Protein–RNA interactions for Protein: A0A075B699

Trav9d-1, T cell receptor alpha variable 9D-1 (Fragment), mousemouse

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav9d-1A0A075B699 Rest-202ENSMUST00000113449 6924 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Trav9d-1A0A075B699 AI849053-201ENSMUST00000181021 2658 ntTSL 3 BASIC11.74□□□□□ -0.53
Trav9d-1A0A075B699 Cadm2-203ENSMUST00000120898 2768 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
Trav9d-1A0A075B699 Nsun7-203ENSMUST00000201100 2775 ntAPPRIS P3 TSL 5 BASIC11.74□□□□□ -0.53
Trav9d-1A0A075B699 Sphk1-204ENSMUST00000106386 1879 ntAPPRIS ALT2 TSL 1 (best) BASIC11.74□□□□□ -0.53
Trav9d-1A0A075B699 Hoxb5-201ENSMUST00000049272 1895 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Trav9d-1A0A075B699 Lipo3-202ENSMUST00000112508 2839 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Trav9d-1A0A075B699 Card9-202ENSMUST00000100303 1947 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Trav9d-1A0A075B699 Prnd-202ENSMUST00000110170 1969 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Trav9d-1A0A075B699 Ddc-210ENSMUST00000178704 2018 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Trav9d-1A0A075B699 Grk5-201ENSMUST00000003313 3165 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Trav9d-1A0A075B699 Naa10-206ENSMUST00000114391 834 ntTSL 5 BASIC11.74□□□□□ -0.53
Trav9d-1A0A075B699 Ramp2-204ENSMUST00000129680 1178 ntAPPRIS P2 TSL 1 (best) BASIC11.74□□□□□ -0.53
Trav9d-1A0A075B699 4930401G09Rik-201ENSMUST00000139500 637 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
Trav9d-1A0A075B699 Jagn1-202ENSMUST00000204254 1147 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
Trav9d-1A0A075B699 Il3ra-205ENSMUST00000224877 1128 ntAPPRIS ALT2 BASIC11.74□□□□□ -0.53
Trav9d-1A0A075B699 Hacd1-201ENSMUST00000074854 926 ntAPPRIS P1 TSL 5 BASIC11.74□□□□□ -0.53
Trav9d-1A0A075B699 Hlcs-205ENSMUST00000227141 4021 ntAPPRIS ALT2 BASIC11.74□□□□□ -0.53
Trav9d-1A0A075B699 Glis1-202ENSMUST00000106738 2744 ntAPPRIS ALT2 TSL 5 BASIC11.74□□□□□ -0.53
Trav9d-1A0A075B699 Fam208b-201ENSMUST00000096069 8338 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Trav9d-1A0A075B699 Tdrd6-203ENSMUST00000168073 7062 ntAPPRIS ALT2 TSL 1 (best) BASIC11.74□□□□□ -0.53
Trav9d-1A0A075B699 Ftsj1-202ENSMUST00000115594 1529 ntTSL 5 BASIC11.74□□□□□ -0.53
Trav9d-1A0A075B699 Cyp2w1-201ENSMUST00000031521 1512 ntAPPRIS P1 TSL 5 BASIC11.74□□□□□ -0.53
Trav9d-1A0A075B699 Bcan-201ENSMUST00000090971 3141 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Trav9d-1A0A075B699 Smpd4-221ENSMUST00000170996 1619 ntTSL 5 BASIC11.74□□□□□ -0.53
Trav9d-1A0A075B699 Susd6-201ENSMUST00000068519 4977 ntAPPRIS P2 TSL 1 (best) BASIC11.74□□□□□ -0.53
Trav9d-1A0A075B699 Fgd1-201ENSMUST00000026296 4001 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Trav9d-1A0A075B699 Cyp2a5-201ENSMUST00000005685 2013 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Trav9d-1A0A075B699 Plk1-201ENSMUST00000033154 2199 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Trav9d-1A0A075B699 Zfp385a-201ENSMUST00000168828 2291 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Trav9d-1A0A075B699 Nde1-201ENSMUST00000023359 2287 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Trav9d-1A0A075B699 Hnrnpr-202ENSMUST00000105850 2683 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Trav9d-1A0A075B699 Spock1-203ENSMUST00000185905 2794 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
Trav9d-1A0A075B699 Epb41l1-202ENSMUST00000103135 6177 ntAPPRIS P1 TSL 5 BASIC11.73□□□□□ -0.53
Trav9d-1A0A075B699 Rnf138-201ENSMUST00000052396 3110 ntAPPRIS P1 TSL 5 BASIC11.73□□□□□ -0.53
Trav9d-1A0A075B699 Cbfa2t3-201ENSMUST00000006525 3161 ntAPPRIS ALT2 TSL 2 BASIC11.73□□□□□ -0.53
Trav9d-1A0A075B699 Nacc2-201ENSMUST00000028300 6378 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Trav9d-1A0A075B699 Wnt11-201ENSMUST00000067495 3451 ntAPPRIS P1 TSL 5 BASIC11.73□□□□□ -0.53
Trav9d-1A0A075B699 Fbxo21-201ENSMUST00000035579 3883 ntAPPRIS ALT2 TSL 1 (best) BASIC11.73□□□□□ -0.53
Trav9d-1A0A075B699 Epha2-201ENSMUST00000006614 3913 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Trav9d-1A0A075B699 Zfp606-201ENSMUST00000098822 4748 ntAPPRIS P3 TSL 1 (best) BASIC11.73□□□□□ -0.53
Trav9d-1A0A075B699 Tom1l2-205ENSMUST00000102682 2256 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
Trav9d-1A0A075B699 Gm12355-201ENSMUST00000104933 1311 ntAPPRIS P1 BASIC11.73□□□□□ -0.53
Trav9d-1A0A075B699 Thap3-202ENSMUST00000105665 832 ntAPPRIS ALT2 TSL 1 (best) BASIC11.73□□□□□ -0.53
Trav9d-1A0A075B699 Tbc1d2-202ENSMUST00000107750 1941 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
Trav9d-1A0A075B699 Ints8-203ENSMUST00000108319 3220 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Trav9d-1A0A075B699 Dguok-202ENSMUST00000113888 1007 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
Trav9d-1A0A075B699 Chchd2-ps-201ENSMUST00000117487 462 ntBASIC11.73□□□□□ -0.53
Trav9d-1A0A075B699 Ndufa5-202ENSMUST00000118558 315 ntTSL 2 BASIC11.73□□□□□ -0.53
Trav9d-1A0A075B699 D3Ertd751e-205ENSMUST00000120167 773 ntAPPRIS ALT2 TSL 5 BASIC11.73□□□□□ -0.53
Trav9d-1A0A075B699 Cul4a-202ENSMUST00000121426 1044 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
Trav9d-1A0A075B699 Oaz2-204ENSMUST00000136166 700 ntTSL 5 BASIC11.73□□□□□ -0.53
Trav9d-1A0A075B699 Dguok-201ENSMUST00000014698 1107 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Trav9d-1A0A075B699 Tppp3-201ENSMUST00000014990 1127 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Trav9d-1A0A075B699 Tsfm-207ENSMUST00000152054 655 ntTSL 3 BASIC11.73□□□□□ -0.53
Trav9d-1A0A075B699 Parg-202ENSMUST00000163350 3374 ntAPPRIS ALT2 TSL 1 (best) BASIC11.73□□□□□ -0.53
Trav9d-1A0A075B699 Gm20478-201ENSMUST00000173648 1031 ntTSL 3 BASIC11.73□□□□□ -0.53
Trav9d-1A0A075B699 Dnmt3a-ps1-201ENSMUST00000192011 1271 ntBASIC11.73□□□□□ -0.53
Trav9d-1A0A075B699 Sigirr-206ENSMUST00000210167 1897 ntAPPRIS ALT2 TSL 1 (best) BASIC11.73□□□□□ -0.53
Trav9d-1A0A075B699 Gm19164-201ENSMUST00000210667 640 ntBASIC11.73□□□□□ -0.53
Trav9d-1A0A075B699 Gm35154-202ENSMUST00000217008 1093 ntTSL 5 BASIC11.73□□□□□ -0.53
Trav9d-1A0A075B699 Gm18622-201ENSMUST00000219361 595 ntBASIC11.73□□□□□ -0.53
Trav9d-1A0A075B699 AC171004.1-201ENSMUST00000221723 664 ntTSL 3 BASIC11.73□□□□□ -0.53
Trav9d-1A0A075B699 AC160980.1-201ENSMUST00000224136 970 ntBASIC11.73□□□□□ -0.53
Trav9d-1A0A075B699 Psmg3-201ENSMUST00000031531 883 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Trav9d-1A0A075B699 Synrg-201ENSMUST00000049714 3995 ntAPPRIS ALT2 TSL 5 BASIC11.73□□□□□ -0.53
Trav9d-1A0A075B699 Zfp444-201ENSMUST00000054680 2467 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Trav9d-1A0A075B699 Gm10518-201ENSMUST00000097454 1301 ntAPPRIS P1 BASIC11.73□□□□□ -0.53
Trav9d-1A0A075B699 Srrm3-204ENSMUST00000144211 3932 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Trav9d-1A0A075B699 Rnf44-201ENSMUST00000037422 3734 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
Trav9d-1A0A075B699 Fgfr1op-202ENSMUST00000097419 3505 ntAPPRIS ALT2 TSL 1 (best) BASIC11.73□□□□□ -0.53
Trav9d-1A0A075B699 Gm16796-201ENSMUST00000126086 3172 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
Trav9d-1A0A075B699 Tmem185b-202ENSMUST00000183952 2824 ntAPPRIS P1 BASIC11.73□□□□□ -0.53
Trav9d-1A0A075B699 Nup62-205ENSMUST00000208626 2708 ntAPPRIS P1 TSL 5 BASIC11.73□□□□□ -0.53
Trav9d-1A0A075B699 Nup62-201ENSMUST00000057195 2722 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Trav9d-1A0A075B699 Smyd5-201ENSMUST00000045693 2486 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Trav9d-1A0A075B699 Doc2b-201ENSMUST00000021209 4361 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Trav9d-1A0A075B699 Lrrc57-202ENSMUST00000102497 1962 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Trav9d-1A0A075B699 Gmpr2-201ENSMUST00000002397 1993 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Trav9d-1A0A075B699 Gfm2-211ENSMUST00000161913 1829 ntTSL 2 BASIC11.72□□□□□ -0.53
Trav9d-1A0A075B699 Luc7l3-201ENSMUST00000021226 3373 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
Trav9d-1A0A075B699 CT010456.1-201ENSMUST00000222465 1688 ntTSL 5 BASIC11.72□□□□□ -0.53
Trav9d-1A0A075B699 Cand2-201ENSMUST00000075995 5474 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Trav9d-1A0A075B699 Nit1-202ENSMUST00000111295 1335 ntAPPRIS P3 TSL 1 (best) BASIC11.72□□□□□ -0.53
Trav9d-1A0A075B699 Slc33a1-203ENSMUST00000161659 2554 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Trav9d-1A0A075B699 Gm4459-201ENSMUST00000118750 468 ntBASIC11.72□□□□□ -0.53
Trav9d-1A0A075B699 Mpst-202ENSMUST00000167140 1279 ntAPPRIS P1 TSL 5 BASIC11.72□□□□□ -0.53
Trav9d-1A0A075B699 Cmtm5-203ENSMUST00000227441 610 ntBASIC11.72□□□□□ -0.53
Trav9d-1A0A075B699 Mrps6-201ENSMUST00000047429 846 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Trav9d-1A0A075B699 Tbc1d22b-201ENSMUST00000048677 3592 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Trav9d-1A0A075B699 Tpbg-202ENSMUST00000098500 3481 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Trav9d-1A0A075B699 Ltv1-201ENSMUST00000019950 2297 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Trav9d-1A0A075B699 Tns1-222ENSMUST00000212888 5643 ntAPPRIS ALT2 TSL 5 BASIC11.72□□□□□ -0.53
Trav9d-1A0A075B699 Brd2-203ENSMUST00000114242 4483 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Trav9d-1A0A075B699 Gm16565-201ENSMUST00000159138 2181 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
Trav9d-1A0A075B699 Mast2-201ENSMUST00000003908 5445 ntAPPRIS ALT2 TSL 1 (best) BASIC11.72□□□□□ -0.53
Trav9d-1A0A075B699 Erbb2-201ENSMUST00000058295 5012 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Trav9d-1A0A075B699 Gm39027-201ENSMUST00000208560 2942 ntTSL 5 BASIC11.72□□□□□ -0.53
Trav9d-1A0A075B699 Rnps1-203ENSMUST00000163717 1920 ntAPPRIS P1 TSL 5 BASIC11.72□□□□□ -0.53
Trav9d-1A0A075B699 Irf7-201ENSMUST00000026571 1916 ntAPPRIS P3 TSL 1 (best) BASIC11.72□□□□□ -0.53
Retrieved 100 of 76,532 protein–RNA pairs in 24.6 ms