Protein–RNA interactions for Protein: Q9QX15

Clca3a1, Calcium-activated chloride channel regulator 3A-1, mousemouse

Predictions only

Length 902 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clca3a1Q9QX15 A230020J21Rik-202ENSMUST00000192407 1649 ntTSL 2 BASIC21.11■□□□□ 0.97
Clca3a1Q9QX15 Map2k7-201ENSMUST00000003027 1626 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
Clca3a1Q9QX15 Sh3gl3-201ENSMUST00000032874 1647 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
Clca3a1Q9QX15 Pax1-201ENSMUST00000109968 2643 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
Clca3a1Q9QX15 Rab43-202ENSMUST00000032135 1262 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
Clca3a1Q9QX15 Tceal3-201ENSMUST00000060904 1116 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
Clca3a1Q9QX15 Mppe1-201ENSMUST00000073054 2007 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
Clca3a1Q9QX15 Usp21-203ENSMUST00000111306 2185 ntAPPRIS ALT1 TSL 1 (best) BASIC21.1■□□□□ 0.97
Clca3a1Q9QX15 Mid2-201ENSMUST00000112988 2525 ntTSL 5 BASIC21.1■□□□□ 0.97
Clca3a1Q9QX15 Phf14-203ENSMUST00000115511 3336 ntAPPRIS P1 TSL 5 BASIC21.09■□□□□ 0.97
Clca3a1Q9QX15 Luc7l3-203ENSMUST00000107821 2050 ntAPPRIS P1 TSL 5 BASIC21.09■□□□□ 0.97
Clca3a1Q9QX15 Gm13889-201ENSMUST00000099689 1386 ntBASIC21.09■□□□□ 0.97
Clca3a1Q9QX15 Ing1-201ENSMUST00000054399 2814 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
Clca3a1Q9QX15 AW121686-201ENSMUST00000181049 2200 ntTSL 1 (best) BASIC21.08■□□□□ 0.97
Clca3a1Q9QX15 Lrp2-202ENSMUST00000092551 2228 ntTSL 1 (best) BASIC21.08■□□□□ 0.97
Clca3a1Q9QX15 Onecut3-201ENSMUST00000051773 4776 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
Clca3a1Q9QX15 Ccdc142-201ENSMUST00000101254 2317 ntAPPRIS P1 TSL 5 BASIC21.08■□□□□ 0.97
Clca3a1Q9QX15 Nrxn1-213ENSMUST00000172466 2477 ntTSL 5 BASIC21.08■□□□□ 0.97
Clca3a1Q9QX15 Nnat-208ENSMUST00000173595 927 ntTSL 2 BASIC21.08■□□□□ 0.97
Clca3a1Q9QX15 Jmjd6-201ENSMUST00000047616 1668 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.96
Clca3a1Q9QX15 Dbndd2-202ENSMUST00000069385 1658 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.96
Clca3a1Q9QX15 Fcho2-201ENSMUST00000040340 5122 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
Clca3a1Q9QX15 Coro1b-201ENSMUST00000008893 1888 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
Clca3a1Q9QX15 Acvr2b-201ENSMUST00000035093 1729 ntTSL 5 BASIC21.07■□□□□ 0.96
Clca3a1Q9QX15 Gnl1-201ENSMUST00000087200 2848 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
Clca3a1Q9QX15 Plpp2-204ENSMUST00000166804 1566 ntAPPRIS ALT2 TSL 1 (best) BASIC21.07■□□□□ 0.96
Clca3a1Q9QX15 Fus-204ENSMUST00000121616 1102 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
Clca3a1Q9QX15 A930035D04Rik-201ENSMUST00000064013 543 ntBASIC21.07■□□□□ 0.96
Clca3a1Q9QX15 Rhou-201ENSMUST00000045487 3371 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
Clca3a1Q9QX15 Hrk-201ENSMUST00000054836 5382 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
Clca3a1Q9QX15 Terf2-204ENSMUST00000133925 2666 ntAPPRIS P3 TSL 1 (best) BASIC21.06■□□□□ 0.96
Clca3a1Q9QX15 Terf2-202ENSMUST00000068421 2667 ntAPPRIS ALT2 TSL 5 BASIC21.06■□□□□ 0.96
Clca3a1Q9QX15 Med25-205ENSMUST00000207278 2287 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
Clca3a1Q9QX15 Azin2-202ENSMUST00000106068 2049 ntAPPRIS P1 TSL 5 BASIC21.06■□□□□ 0.96
Clca3a1Q9QX15 1700003F12Rik-202ENSMUST00000109709 704 ntAPPRIS ALT2 TSL 3 BASIC21.06■□□□□ 0.96
Clca3a1Q9QX15 1700003F12Rik-201ENSMUST00000045116 704 ntAPPRIS P2 TSL 1 (best) BASIC21.06■□□□□ 0.96
Clca3a1Q9QX15 Bag2-201ENSMUST00000044691 1860 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
Clca3a1Q9QX15 Esyt2-201ENSMUST00000100986 5560 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
Clca3a1Q9QX15 Gng12-204ENSMUST00000114225 1876 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
Clca3a1Q9QX15 Ubac1-201ENSMUST00000036509 1852 ntAPPRIS P2 TSL 1 (best) BASIC21.05■□□□□ 0.96
Clca3a1Q9QX15 Gm40983-202ENSMUST00000222598 1198 ntTSL 5 BASIC21.05■□□□□ 0.96
Clca3a1Q9QX15 A330041J22Rik-201ENSMUST00000150367 1825 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
Clca3a1Q9QX15 Spsb3-202ENSMUST00000068508 2004 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
Clca3a1Q9QX15 Krtap17-1-201ENSMUST00000105049 761 ntAPPRIS P1 BASIC21.04■□□□□ 0.96
Clca3a1Q9QX15 D16Ertd472e-201ENSMUST00000114218 1271 ntAPPRIS P1 TSL 5 BASIC21.04■□□□□ 0.96
Clca3a1Q9QX15 Gm4799-201ENSMUST00000095396 657 ntBASIC21.04■□□□□ 0.96
Clca3a1Q9QX15 Frmd5-201ENSMUST00000110592 2222 ntAPPRIS P1 TSL 5 BASIC21.04■□□□□ 0.96
Clca3a1Q9QX15 6330403L08Rik-202ENSMUST00000187923 5522 ntBASIC21.03■□□□□ 0.96
Clca3a1Q9QX15 Purg-202ENSMUST00000078058 1795 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
Clca3a1Q9QX15 Btbd2-202ENSMUST00000126980 2449 ntAPPRIS ALT2 TSL 5 BASIC21.03■□□□□ 0.96
Clca3a1Q9QX15 Izumo4-205ENSMUST00000218184 1196 ntAPPRIS P1 TSL 2 BASIC21.03■□□□□ 0.96
Clca3a1Q9QX15 Insm2-201ENSMUST00000051857 2660 ntAPPRIS P1 BASIC21.03■□□□□ 0.96
Clca3a1Q9QX15 Cnep1r1-201ENSMUST00000095214 1731 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
Clca3a1Q9QX15 Phactr2-202ENSMUST00000105543 2735 ntAPPRIS P2 TSL 1 (best) BASIC21.03■□□□□ 0.96
Clca3a1Q9QX15 2310061I04Rik-202ENSMUST00000146451 2081 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
Clca3a1Q9QX15 Ppp4c-201ENSMUST00000032936 1359 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
Clca3a1Q9QX15 Krtap28-13-201ENSMUST00000188005 992 ntAPPRIS P1 BASIC21.02■□□□□ 0.96
Clca3a1Q9QX15 AC154454.1-201ENSMUST00000225253 216 ntBASIC21.02■□□□□ 0.96
Clca3a1Q9QX15 Nrsn1-201ENSMUST00000057866 2222 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
Clca3a1Q9QX15 Rasgef1c-203ENSMUST00000093142 2216 ntAPPRIS P3 TSL 1 (best) BASIC21.02■□□□□ 0.96
Clca3a1Q9QX15 Kmt5a-201ENSMUST00000059580 2739 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
Clca3a1Q9QX15 Grin2d-201ENSMUST00000002848 5431 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.95
Clca3a1Q9QX15 Dnajc21-201ENSMUST00000136591 2060 ntAPPRIS P1 TSL 5 BASIC21.01■□□□□ 0.95
Clca3a1Q9QX15 Pcbd2-201ENSMUST00000021958 544 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
Clca3a1Q9QX15 Carm1-201ENSMUST00000034703 3220 ntAPPRIS P3 TSL 1 (best) BASIC21.01■□□□□ 0.95
Clca3a1Q9QX15 Kcnk12-201ENSMUST00000055221 1936 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
Clca3a1Q9QX15 Kdf1-202ENSMUST00000105901 1699 ntAPPRIS P2 TSL 1 (best) BASIC21■□□□□ 0.95
Clca3a1Q9QX15 Sos2-201ENSMUST00000035773 5607 ntAPPRIS P2 TSL 5 BASIC21■□□□□ 0.95
Clca3a1Q9QX15 Mthfd2l-201ENSMUST00000071652 2159 ntAPPRIS P1 TSL 5 BASIC21■□□□□ 0.95
Clca3a1Q9QX15 Dcaf15-201ENSMUST00000041367 2312 ntTSL 1 (best) BASIC21■□□□□ 0.95
Clca3a1Q9QX15 Lrrc14-201ENSMUST00000036423 2093 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
Clca3a1Q9QX15 Fbxw4-201ENSMUST00000046869 2068 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
Clca3a1Q9QX15 Wnt5b-203ENSMUST00000119369 2339 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
Clca3a1Q9QX15 Fbxl14-201ENSMUST00000032094 2963 ntAPPRIS P1 BASIC20.99■□□□□ 0.95
Clca3a1Q9QX15 Hmgn3-202ENSMUST00000162246 983 ntAPPRIS P4 TSL 1 (best) BASIC20.99■□□□□ 0.95
Clca3a1Q9QX15 Gm26533-201ENSMUST00000180550 1790 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
Clca3a1Q9QX15 Ybx3-202ENSMUST00000087865 1684 ntAPPRIS ALT2 TSL 1 (best) BASIC20.99■□□□□ 0.95
Clca3a1Q9QX15 P4ha3-201ENSMUST00000057023 2361 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
Clca3a1Q9QX15 Kctd2-201ENSMUST00000103035 1764 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
Clca3a1Q9QX15 Mir3960-201ENSMUST00000198213 73 ntBASIC20.98■□□□□ 0.95
Clca3a1Q9QX15 Rp9-201ENSMUST00000034763 1134 ntAPPRIS P2 TSL 1 (best) BASIC20.98■□□□□ 0.95
Clca3a1Q9QX15 Gm42699-201ENSMUST00000198104 1657 ntBASIC20.98■□□□□ 0.95
Clca3a1Q9QX15 Npas1-201ENSMUST00000002053 2091 ntAPPRIS P1 TSL 5 BASIC20.98■□□□□ 0.95
Clca3a1Q9QX15 Vkorc1l1-201ENSMUST00000051758 3112 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
Clca3a1Q9QX15 Tsen34-201ENSMUST00000038521 1365 ntAPPRIS P1 TSL 5 BASIC20.97■□□□□ 0.95
Clca3a1Q9QX15 Slc44a1-203ENSMUST00000107646 1974 ntTSL 5 BASIC20.97■□□□□ 0.95
Clca3a1Q9QX15 Apcdd1-201ENSMUST00000096554 2799 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Clca3a1Q9QX15 Kcnc3-203ENSMUST00000207493 2731 ntAPPRIS ALT2 TSL 5 BASIC20.97■□□□□ 0.95
Clca3a1Q9QX15 Gm17110-201ENSMUST00000171248 735 ntTSL 3 BASIC20.97■□□□□ 0.95
Clca3a1Q9QX15 Rnf39-201ENSMUST00000040498 1579 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Clca3a1Q9QX15 Wwc1-201ENSMUST00000018993 4531 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Clca3a1Q9QX15 Hook1-201ENSMUST00000030306 5517 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Clca3a1Q9QX15 Vmac-201ENSMUST00000067931 2174 ntAPPRIS P3 TSL 1 (best) BASIC20.96■□□□□ 0.95
Clca3a1Q9QX15 Neurl4-201ENSMUST00000061837 5188 ntAPPRIS P3 TSL 5 BASIC20.96■□□□□ 0.95
Clca3a1Q9QX15 Cadps-203ENSMUST00000112658 5458 ntAPPRIS ALT2 TSL 1 (best) BASIC20.96■□□□□ 0.95
Clca3a1Q9QX15 Mrps15-201ENSMUST00000030675 937 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Clca3a1Q9QX15 Gm9812-201ENSMUST00000061934 968 ntBASIC20.96■□□□□ 0.95
Clca3a1Q9QX15 Tmem235-201ENSMUST00000093905 1820 ntAPPRIS P1 TSL 5 BASIC20.96■□□□□ 0.95
Clca3a1Q9QX15 Grb2-201ENSMUST00000021090 2709 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Clca3a1Q9QX15 Whrn-202ENSMUST00000063672 2804 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
Retrieved 100 of 76,532 protein–RNA pairs in 71.2 ms