdh7A0A0A6YY83 Ccl27a-217ENSMUST00000155240 343 ntTSL 2 BASIC15.6■□□□□ 0.09
Pcdh7A0A0A6YY83 Avpi1-201ENSMUST00000018965 1044 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
Pcdh7A0A0A6YY83 2010010A06Rik-203ENSMUST00000190465 650 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
Pcdh7A0A0A6YY83 Timm9-205ENSMUST00000221178 529 ntTSL 3 BASIC15.6■□□□□ 0.09
Pcdh7A0A0A6YY83 Gm10313-201ENSMUST00000095320 1002 ntBASIC15.6■□□□□ 0.09
Pcdh7A0A0A6YY83 Cdadc1-204ENSMUST00000171683 1892 ntAPPRIS ALT2 TSL 1 (best) BASIC15.6■□□□□ 0.09
Pcdh7A0A0A6YY83 Slc12a5-207ENSMUST00000202223 5690 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
Pcdh7A0A0A6YY83 Fastk-203ENSMUST00000115043 3056 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
Pcdh7A0A0A6YY83 Ubr3-201ENSMUST00000055758 8072 ntAPPRIS P2 TSL 1 (best) BASIC15.6■□□□□ 0.09
Pcdh7A0A0A6YY83 Pqbp1-202ENSMUST00000115654 1374 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
Pcdh7A0A0A6YY83 Tmem200c-201ENSMUST00000178545 3213 ntAPPRIS P1 TSL 2 BASIC15.6■□□□□ 0.09
Pcdh7A0A0A6YY83 Cyp2a5-201ENSMUST00000005685 2013 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
Pcdh7A0A0A6YY83 Arsi-201ENSMUST00000040359 2975 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
Pcdh7A0A0A6YY83 Met-203ENSMUST00000115443 6809 ntAPPRIS P1 TSL 5 BASIC15.6■□□□□ 0.09
Pcdh7A0A0A6YY83 Pogk-204ENSMUST00000135673 2433 ntAPPRIS ALT2 TSL 1 (best) BASIC15.59■□□□□ 0.09
Pcdh7A0A0A6YY83 Ankrd13a-201ENSMUST00000102578 3717 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Pcdh7A0A0A6YY83 Ppp4r3a-202ENSMUST00000163095 4083 ntTSL 5 BASIC15.59■□□□□ 0.09
Pcdh7A0A0A6YY83 Tpgs2-202ENSMUST00000148255 3424 ntAPPRIS ALT2 TSL 1 (best) BASIC15.59■□□□□ 0.09
Pcdh7A0A0A6YY83 Mapk8ip3-205ENSMUST00000119115 4173 ntAPPRIS ALT2 TSL 1 (best) BASIC15.59■□□□□ 0.09
Pcdh7A0A0A6YY83 Fam184a-201ENSMUST00000020003 4164 ntAPPRIS P1 TSL 5 BASIC15.59■□□□□ 0.09
Pcdh7A0A0A6YY83 Sfta3-ps-205ENSMUST00000220379 2187 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
Pcdh7A0A0A6YY83 Rbm26-202ENSMUST00000100327 3634 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Pcdh7A0A0A6YY83 Foxg1-204ENSMUST00000179669 3973 ntAPPRIS P1 BASIC15.59■□□□□ 0.09
Pcdh7A0A0A6YY83 Rhpn1-202ENSMUST00000121137 2283 ntAPPRIS ALT2 TSL 1 (best) BASIC15.59■□□□□ 0.09
Pcdh7A0A0A6YY83 Gm36445-203ENSMUST00000209951 1597 ntTSL 5 BASIC15.59■□□□□ 0.09
Pcdh7A0A0A6YY83 Dnajc1-209ENSMUST00000166495 5497 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Pcdh7A0A0A6YY83 Bclaf3-202ENSMUST00000112464 3366 ntAPPRIS P2 TSL 1 (best) BASIC15.59■□□□□ 0.09
Pcdh7A0A0A6YY83 Apoa5-201ENSMUST00000034584 2312 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Pcdh7A0A0A6YY83 Grtp1-201ENSMUST00000165605 1271 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
Pcdh7A0A0A6YY83 Tmprss5-204ENSMUST00000167095 1146 ntAPPRIS ALT2 TSL 5 BASIC15.59■□□□□ 0.09
Pcdh7A0A0A6YY83 4930519L02Rik-201ENSMUST00000197683 619 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
Pcdh7A0A0A6YY83 Gm2270-201ENSMUST00000222858 797 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
Pcdh7A0A0A6YY83 Mrpl34-201ENSMUST00000048914 607 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Pcdh7A0A0A6YY83 Ttc16-202ENSMUST00000091059 2388 ntAPPRIS ALT2 TSL 1 (best) BASIC15.59■□□□□ 0.09
Pcdh7A0A0A6YY83 Pqlc1-203ENSMUST00000123750 2004 ntAPPRIS ALT2 TSL 1 (best) BASIC15.59■□□□□ 0.09
Pcdh7A0A0A6YY83 Ada-201ENSMUST00000017841 1688 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Pcdh7A0A0A6YY83 Prtg-201ENSMUST00000055535 9148 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Pcdh7A0A0A6YY83 Med16-201ENSMUST00000105378 3197 ntAPPRIS ALT2 TSL 1 (best) BASIC15.59■□□□□ 0.09
Pcdh7A0A0A6YY83 Pias2-201ENSMUST00000114776 2089 ntAPPRIS ALT2 TSL 1 (best) BASIC15.59■□□□□ 0.09
Pcdh7A0A0A6YY83 Alk-201ENSMUST00000086639 4866 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Pcdh7A0A0A6YY83 Tvp23b-201ENSMUST00000014321 1784 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Pcdh7A0A0A6YY83 Pcdha2-201ENSMUST00000115662 5361 ntAPPRIS P2 TSL 1 (best) BASIC15.59■□□□□ 0.09
Pcdh7A0A0A6YY83 Rnf138-202ENSMUST00000072847 3002 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
Pcdh7A0A0A6YY83 Lmbr1-204ENSMUST00000198105 2274 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
Pcdh7A0A0A6YY83 B230217C12Rik-203ENSMUST00000164364 1859 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
Pcdh7A0A0A6YY83 Slc7a15-204ENSMUST00000165657 1467 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
Pcdh7A0A0A6YY83 Slc7a15-202ENSMUST00000095863 1467 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Pcdh7A0A0A6YY83 Prrx1-202ENSMUST00000075805 4986 ntTSL 1 (best) BASIC15.58■□□□□ 0.09
Pcdh7A0A0A6YY83 Shroom1-204ENSMUST00000109013 3312 ntAPPRIS P3 TSL 1 (best) BASIC15.58■□□□□ 0.09
Pcdh7A0A0A6YY83 Sorbs1-213ENSMUST00000225153 3589 ntAPPRIS P4 BASIC15.58■□□□□ 0.08
Pcdh7A0A0A6YY83 Zfp384-208ENSMUST00000112428 3132 ntTSL 1 (best) BASIC15.58■□□□□ 0.08
Pcdh7A0A0A6YY83 Arl6ip1-201ENSMUST00000032888 2171 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
Pcdh7A0A0A6YY83 Islr2-202ENSMUST00000163200 4123 ntAPPRIS ALT2 TSL 1 (best) BASIC15.58■□□□□ 0.08
Pcdh7A0A0A6YY83 Naa15-201ENSMUST00000029303 6090 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
Pcdh7A0A0A6YY83 2210011K15Rik-201ENSMUST00000190690 1741 ntTSL 1 (best) BASIC15.58■□□□□ 0.08
Pcdh7A0A0A6YY83 Ptpn6-202ENSMUST00000112484 2219 ntAPPRIS P3 TSL 1 (best) BASIC15.58■□□□□ 0.08
Pcdh7A0A0A6YY83 Psmd4-203ENSMUST00000117355 1756 ntAPPRIS ALT2 TSL 1 (best) BASIC15.58■□□□□ 0.08
Pcdh7A0A0A6YY83 Rpl13-ps5-201ENSMUST00000117813 630 ntBASIC15.58■□□□□ 0.08
Pcdh7A0A0A6YY83 Gemin7-204ENSMUST00000122055 609 ntAPPRIS P1 TSL 3 BASIC15.58■□□□□ 0.08
Pcdh7A0A0A6YY83 Gm16160-201ENSMUST00000160105 781 ntTSL 2 BASIC15.58■□□□□ 0.08
Pcdh7A0A0A6YY83 Prr3-202ENSMUST00000165613 767 ntTSL 1 (best) BASIC15.58■□□□□ 0.08
Retrieved 100 of 76,532 protein–RNA pairs in 39.3 ms