Protein–RNA interactions for Protein: A0A075B5I2

Trbv4, T cell receptor beta, variable 10 (Fragment), mousemouse

Predictions only

Length 113 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trbv4A0A075B5I2 Dsn1-201ENSMUST00000103129 2080 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Trbv4A0A075B5I2 Samd4-211ENSMUST00000228404 3039 ntAPPRIS ALT2 BASIC15.22■□□□□ 0.03
Trbv4A0A075B5I2 Dlx4os-201ENSMUST00000156477 1664 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
Trbv4A0A075B5I2 Nfe2l2-201ENSMUST00000102672 2475 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Trbv4A0A075B5I2 Krt2-201ENSMUST00000023712 2613 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Trbv4A0A075B5I2 Rufy3-205ENSMUST00000198965 3536 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Trbv4A0A075B5I2 Zfp36l2-201ENSMUST00000060366 3530 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Trbv4A0A075B5I2 Rhox2h-201ENSMUST00000115162 779 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Trbv4A0A075B5I2 Gm29103-201ENSMUST00000191034 598 ntTSL 5 BASIC15.22■□□□□ 0.03
Trbv4A0A075B5I2 AC161829.1-201ENSMUST00000220298 281 ntBASIC15.22■□□□□ 0.03
Trbv4A0A075B5I2 Isg15-201ENSMUST00000085425 756 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Trbv4A0A075B5I2 Vps51-204ENSMUST00000159832 3048 ntAPPRIS P1 TSL 5 BASIC15.22■□□□□ 0.03
Trbv4A0A075B5I2 G630022F23Rik-201ENSMUST00000202923 3627 ntBASIC15.22■□□□□ 0.03
Trbv4A0A075B5I2 Gm38318-201ENSMUST00000195769 1706 ntBASIC15.22■□□□□ 0.03
Trbv4A0A075B5I2 Pde3b-201ENSMUST00000032909 6573 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Trbv4A0A075B5I2 Oas1a-201ENSMUST00000080322 1885 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Trbv4A0A075B5I2 Upf1-202ENSMUST00000215817 4518 ntAPPRIS ALT2 TSL 1 (best) BASIC15.22■□□□□ 0.03
Trbv4A0A075B5I2 Ddc-210ENSMUST00000178704 2018 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Trbv4A0A075B5I2 Znfx1-201ENSMUST00000048988 7218 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Trbv4A0A075B5I2 Plcl1-201ENSMUST00000042986 6580 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Trbv4A0A075B5I2 Tcf19-203ENSMUST00000161012 1665 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Trbv4A0A075B5I2 Kif1c-201ENSMUST00000072187 5046 ntAPPRIS ALT2 TSL 1 (best) BASIC15.22■□□□□ 0.03
Trbv4A0A075B5I2 Vrk3-201ENSMUST00000002275 1969 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Trbv4A0A075B5I2 Krt25-201ENSMUST00000038004 1989 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Trbv4A0A075B5I2 Zfp786-201ENSMUST00000058844 3191 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Trbv4A0A075B5I2 Arvcf-205ENSMUST00000115614 4698 ntAPPRIS ALT2 TSL 1 (best) BASIC15.22■□□□□ 0.03
Trbv4A0A075B5I2 Col16a1-201ENSMUST00000044565 5206 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Trbv4A0A075B5I2 Tbc1d1-203ENSMUST00000119756 4760 ntAPPRIS ALT2 TSL 1 (best) BASIC15.21■□□□□ 0.03
Trbv4A0A075B5I2 Camk2g-217ENSMUST00000226630 1937 ntBASIC15.21■□□□□ 0.03
Trbv4A0A075B5I2 Ror1-201ENSMUST00000039630 5762 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Trbv4A0A075B5I2 Gm43195-201ENSMUST00000200614 2332 ntBASIC15.21■□□□□ 0.03
Trbv4A0A075B5I2 Arhgap11a-204ENSMUST00000110949 4458 ntAPPRIS P2 TSL 5 BASIC15.21■□□□□ 0.03
Trbv4A0A075B5I2 Dek-201ENSMUST00000021807 2556 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Trbv4A0A075B5I2 Cdk16-201ENSMUST00000033380 3120 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Trbv4A0A075B5I2 Acsl3-201ENSMUST00000035779 3950 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Trbv4A0A075B5I2 Il11ra2-201ENSMUST00000108006 1299 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Trbv4A0A075B5I2 Btn1a1-202ENSMUST00000110434 1077 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
Trbv4A0A075B5I2 Gm13884-201ENSMUST00000118103 829 ntBASIC15.21■□□□□ 0.03
Trbv4A0A075B5I2 Nat8b-ps-201ENSMUST00000162660 699 ntBASIC15.21■□□□□ 0.03
Trbv4A0A075B5I2 Lmbrd1-202ENSMUST00000186096 688 ntTSL 2 BASIC15.21■□□□□ 0.03
Trbv4A0A075B5I2 4930458A03Rik-201ENSMUST00000198197 961 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
Trbv4A0A075B5I2 Gm5864-201ENSMUST00000202263 970 ntBASIC15.21■□□□□ 0.03
Trbv4A0A075B5I2 Gm10060-201ENSMUST00000212002 111 ntBASIC15.21■□□□□ 0.03
Trbv4A0A075B5I2 Gm7787-201ENSMUST00000216858 688 ntBASIC15.21■□□□□ 0.03
Trbv4A0A075B5I2 Gnptg-201ENSMUST00000038973 1234 ntAPPRIS P2 TSL 1 (best) BASIC15.21■□□□□ 0.03
Trbv4A0A075B5I2 Kit-204ENSMUST00000144270 5241 ntAPPRIS ALT2 TSL 1 (best) BASIC15.21■□□□□ 0.03
Trbv4A0A075B5I2 Strn4-201ENSMUST00000019220 3535 ntAPPRIS P4 TSL 1 (best) BASIC15.21■□□□□ 0.03
Trbv4A0A075B5I2 Pcdha7-201ENSMUST00000192631 5337 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Trbv4A0A075B5I2 Cd82-202ENSMUST00000099696 1657 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Trbv4A0A075B5I2 Slc32a1-201ENSMUST00000045738 2797 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Trbv4A0A075B5I2 Zmym3-204ENSMUST00000118092 1502 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
Trbv4A0A075B5I2 Arhgef1-218ENSMUST00000206508 3195 ntAPPRIS ALT2 TSL 1 (best) BASIC15.21■□□□□ 0.03
Trbv4A0A075B5I2 Mdm1-202ENSMUST00000163238 2461 ntAPPRIS ALT2 TSL 1 (best) BASIC15.21■□□□□ 0.02
Trbv4A0A075B5I2 Tvp23b-201ENSMUST00000014321 1784 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.02
Trbv4A0A075B5I2 Fzd5-201ENSMUST00000063982 6915 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.02
Trbv4A0A075B5I2 Ube2j1-202ENSMUST00000124992 3530 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.02
Trbv4A0A075B5I2 Impdh1-207ENSMUST00000162099 2580 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.02
Trbv4A0A075B5I2 Rnaseh2a-203ENSMUST00000109738 2044 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.02
Trbv4A0A075B5I2 Lmna-203ENSMUST00000120377 2021 ntAPPRIS ALT2 TSL 1 (best) BASIC15.21■□□□□ 0.02
Trbv4A0A075B5I2 Zfp316-201ENSMUST00000051665 3054 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Trbv4A0A075B5I2 Coasy-201ENSMUST00000001806 2138 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Trbv4A0A075B5I2 Tmem255a-203ENSMUST00000089056 1745 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
Trbv4A0A075B5I2 Senp1-204ENSMUST00000180657 3806 ntAPPRIS ALT2 TSL 1 (best) BASIC15.2■□□□□ 0.02
Trbv4A0A075B5I2 Zfp444-201ENSMUST00000054680 2467 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Trbv4A0A075B5I2 Fam84b-201ENSMUST00000100635 5565 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Trbv4A0A075B5I2 D630044L22Rik-201ENSMUST00000181174 2964 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Trbv4A0A075B5I2 Zfx-204ENSMUST00000113927 6933 ntAPPRIS P1 TSL 5 BASIC15.2■□□□□ 0.02
Trbv4A0A075B5I2 Tsacc-202ENSMUST00000107556 584 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Trbv4A0A075B5I2 Nkain4-202ENSMUST00000108873 865 ntAPPRIS ALT2 TSL 1 (best) BASIC15.2■□□□□ 0.02
Trbv4A0A075B5I2 Timm9-202ENSMUST00000166120 990 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Trbv4A0A075B5I2 Fbxo17-205ENSMUST00000167118 861 ntAPPRIS P1 TSL 5 BASIC15.2■□□□□ 0.02
Trbv4A0A075B5I2 Urah-204ENSMUST00000185612 716 ntAPPRIS P3 TSL 3 BASIC15.2■□□□□ 0.02
Trbv4A0A075B5I2 Urah-207ENSMUST00000211372 688 ntAPPRIS P3 TSL 2 BASIC15.2■□□□□ 0.02
Trbv4A0A075B5I2 Id4-201ENSMUST00000021810 3849 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Trbv4A0A075B5I2 Timm9-207ENSMUST00000221559 718 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Trbv4A0A075B5I2 Timm9-209ENSMUST00000221815 1193 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
Trbv4A0A075B5I2 Urah-201ENSMUST00000026554 890 ntAPPRIS P3 TSL 1 (best) BASIC15.2■□□□□ 0.02
Trbv4A0A075B5I2 Llgl1-201ENSMUST00000052346 4303 ntAPPRIS P4 TSL 1 (best) BASIC15.2■□□□□ 0.02
Trbv4A0A075B5I2 Pttg1ip-201ENSMUST00000009435 2294 ntAPPRIS P2 TSL 1 (best) BASIC15.2■□□□□ 0.02
Trbv4A0A075B5I2 Trim62-201ENSMUST00000035667 3752 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Trbv4A0A075B5I2 Ecel1-203ENSMUST00000160810 2898 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Trbv4A0A075B5I2 Large2-214ENSMUST00000176774 2377 ntAPPRIS ALT2 TSL 5 BASIC15.2■□□□□ 0.02
Trbv4A0A075B5I2 Gm11960-202ENSMUST00000181063 2858 ntBASIC15.2■□□□□ 0.02
Trbv4A0A075B5I2 Fgf13-203ENSMUST00000119833 2237 ntTSL 5 BASIC15.2■□□□□ 0.02
Trbv4A0A075B5I2 Grhl2-203ENSMUST00000161405 1996 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
Trbv4A0A075B5I2 Anxa3-201ENSMUST00000031447 1595 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Trbv4A0A075B5I2 Gata4-202ENSMUST00000118022 3374 ntAPPRIS P3 TSL 1 (best) BASIC15.19■□□□□ 0.02
Trbv4A0A075B5I2 Elp6-205ENSMUST00000199592 1304 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Trbv4A0A075B5I2 Acox1-201ENSMUST00000066587 3987 ntAPPRIS P3 TSL 1 (best) BASIC15.19■□□□□ 0.02
Trbv4A0A075B5I2 Cspp1-205ENSMUST00000122156 2535 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
Trbv4A0A075B5I2 Gm29361-201ENSMUST00000183323 2000 ntBASIC15.19■□□□□ 0.02
Trbv4A0A075B5I2 Nptn-201ENSMUST00000085651 2024 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
Trbv4A0A075B5I2 Hspa1a-201ENSMUST00000087328 2967 ntAPPRIS P1 BASIC15.19■□□□□ 0.02
Trbv4A0A075B5I2 Rspo4-201ENSMUST00000042217 2371 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Trbv4A0A075B5I2 Papd7-204ENSMUST00000223344 2118 ntAPPRIS P2 TSL 3 BASIC15.19■□□□□ 0.02
Trbv4A0A075B5I2 Dok7-201ENSMUST00000050709 2498 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
Trbv4A0A075B5I2 Cnih1-201ENSMUST00000015903 1538 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Trbv4A0A075B5I2 Zfp125-202ENSMUST00000144811 704 ntTSL 5 BASIC15.19■□□□□ 0.02
Trbv4A0A075B5I2 A930006K02Rik-201ENSMUST00000149172 776 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
Trbv4A0A075B5I2 Tmem255b-201ENSMUST00000167071 1138 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
Retrieved 100 of 76,532 protein–RNA pairs in 62.5 ms