Protein–RNA interactions for Protein: A0A075B633

Trav8n-2, T cell receptor alpha variable 8n-2 (Fragment), mousemouse

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav8n-2A0A075B633 Fam172a-203ENSMUST00000163257 1436 ntAPPRIS P4 TSL 5 BASIC13.87□□□□□ -0.19
Trav8n-2A0A075B633 Nt5dc2-201ENSMUST00000090212 1407 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
Trav8n-2A0A075B633 Shisa2-201ENSMUST00000053949 3119 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Trav8n-2A0A075B633 Rbpms2-202ENSMUST00000169003 1803 ntAPPRIS ALT2 TSL 1 (best) BASIC13.87□□□□□ -0.19
Trav8n-2A0A075B633 Kank3-201ENSMUST00000048560 2641 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Trav8n-2A0A075B633 Acbd5-206ENSMUST00000155602 1714 ntAPPRIS ALT2 TSL 2 BASIC13.87□□□□□ -0.19
Trav8n-2A0A075B633 Pitpnm1-202ENSMUST00000100022 4512 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Trav8n-2A0A075B633 Lamc1-201ENSMUST00000027752 7622 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Trav8n-2A0A075B633 Dok7-202ENSMUST00000101298 2443 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
Trav8n-2A0A075B633 Ormdl3-201ENSMUST00000052919 2184 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Trav8n-2A0A075B633 Max-202ENSMUST00000110395 1942 ntAPPRIS P3 TSL 1 (best) BASIC13.86□□□□□ -0.19
Trav8n-2A0A075B633 Mapk9-201ENSMUST00000020634 4675 ntAPPRIS P3 TSL 1 (best) BASIC13.86□□□□□ -0.19
Trav8n-2A0A075B633 Adam33-201ENSMUST00000052104 2795 ntAPPRIS ALT2 TSL 1 (best) BASIC13.86□□□□□ -0.19
Trav8n-2A0A075B633 Rbfox2-209ENSMUST00000228087 1694 ntAPPRIS ALT2 BASIC13.86□□□□□ -0.19
Trav8n-2A0A075B633 Fgf15-201ENSMUST00000033389 1810 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Trav8n-2A0A075B633 Ppdpf-202ENSMUST00000108841 689 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Trav8n-2A0A075B633 Pfdn6-204ENSMUST00000174048 560 ntAPPRIS P1 TSL 2 BASIC13.86□□□□□ -0.19
Trav8n-2A0A075B633 Gm6888-201ENSMUST00000221983 706 ntBASIC13.86□□□□□ -0.19
Trav8n-2A0A075B633 4930408O17Rik-202ENSMUST00000222624 1131 ntTSL 5 BASIC13.86□□□□□ -0.19
Trav8n-2A0A075B633 Aif1-201ENSMUST00000025257 847 ntAPPRIS P1 TSL 2 BASIC13.86□□□□□ -0.19
Trav8n-2A0A075B633 Rab33a-201ENSMUST00000033430 1158 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Trav8n-2A0A075B633 Rhbdl2-201ENSMUST00000053202 1217 ntAPPRIS P1 TSL 5 BASIC13.86□□□□□ -0.19
Trav8n-2A0A075B633 Med8-202ENSMUST00000073881 1052 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
Trav8n-2A0A075B633 2900055J20Rik-201ENSMUST00000096572 723 ntAPPRIS P1 BASIC13.86□□□□□ -0.19
Trav8n-2A0A075B633 6430548M08Rik-201ENSMUST00000034281 5564 ntAPPRIS P3 TSL 1 (best) BASIC13.86□□□□□ -0.19
Trav8n-2A0A075B633 Hook2-201ENSMUST00000064495 2580 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Trav8n-2A0A075B633 Wscd2-201ENSMUST00000094452 4302 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Trav8n-2A0A075B633 Taok3-202ENSMUST00000111975 2172 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
Trav8n-2A0A075B633 Krt73-201ENSMUST00000063292 2165 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Trav8n-2A0A075B633 Rccd1-202ENSMUST00000121882 2324 ntAPPRIS P1 TSL 5 BASIC13.86□□□□□ -0.19
Trav8n-2A0A075B633 Col13a1-204ENSMUST00000105453 2935 ntTSL 2 BASIC13.86□□□□□ -0.19
Trav8n-2A0A075B633 Kctd6-202ENSMUST00000170111 3052 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Trav8n-2A0A075B633 Gpc3-201ENSMUST00000069360 2216 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Trav8n-2A0A075B633 Hspa8-201ENSMUST00000015800 2394 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Trav8n-2A0A075B633 Zfp800-202ENSMUST00000115320 4311 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Trav8n-2A0A075B633 Cul1-201ENSMUST00000031697 3161 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Trav8n-2A0A075B633 Eml2-203ENSMUST00000120595 2255 ntAPPRIS ALT2 TSL 1 (best) BASIC13.85□□□□□ -0.19
Trav8n-2A0A075B633 Pltp-201ENSMUST00000059954 1809 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Trav8n-2A0A075B633 Gm43072-201ENSMUST00000200283 1671 ntBASIC13.85□□□□□ -0.19
Trav8n-2A0A075B633 Ywhaq-201ENSMUST00000049531 1515 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Trav8n-2A0A075B633 Arfgap1-214ENSMUST00000185115 1393 ntAPPRIS ALT2 TSL 5 BASIC13.85□□□□□ -0.19
Trav8n-2A0A075B633 Rims3-201ENSMUST00000071093 6505 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Trav8n-2A0A075B633 Dgkz-201ENSMUST00000028667 3584 ntAPPRIS P2 TSL 1 (best) BASIC13.85□□□□□ -0.19
Trav8n-2A0A075B633 Gas6-201ENSMUST00000033828 2548 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Trav8n-2A0A075B633 Rps13-ps4-201ENSMUST00000117927 456 ntBASIC13.85□□□□□ -0.19
Trav8n-2A0A075B633 Rps13-ps5-201ENSMUST00000117939 456 ntBASIC13.85□□□□□ -0.19
Trav8n-2A0A075B633 Gm15483-201ENSMUST00000120338 456 ntBASIC13.85□□□□□ -0.19
Trav8n-2A0A075B633 Gm11424-201ENSMUST00000121929 829 ntBASIC13.85□□□□□ -0.19
Trav8n-2A0A075B633 Gm12264-201ENSMUST00000123949 500 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
Trav8n-2A0A075B633 Gm8116-201ENSMUST00000182917 1201 ntBASIC13.85□□□□□ -0.19
Trav8n-2A0A075B633 Prg3-201ENSMUST00000028466 949 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Trav8n-2A0A075B633 Vps25-202ENSMUST00000042477 1106 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Trav8n-2A0A075B633 Olfr324-201ENSMUST00000054683 1122 ntAPPRIS P2 BASIC13.85□□□□□ -0.19
Trav8n-2A0A075B633 Ifng-201ENSMUST00000068592 1208 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Trav8n-2A0A075B633 Gm14026-201ENSMUST00000120625 1789 ntBASIC13.85□□□□□ -0.19
Trav8n-2A0A075B633 Stap2-201ENSMUST00000043785 1491 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Trav8n-2A0A075B633 Vrk3-201ENSMUST00000002275 1969 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Trav8n-2A0A075B633 Ralgapa1-201ENSMUST00000085385 7901 ntAPPRIS P2 TSL 1 (best) BASIC13.85□□□□□ -0.19
Trav8n-2A0A075B633 Fam83f-201ENSMUST00000023044 2988 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Trav8n-2A0A075B633 Dusp13-202ENSMUST00000119866 1342 ntTSL 5 BASIC13.85□□□□□ -0.19
Trav8n-2A0A075B633 Sept6-203ENSMUST00000115239 1845 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
Trav8n-2A0A075B633 Nfib-204ENSMUST00000107246 3075 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
Trav8n-2A0A075B633 Kcnq2-201ENSMUST00000016491 3067 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
Trav8n-2A0A075B633 Kif21a-201ENSMUST00000067205 6307 ntAPPRIS ALT2 TSL 1 (best) BASIC13.84□□□□□ -0.19
Trav8n-2A0A075B633 Adam22-201ENSMUST00000046838 2773 ntAPPRIS P3 TSL 1 (best) BASIC13.84□□□□□ -0.19
Trav8n-2A0A075B633 Tle3-218ENSMUST00000178113 5205 ntTSL 5 BASIC13.84□□□□□ -0.19
Trav8n-2A0A075B633 Pde4d-207ENSMUST00000120664 4207 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
Trav8n-2A0A075B633 Psmd12-203ENSMUST00000106752 1955 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
Trav8n-2A0A075B633 Men1-204ENSMUST00000113500 2742 ntAPPRIS P2 TSL 5 BASIC13.84□□□□□ -0.19
Trav8n-2A0A075B633 Pou2f3-rs1-201ENSMUST00000120271 1046 ntBASIC13.84□□□□□ -0.19
Trav8n-2A0A075B633 Gm15593-201ENSMUST00000122085 1008 ntBASIC13.84□□□□□ -0.19
Trav8n-2A0A075B633 2310061I04Rik-204ENSMUST00000148721 1293 ntAPPRIS P1 TSL 5 BASIC13.84□□□□□ -0.19
Trav8n-2A0A075B633 Gm16163-201ENSMUST00000161868 1119 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
Trav8n-2A0A075B633 Pkig-209ENSMUST00000164399 983 ntAPPRIS P1 TSL 2 BASIC13.84□□□□□ -0.19
Trav8n-2A0A075B633 2410002F23Rik-214ENSMUST00000186606 748 ntAPPRIS ALT2 TSL 5 BASIC13.84□□□□□ -0.19
Trav8n-2A0A075B633 CT009510.1-201ENSMUST00000227972 270 ntBASIC13.84□□□□□ -0.19
Trav8n-2A0A075B633 Clec4g-202ENSMUST00000062037 1242 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Trav8n-2A0A075B633 Rhox9-201ENSMUST00000089062 882 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Trav8n-2A0A075B633 Gm10322-201ENSMUST00000095646 336 ntAPPRIS P1 BASIC13.84□□□□□ -0.19
Trav8n-2A0A075B633 Tcta-201ENSMUST00000044725 1668 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
Trav8n-2A0A075B633 Mfng-201ENSMUST00000018313 1865 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Trav8n-2A0A075B633 Cnppd1-208ENSMUST00000190679 2062 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Trav8n-2A0A075B633 Gldc-201ENSMUST00000025778 3754 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Trav8n-2A0A075B633 Tasp1-201ENSMUST00000046656 2480 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Trav8n-2A0A075B633 Rala-201ENSMUST00000009003 2688 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Trav8n-2A0A075B633 Smarca5-201ENSMUST00000043359 6113 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Trav8n-2A0A075B633 Kmt5b-202ENSMUST00000052699 3290 ntAPPRIS ALT2 TSL 5 BASIC13.84□□□□□ -0.19
Trav8n-2A0A075B633 Elavl3-201ENSMUST00000003501 5014 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Trav8n-2A0A075B633 Zfp764-201ENSMUST00000059199 2508 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Trav8n-2A0A075B633 Ntng2-204ENSMUST00000102873 1593 ntAPPRIS ALT2 TSL 1 (best) BASIC13.83□□□□□ -0.19
Trav8n-2A0A075B633 Slc22a18-202ENSMUST00000105917 1552 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.19
Trav8n-2A0A075B633 Nkpd1-201ENSMUST00000078908 2753 ntAPPRIS P2 TSL 1 (best) BASIC13.83□□□□□ -0.19
Trav8n-2A0A075B633 Tal1-201ENSMUST00000030489 4213 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.19
Trav8n-2A0A075B633 Gm17055-201ENSMUST00000166951 2232 ntTSL 5 BASIC13.83□□□□□ -0.2
Trav8n-2A0A075B633 Gm13613-201ENSMUST00000126240 1444 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
Trav8n-2A0A075B633 Shd-202ENSMUST00000223629 1430 ntAPPRIS P2 BASIC13.83□□□□□ -0.2
Trav8n-2A0A075B633 Ubr3-201ENSMUST00000055758 8072 ntAPPRIS P2 TSL 1 (best) BASIC13.83□□□□□ -0.2
Trav8n-2A0A075B633 Jade1-203ENSMUST00000168086 4790 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
Trav8n-2A0A075B633 Catip-204ENSMUST00000191010 1866 ntAPPRIS ALT2 TSL 1 (best) BASIC13.83□□□□□ -0.2
Trav8n-2A0A075B633 Lhfpl3-202ENSMUST00000197992 3115 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Retrieved 100 of 76,532 protein–RNA pairs in 85.3 ms