Protein–RNA interactions for Protein: A0A075B654

Trav3-4, T cell receptor alpha variable 3-4 (Fragment), mousemouse

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav3-4A0A075B654 Wwtr1-201ENSMUST00000029380 4697 ntAPPRIS P3 TSL 1 (best) BASIC10.26□□□□□ -0.77
Trav3-4A0A075B654 Gm15559-201ENSMUST00000132267 2260 ntTSL 1 (best) BASIC10.26□□□□□ -0.77
Trav3-4A0A075B654 F830212C03Rik-201ENSMUST00000191701 2285 ntBASIC10.26□□□□□ -0.77
Trav3-4A0A075B654 Fam3a-206ENSMUST00000114143 1899 ntAPPRIS P1 TSL 1 (best) BASIC10.26□□□□□ -0.77
Trav3-4A0A075B654 Dhodh-209ENSMUST00000143900 1455 ntTSL 5 BASIC10.26□□□□□ -0.77
Trav3-4A0A075B654 Mief1-201ENSMUST00000023048 5081 ntAPPRIS P1 TSL 1 (best) BASIC10.26□□□□□ -0.77
Trav3-4A0A075B654 Atp8a1-204ENSMUST00000113652 854 ntTSL 1 (best) BASIC10.26□□□□□ -0.77
Trav3-4A0A075B654 Gm15889-201ENSMUST00000159142 1083 ntTSL 3 BASIC10.26□□□□□ -0.77
Trav3-4A0A075B654 AC099934.2-201ENSMUST00000196389 70 ntBASIC10.26□□□□□ -0.77
Trav3-4A0A075B654 AC156953.1-201ENSMUST00000196953 70 ntBASIC10.26□□□□□ -0.77
Trav3-4A0A075B654 AC157822.2-201ENSMUST00000200291 70 ntBASIC10.26□□□□□ -0.77
Trav3-4A0A075B654 Trappc6a-201ENSMUST00000002112 785 ntAPPRIS P1 TSL 1 (best) BASIC10.26□□□□□ -0.77
Trav3-4A0A075B654 Zfp36l1-204ENSMUST00000219642 545 ntTSL 3 BASIC10.26□□□□□ -0.77
Trav3-4A0A075B654 AL731706.1-201ENSMUST00000227806 944 ntAPPRIS ALT2 BASIC10.26□□□□□ -0.77
Trav3-4A0A075B654 4930412O13Rik-201ENSMUST00000026889 1187 ntAPPRIS P5 TSL 1 (best) BASIC10.26□□□□□ -0.77
Trav3-4A0A075B654 Faim-201ENSMUST00000035038 1019 ntAPPRIS P3 TSL 1 (best) BASIC10.26□□□□□ -0.77
Trav3-4A0A075B654 Brdt-201ENSMUST00000031215 4745 ntAPPRIS P1 TSL 1 (best) BASIC10.26□□□□□ -0.77
Trav3-4A0A075B654 Sra1-205ENSMUST00000173875 2360 ntAPPRIS ALT2 TSL 1 (best) BASIC10.26□□□□□ -0.77
Trav3-4A0A075B654 Vps35-201ENSMUST00000034131 3474 ntAPPRIS P1 TSL 1 (best) BASIC10.26□□□□□ -0.77
Trav3-4A0A075B654 Ptprr-204ENSMUST00000128399 2173 ntAPPRIS ALT2 TSL 1 (best) BASIC10.26□□□□□ -0.77
Trav3-4A0A075B654 Gm26752-201ENSMUST00000181086 1537 ntTSL 1 (best) BASIC10.26□□□□□ -0.77
Trav3-4A0A075B654 Col25a1-201ENSMUST00000080335 2624 ntAPPRIS P4 TSL 5 BASIC10.26□□□□□ -0.77
Trav3-4A0A075B654 Gm45638-201ENSMUST00000211507 2878 ntBASIC10.26□□□□□ -0.77
Trav3-4A0A075B654 Mbtd1-202ENSMUST00000063718 3785 ntTSL 1 (best) BASIC10.26□□□□□ -0.77
Trav3-4A0A075B654 Akna-201ENSMUST00000035724 5387 ntAPPRIS P1 TSL 5 BASIC10.26□□□□□ -0.77
Trav3-4A0A075B654 Adck2-201ENSMUST00000051249 2287 ntTSL 5 BASIC10.26□□□□□ -0.77
Trav3-4A0A075B654 Col8a2-201ENSMUST00000070132 4332 ntAPPRIS P1 TSL 1 (best) BASIC10.26□□□□□ -0.77
Trav3-4A0A075B654 Gm15998-201ENSMUST00000135144 1844 ntTSL 1 (best) BASIC10.26□□□□□ -0.77
Trav3-4A0A075B654 Commd7-201ENSMUST00000071852 3210 ntAPPRIS P1 TSL 1 (best) BASIC10.26□□□□□ -0.77
Trav3-4A0A075B654 Apbb1-205ENSMUST00000187057 1630 ntTSL 5 BASIC10.25□□□□□ -0.77
Trav3-4A0A075B654 Gm6093-201ENSMUST00000221792 1623 ntTSL 1 (best) BASIC10.25□□□□□ -0.77
Trav3-4A0A075B654 Naa40-201ENSMUST00000025675 3275 ntAPPRIS P1 TSL 1 (best) BASIC10.25□□□□□ -0.77
Trav3-4A0A075B654 Sh2b2-201ENSMUST00000005188 2848 ntAPPRIS P1 TSL 1 (best) BASIC10.25□□□□□ -0.77
Trav3-4A0A075B654 Ahdc1-201ENSMUST00000044521 6105 ntAPPRIS P1 TSL 1 (best) BASIC10.25□□□□□ -0.77
Trav3-4A0A075B654 Mrap2-202ENSMUST00000113149 2112 ntAPPRIS P1 TSL 5 BASIC10.25□□□□□ -0.77
Trav3-4A0A075B654 Wwox-202ENSMUST00000109107 2383 ntTSL 1 (best) BASIC10.25□□□□□ -0.77
Trav3-4A0A075B654 Chaf1b-201ENSMUST00000023666 1922 ntAPPRIS P1 TSL 1 (best) BASIC10.25□□□□□ -0.77
Trav3-4A0A075B654 Llgl2-212ENSMUST00000177736 3612 ntAPPRIS ALT2 TSL 2 BASIC10.25□□□□□ -0.77
Trav3-4A0A075B654 Ap4b1-204ENSMUST00000106824 2412 ntTSL 5 BASIC10.25□□□□□ -0.77
Trav3-4A0A075B654 Nkx3-1-201ENSMUST00000022646 3195 ntAPPRIS P1 TSL 1 (best) BASIC10.25□□□□□ -0.77
Trav3-4A0A075B654 Ret-201ENSMUST00000032201 5456 ntAPPRIS P3 TSL 1 (best) BASIC10.25□□□□□ -0.77
Trav3-4A0A075B654 Gramd1b-201ENSMUST00000045682 7488 ntAPPRIS P2 TSL 1 (best) BASIC10.25□□□□□ -0.77
Trav3-4A0A075B654 Fgfr1-202ENSMUST00000117179 4046 ntAPPRIS ALT1 TSL 1 (best) BASIC10.25□□□□□ -0.77
Trav3-4A0A075B654 Pxk-205ENSMUST00000225653 2765 ntAPPRIS P2 BASIC10.25□□□□□ -0.77
Trav3-4A0A075B654 Mcrs1-202ENSMUST00000163506 1795 ntTSL 1 (best) BASIC10.25□□□□□ -0.77
Trav3-4A0A075B654 Irf7-202ENSMUST00000097952 1764 ntAPPRIS ALT2 TSL 1 (best) BASIC10.25□□□□□ -0.77
Trav3-4A0A075B654 Gpd1-203ENSMUST00000162194 1515 ntTSL 5 BASIC10.25□□□□□ -0.77
Trav3-4A0A075B654 Gm12134-201ENSMUST00000122109 520 ntBASIC10.25□□□□□ -0.77
Trav3-4A0A075B654 Pigx-210ENSMUST00000155966 963 ntAPPRIS ALT2 TSL 2 BASIC10.25□□□□□ -0.77
Trav3-4A0A075B654 Sox8-202ENSMUST00000173447 928 ntAPPRIS ALT2 TSL 1 (best) BASIC10.25□□□□□ -0.77
Trav3-4A0A075B654 Gm26524-201ENSMUST00000192339 390 ntBASIC10.25□□□□□ -0.77
Trav3-4A0A075B654 Gm4968-201ENSMUST00000071458 858 ntBASIC10.25□□□□□ -0.77
Trav3-4A0A075B654 Sgsm1-201ENSMUST00000048112 5161 ntAPPRIS P1 TSL 1 (best) BASIC10.25□□□□□ -0.77
Trav3-4A0A075B654 9530059O14Rik-202ENSMUST00000181682 2093 ntTSL 1 (best) BASIC10.25□□□□□ -0.77
Trav3-4A0A075B654 Hyou1-204ENSMUST00000160902 3374 ntAPPRIS P1 TSL 5 BASIC10.25□□□□□ -0.77
Trav3-4A0A075B654 Tgfb1i1-205ENSMUST00000165667 1812 ntTSL 1 (best) BASIC10.25□□□□□ -0.77
Trav3-4A0A075B654 Jade1-204ENSMUST00000170711 2896 ntTSL 5 BASIC10.25□□□□□ -0.77
Trav3-4A0A075B654 Arid3c-202ENSMUST00000150809 1327 ntAPPRIS ALT2 TSL 1 (best) BASIC10.25□□□□□ -0.77
Trav3-4A0A075B654 Grin2c-201ENSMUST00000003351 4279 ntAPPRIS P1 TSL 5 BASIC10.25□□□□□ -0.77
Trav3-4A0A075B654 Bap1-201ENSMUST00000022458 3460 ntAPPRIS P1 TSL 1 (best) BASIC10.25□□□□□ -0.77
Trav3-4A0A075B654 Bahcc1-202ENSMUST00000118987 10712 ntAPPRIS ALT2 TSL 1 (best) BASIC10.25□□□□□ -0.77
Trav3-4A0A075B654 Gm12500-202ENSMUST00000186471 2428 ntBASIC10.25□□□□□ -0.77
Trav3-4A0A075B654 Cd151-201ENSMUST00000058746 1619 ntAPPRIS P1 TSL 1 (best) BASIC10.25□□□□□ -0.77
Trav3-4A0A075B654 Gm5357-201ENSMUST00000212720 1924 ntBASIC10.25□□□□□ -0.77
Trav3-4A0A075B654 Gm6190-201ENSMUST00000220683 1374 ntBASIC10.25□□□□□ -0.77
Trav3-4A0A075B654 Sgta-201ENSMUST00000005067 1969 ntAPPRIS P2 TSL 1 (best) BASIC10.25□□□□□ -0.77
Trav3-4A0A075B654 Usp24-204ENSMUST00000165709 10594 ntAPPRIS ALT2 TSL 5 BASIC10.24□□□□□ -0.77
Trav3-4A0A075B654 Cep19-202ENSMUST00000115168 1718 ntAPPRIS P1 TSL 1 (best) BASIC10.24□□□□□ -0.77
Trav3-4A0A075B654 Gm37861-201ENSMUST00000193534 2869 ntBASIC10.24□□□□□ -0.77
Trav3-4A0A075B654 Cnot10-206ENSMUST00000216785 1723 ntTSL 5 BASIC10.24□□□□□ -0.77
Trav3-4A0A075B654 Atg7-215ENSMUST00000183165 2012 ntTSL 5 BASIC10.24□□□□□ -0.77
Trav3-4A0A075B654 Rnf13-205ENSMUST00000198214 2027 ntTSL 1 (best) BASIC10.24□□□□□ -0.77
Trav3-4A0A075B654 Arhgap33-207ENSMUST00000208538 4372 ntAPPRIS P3 TSL 1 (best) BASIC10.24□□□□□ -0.77
Trav3-4A0A075B654 Tceanc2-202ENSMUST00000057043 6431 ntAPPRIS P1 TSL 1 (best) BASIC10.24□□□□□ -0.77
Trav3-4A0A075B654 Fip1l1-201ENSMUST00000080164 4673 ntAPPRIS P3 TSL 1 (best) BASIC10.24□□□□□ -0.77
Trav3-4A0A075B654 Lamc3-201ENSMUST00000028187 5871 ntAPPRIS P1 TSL 1 (best) BASIC10.24□□□□□ -0.77
Trav3-4A0A075B654 Psmd4-203ENSMUST00000117355 1756 ntAPPRIS ALT2 TSL 1 (best) BASIC10.24□□□□□ -0.77
Trav3-4A0A075B654 Slc25a20-201ENSMUST00000035222 1783 ntAPPRIS P1 TSL 1 (best) BASIC10.24□□□□□ -0.77
Trav3-4A0A075B654 Cnga3-203ENSMUST00000194195 2083 ntAPPRIS P3 TSL 5 BASIC10.24□□□□□ -0.77
Trav3-4A0A075B654 Atp2a3-203ENSMUST00000108485 4520 ntAPPRIS ALT2 TSL 1 (best) BASIC10.24□□□□□ -0.77
Trav3-4A0A075B654 Atp2a3-204ENSMUST00000108486 4540 ntAPPRIS ALT2 TSL 5 BASIC10.24□□□□□ -0.77
Trav3-4A0A075B654 Efs-201ENSMUST00000022813 2705 ntAPPRIS P1 TSL 1 (best) BASIC10.24□□□□□ -0.77
Trav3-4A0A075B654 Gm3045-201ENSMUST00000212844 1825 ntAPPRIS P1 TSL 5 BASIC10.24□□□□□ -0.77
Trav3-4A0A075B654 Fam46a-201ENSMUST00000034802 5479 ntAPPRIS P3 TSL 3 BASIC10.24□□□□□ -0.77
Trav3-4A0A075B654 Epha5-204ENSMUST00000113401 5158 ntTSL 1 (best) BASIC10.24□□□□□ -0.77
Trav3-4A0A075B654 Ggnbp1-201ENSMUST00000053683 1525 ntAPPRIS P3 TSL 1 (best) BASIC10.24□□□□□ -0.77
Trav3-4A0A075B654 Twistnb-201ENSMUST00000020877 4325 ntAPPRIS P1 TSL 1 (best) BASIC10.24□□□□□ -0.77
Trav3-4A0A075B654 Dym-201ENSMUST00000039608 2471 ntAPPRIS P1 TSL 1 (best) BASIC10.24□□□□□ -0.77
Trav3-4A0A075B654 Smyd5-201ENSMUST00000045693 2486 ntAPPRIS P1 TSL 1 (best) BASIC10.24□□□□□ -0.77
Trav3-4A0A075B654 Ncln-202ENSMUST00000118498 2841 ntAPPRIS ALT1 TSL 5 BASIC10.24□□□□□ -0.77
Trav3-4A0A075B654 Enc1-201ENSMUST00000041623 4737 ntAPPRIS P1 TSL 1 (best) BASIC10.24□□□□□ -0.77
Trav3-4A0A075B654 Crtc1-201ENSMUST00000076615 5683 ntAPPRIS P1 TSL 1 (best) BASIC10.24□□□□□ -0.77
Trav3-4A0A075B654 Traf7-210ENSMUST00000176353 2503 ntTSL 1 (best) BASIC10.24□□□□□ -0.77
Trav3-4A0A075B654 Gm12382-201ENSMUST00000122005 922 ntBASIC10.24□□□□□ -0.77
Trav3-4A0A075B654 Alkbh1-212ENSMUST00000185301 408 ntBASIC10.24□□□□□ -0.77
Trav3-4A0A075B654 Specc1-215ENSMUST00000202744 674 ntTSL 3 BASIC10.24□□□□□ -0.77
Trav3-4A0A075B654 Gm18671-201ENSMUST00000214826 683 ntBASIC10.24□□□□□ -0.77
Trav3-4A0A075B654 Slc4a2-201ENSMUST00000080067 4179 ntAPPRIS P2 TSL 1 (best) BASIC10.24□□□□□ -0.77
Trav3-4A0A075B654 B3gnt7-201ENSMUST00000113306 2582 ntAPPRIS P1 TSL 1 (best) BASIC10.24□□□□□ -0.77
Trav3-4A0A075B654 Dhtkd1-202ENSMUST00000095147 5480 ntAPPRIS P1 TSL 5 BASIC10.24□□□□□ -0.77
Retrieved 100 of 76,532 protein–RNA pairs in 25.9 ms