Protein–RNA interactions for Protein: Q9D9H2

Cldnd2, Claudin domain-containing protein 2, mousemouse

Predictions only

Length 167 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cldnd2Q9D9H2 Cacnb3-202ENSMUST00000109150 2670 ntTSL 5 BASIC19.42■□□□□ 0.7
Cldnd2Q9D9H2 Adprhl2-201ENSMUST00000102617 1672 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Cldnd2Q9D9H2 Etv4-202ENSMUST00000107176 2377 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
Cldnd2Q9D9H2 Etv4-201ENSMUST00000017868 2395 ntAPPRIS ALT1 TSL 5 BASIC19.42■□□□□ 0.7
Cldnd2Q9D9H2 Arl5a-201ENSMUST00000036541 5239 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Cldnd2Q9D9H2 Porcn-201ENSMUST00000077595 1872 ntAPPRIS P4 TSL 1 (best) BASIC19.41■□□□□ 0.7
Cldnd2Q9D9H2 Porcn-204ENSMUST00000089403 1854 ntAPPRIS ALT1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Cldnd2Q9D9H2 Mta3-204ENSMUST00000112352 2674 ntAPPRIS ALT2 TSL 1 (best) BASIC19.41■□□□□ 0.7
Cldnd2Q9D9H2 Ubtf-201ENSMUST00000006754 3213 ntAPPRIS ALT2 TSL 1 (best) BASIC19.41■□□□□ 0.7
Cldnd2Q9D9H2 Rbmxl2-201ENSMUST00000098135 1472 ntAPPRIS P1 BASIC19.41■□□□□ 0.7
Cldnd2Q9D9H2 2410017I17Rik-201ENSMUST00000056774 1509 ntTSL 5 BASIC19.4■□□□□ 0.7
Cldnd2Q9D9H2 Acot3-202ENSMUST00000120927 1854 ntAPPRIS ALT2 TSL 1 (best) BASIC19.39■□□□□ 0.7
Cldnd2Q9D9H2 1700028N14Rik-201ENSMUST00000139621 747 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
Cldnd2Q9D9H2 Gm527-201ENSMUST00000058135 1468 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Cldnd2Q9D9H2 Rfx5-205ENSMUST00000107260 2355 ntAPPRIS P1 TSL 5 BASIC19.39■□□□□ 0.69
Cldnd2Q9D9H2 Bend6-201ENSMUST00000062289 2487 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Cldnd2Q9D9H2 Arnt2-201ENSMUST00000085077 6151 ntAPPRIS P2 TSL 1 (best) BASIC19.38■□□□□ 0.69
Cldnd2Q9D9H2 Gas7-203ENSMUST00000108681 1595 ntAPPRIS ALT2 TSL 5 BASIC19.38■□□□□ 0.69
Cldnd2Q9D9H2 St7-209ENSMUST00000115420 2094 ntTSL 5 BASIC19.38■□□□□ 0.69
Cldnd2Q9D9H2 Gtf2a2-203ENSMUST00000119413 1034 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Cldnd2Q9D9H2 Idh3a-205ENSMUST00000217484 2580 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
Cldnd2Q9D9H2 Dbndd2-202ENSMUST00000069385 1658 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Cldnd2Q9D9H2 Chst14-201ENSMUST00000099546 2090 ntAPPRIS P1 BASIC19.37■□□□□ 0.69
Cldnd2Q9D9H2 Phox2a-201ENSMUST00000008090 1609 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Cldnd2Q9D9H2 Rsrc1-202ENSMUST00000065047 2736 ntAPPRIS ALT2 TSL 1 (best) BASIC19.37■□□□□ 0.69
Cldnd2Q9D9H2 Kif1bp-202ENSMUST00000159704 2622 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
Cldnd2Q9D9H2 Rpl19-ps4-201ENSMUST00000167150 625 ntBASIC19.37■□□□□ 0.69
Cldnd2Q9D9H2 BC037034-201ENSMUST00000048421 2490 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Cldnd2Q9D9H2 AC164550.2-201ENSMUST00000219127 2086 ntTSL 5 BASIC19.37■□□□□ 0.69
Cldnd2Q9D9H2 Peli3-201ENSMUST00000025834 1971 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Cldnd2Q9D9H2 Lgi2-201ENSMUST00000039750 6456 ntAPPRIS P3 TSL 1 (best) BASIC19.37■□□□□ 0.69
Cldnd2Q9D9H2 Mxi1-202ENSMUST00000025998 4996 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Cldnd2Q9D9H2 Fgf20-201ENSMUST00000034014 1476 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Cldnd2Q9D9H2 Manf-202ENSMUST00000159283 2247 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Cldnd2Q9D9H2 Nrsn1-201ENSMUST00000057866 2222 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Cldnd2Q9D9H2 Lrrc24-201ENSMUST00000036247 1758 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
Cldnd2Q9D9H2 Eml4-201ENSMUST00000049503 5109 ntAPPRIS P3 TSL 1 (best) BASIC19.35■□□□□ 0.69
Cldnd2Q9D9H2 Acss2-203ENSMUST00000103142 2145 ntTSL 5 BASIC19.35■□□□□ 0.69
Cldnd2Q9D9H2 Pdcd4-203ENSMUST00000165617 1806 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Cldnd2Q9D9H2 Vstm4-201ENSMUST00000053175 2745 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Cldnd2Q9D9H2 Fam60a-202ENSMUST00000081956 2737 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Cldnd2Q9D9H2 Hlx-201ENSMUST00000048572 2278 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Cldnd2Q9D9H2 Pdss1-201ENSMUST00000053729 1642 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Cldnd2Q9D9H2 Eif2ak3-204ENSMUST00000162950 927 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
Cldnd2Q9D9H2 Zdhhc2-202ENSMUST00000128166 1547 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Cldnd2Q9D9H2 2310061I04Rik-202ENSMUST00000146451 2081 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
Cldnd2Q9D9H2 Sh3glb2-203ENSMUST00000113620 1694 ntTSL 1 (best) BASIC19.33■□□□□ 0.69
Cldnd2Q9D9H2 Zfp36l1-202ENSMUST00000165114 1934 ntAPPRIS P1 TSL 5 BASIC19.33■□□□□ 0.69
Cldnd2Q9D9H2 Hibadh-201ENSMUST00000031788 1825 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
Cldnd2Q9D9H2 Mageb3-201ENSMUST00000104936 2341 ntAPPRIS P1 BASIC19.33■□□□□ 0.69
Cldnd2Q9D9H2 Nckap5los-201ENSMUST00000159738 1712 ntTSL 2 BASIC19.33■□□□□ 0.68
Cldnd2Q9D9H2 2010300C02Rik-203ENSMUST00000162875 4634 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Cldnd2Q9D9H2 Macrod2-205ENSMUST00000110063 845 ntTSL 5 BASIC19.32■□□□□ 0.68
Cldnd2Q9D9H2 Lbx1-201ENSMUST00000099401 2484 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Cldnd2Q9D9H2 Etfa-201ENSMUST00000034866 1392 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Cldnd2Q9D9H2 Slc22a17-210ENSMUST00000228495 2340 ntAPPRIS P1 BASIC19.31■□□□□ 0.68
Cldnd2Q9D9H2 Stat5b-201ENSMUST00000004143 5062 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Cldnd2Q9D9H2 Fam60a-203ENSMUST00000111562 906 ntAPPRIS P1 TSL 3 BASIC19.31■□□□□ 0.68
Cldnd2Q9D9H2 Pradc1-201ENSMUST00000032080 1038 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Cldnd2Q9D9H2 Sdccag3-204ENSMUST00000114102 2193 ntAPPRIS P3 TSL 1 (best) BASIC19.31■□□□□ 0.68
Cldnd2Q9D9H2 Tmem9b-201ENSMUST00000033333 1703 ntAPPRIS P2 TSL 1 (best) BASIC19.31■□□□□ 0.68
Cldnd2Q9D9H2 Agap2-201ENSMUST00000039259 5633 ntAPPRIS P2 TSL 1 (best) BASIC19.31■□□□□ 0.68
Cldnd2Q9D9H2 Glrx3-201ENSMUST00000064404 1685 ntAPPRIS P2 TSL 1 (best) BASIC19.3■□□□□ 0.68
Cldnd2Q9D9H2 Gng3-201ENSMUST00000096259 1699 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Cldnd2Q9D9H2 1810026B05Rik-203ENSMUST00000184587 5738 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
Cldnd2Q9D9H2 Fam92a-202ENSMUST00000108285 1639 ntAPPRIS P3 TSL 5 BASIC19.3■□□□□ 0.68
Cldnd2Q9D9H2 Paqr3-203ENSMUST00000112969 2257 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Cldnd2Q9D9H2 Tdp2-203ENSMUST00000223804 1136 ntBASIC19.3■□□□□ 0.68
Cldnd2Q9D9H2 Rnf39-201ENSMUST00000040498 1579 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Cldnd2Q9D9H2 Atpaf1-203ENSMUST00000176047 2330 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Cldnd2Q9D9H2 Srp9-201ENSMUST00000027792 1367 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Cldnd2Q9D9H2 Gm26711-201ENSMUST00000180866 1833 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
Cldnd2Q9D9H2 Irf2bp1-201ENSMUST00000053713 2734 ntAPPRIS P1 BASIC19.3■□□□□ 0.68
Cldnd2Q9D9H2 Ppp4r2-201ENSMUST00000063854 4874 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Cldnd2Q9D9H2 Cbln2-204ENSMUST00000169470 2201 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Cldnd2Q9D9H2 Sdccag3-201ENSMUST00000028293 2031 ntAPPRIS ALT2 TSL 1 (best) BASIC19.29■□□□□ 0.68
Cldnd2Q9D9H2 Anxa5-201ENSMUST00000029266 1731 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Cldnd2Q9D9H2 Tbxa2r-202ENSMUST00000220312 1919 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Cldnd2Q9D9H2 Cntln-204ENSMUST00000169371 5365 ntAPPRIS ALT2 TSL 5 BASIC19.28■□□□□ 0.68
Cldnd2Q9D9H2 Rfx5-204ENSMUST00000107255 2350 ntAPPRIS P1 TSL 5 BASIC19.28■□□□□ 0.68
Cldnd2Q9D9H2 Ppm1g-205ENSMUST00000202294 1868 ntTSL 5 BASIC19.28■□□□□ 0.68
Cldnd2Q9D9H2 Mospd3-201ENSMUST00000037620 1456 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Cldnd2Q9D9H2 Mpzl1-201ENSMUST00000068705 2171 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
Cldnd2Q9D9H2 Mindy2-202ENSMUST00000213380 2521 ntAPPRIS ALT2 TSL 1 (best) BASIC19.27■□□□□ 0.68
Cldnd2Q9D9H2 Mpzl1-202ENSMUST00000111435 2285 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Cldnd2Q9D9H2 Gm26536-201ENSMUST00000181072 1196 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
Cldnd2Q9D9H2 Rufy1-201ENSMUST00000020643 2688 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.67
Cldnd2Q9D9H2 Sel1l3-201ENSMUST00000031090 4512 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Cldnd2Q9D9H2 Zxdc-201ENSMUST00000045740 1612 ntAPPRIS ALT2 TSL 1 (best) BASIC19.26■□□□□ 0.67
Cldnd2Q9D9H2 Rab3il1-202ENSMUST00000117641 2004 ntAPPRIS ALT2 TSL 1 (best) BASIC19.26■□□□□ 0.67
Cldnd2Q9D9H2 Slc25a1-201ENSMUST00000003622 1678 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Cldnd2Q9D9H2 Mfn1-201ENSMUST00000091257 4562 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Cldnd2Q9D9H2 Arf6-201ENSMUST00000050063 1534 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Cldnd2Q9D9H2 Cdkl3-205ENSMUST00000109078 2216 ntAPPRIS ALT2 TSL 1 (best) BASIC19.25■□□□□ 0.67
Cldnd2Q9D9H2 Zmynd12-201ENSMUST00000094819 1464 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Cldnd2Q9D9H2 Tysnd1-201ENSMUST00000020284 2286 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Cldnd2Q9D9H2 Hoxa11-201ENSMUST00000048026 2287 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Cldnd2Q9D9H2 Npr3-205ENSMUST00000228603 2437 ntAPPRIS ALT2 BASIC19.24■□□□□ 0.67
Cldnd2Q9D9H2 Junos-204ENSMUST00000128094 830 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
Cldnd2Q9D9H2 Cys1-203ENSMUST00000156453 1732 ntAPPRIS P1 TSL 2 BASIC19.24■□□□□ 0.67
Retrieved 100 of 76,532 protein–RNA pairs in 58.6 ms