Protein–RNA interactions for Protein: Q9CY16

Mrps28, 28S ribosomal protein S28, mitochondrial, mousemouse

Predictions only

Length 186 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Mrps28Q9CY16 Kcnj6-201ENSMUST00000095873 1773 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
Mrps28Q9CY16 Fam168b-203ENSMUST00000167518 5058 ntTSL 5 BASIC20.23■□□□□ 0.83
Mrps28Q9CY16 Thap8-202ENSMUST00000108187 1184 ntAPPRIS P5 TSL 2 BASIC20.23■□□□□ 0.83
Mrps28Q9CY16 Paqr6-203ENSMUST00000147948 837 ntTSL 2 BASIC20.23■□□□□ 0.83
Mrps28Q9CY16 Stbd1-202ENSMUST00000200941 523 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
Mrps28Q9CY16 Ndufs3-201ENSMUST00000005647 1046 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Mrps28Q9CY16 Hacd1-202ENSMUST00000091429 871 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
Mrps28Q9CY16 Ran-202ENSMUST00000111343 2423 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Mrps28Q9CY16 Rab21-201ENSMUST00000020343 4602 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Mrps28Q9CY16 Grin2d-203ENSMUST00000211713 5244 ntAPPRIS P1 TSL 5 BASIC20.22■□□□□ 0.83
Mrps28Q9CY16 Slc30a1-201ENSMUST00000044954 5244 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Mrps28Q9CY16 Foxa2-202ENSMUST00000109964 2070 ntAPPRIS ALT2 TSL 1 (best) BASIC20.22■□□□□ 0.83
Mrps28Q9CY16 Txndc9-207ENSMUST00000195032 1444 ntAPPRIS P1 TSL 2 BASIC20.22■□□□□ 0.83
Mrps28Q9CY16 Gm15918-201ENSMUST00000137259 689 ntTSL 3 BASIC20.22■□□□□ 0.83
Mrps28Q9CY16 Tmem192-202ENSMUST00000079896 916 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
Mrps28Q9CY16 Tbc1d24-201ENSMUST00000024931 4894 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Mrps28Q9CY16 Hook1-202ENSMUST00000107083 1506 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
Mrps28Q9CY16 Tmem9b-201ENSMUST00000033333 1703 ntAPPRIS P2 TSL 1 (best) BASIC20.22■□□□□ 0.83
Mrps28Q9CY16 Uncx-201ENSMUST00000172997 2498 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Mrps28Q9CY16 Atp5a1-202ENSMUST00000114748 2674 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
Mrps28Q9CY16 Hoxb3-201ENSMUST00000055334 1890 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Mrps28Q9CY16 Eml4-201ENSMUST00000049503 5109 ntAPPRIS P3 TSL 1 (best) BASIC20.2■□□□□ 0.82
Mrps28Q9CY16 1810026B05Rik-203ENSMUST00000184587 5738 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
Mrps28Q9CY16 Pon2-201ENSMUST00000057792 2409 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Mrps28Q9CY16 Gorasp2-205ENSMUST00000133432 1941 ntAPPRIS ALT2 TSL 1 (best) BASIC20.19■□□□□ 0.82
Mrps28Q9CY16 Trim33-201ENSMUST00000029444 8875 ntAPPRIS P4 TSL 1 (best) BASIC20.19■□□□□ 0.82
Mrps28Q9CY16 Nckap5los-201ENSMUST00000159738 1712 ntTSL 2 BASIC20.19■□□□□ 0.82
Mrps28Q9CY16 Ube2g2-204ENSMUST00000174510 2031 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Mrps28Q9CY16 Dcun1d5-201ENSMUST00000034499 1122 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
Mrps28Q9CY16 Crlf2-201ENSMUST00000044579 1323 ntAPPRIS P3 TSL 1 (best) BASIC20.19■□□□□ 0.82
Mrps28Q9CY16 E130309D02Rik-201ENSMUST00000046418 2208 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Mrps28Q9CY16 Onecut3-201ENSMUST00000051773 4776 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Mrps28Q9CY16 Dleu2-204ENSMUST00000182286 666 ntTSL 2 BASIC20.18■□□□□ 0.82
Mrps28Q9CY16 Dleu2-213ENSMUST00000183245 637 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
Mrps28Q9CY16 Asf1a-205ENSMUST00000219282 1150 ntTSL 5 BASIC20.18■□□□□ 0.82
Mrps28Q9CY16 Ube2k-203ENSMUST00000201266 1449 ntTSL 5 BASIC20.18■□□□□ 0.82
Mrps28Q9CY16 Olfm2-203ENSMUST00000215999 1895 ntAPPRIS ALT2 TSL 3 BASIC20.18■□□□□ 0.82
Mrps28Q9CY16 Smurf1-202ENSMUST00000100461 2725 ntAPPRIS ALT1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Mrps28Q9CY16 Fance-203ENSMUST00000114803 1980 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
Mrps28Q9CY16 Gm16286-202ENSMUST00000125127 1683 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Mrps28Q9CY16 St3gal2-202ENSMUST00000117534 2177 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
Mrps28Q9CY16 A530095I07Rik-201ENSMUST00000070942 847 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
Mrps28Q9CY16 Ube2j2-202ENSMUST00000103175 1309 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Mrps28Q9CY16 4930426D05Rik-204ENSMUST00000144487 1393 ntTSL 5 BASIC20.17■□□□□ 0.82
Mrps28Q9CY16 Gm9910-201ENSMUST00000195385 1550 ntBASIC20.17■□□□□ 0.82
Mrps28Q9CY16 Gm21989-201ENSMUST00000174530 1609 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
Mrps28Q9CY16 Hist2h3c1-201ENSMUST00000176059 1820 ntAPPRIS P1 BASIC20.16■□□□□ 0.82
Mrps28Q9CY16 Hist2h3c1-202ENSMUST00000177796 1825 ntBASIC20.16■□□□□ 0.82
Mrps28Q9CY16 Dnajc19-202ENSMUST00000108195 659 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Mrps28Q9CY16 Slc50a1-201ENSMUST00000029565 1022 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Mrps28Q9CY16 Gm9806-201ENSMUST00000051080 552 ntBASIC20.16■□□□□ 0.82
Mrps28Q9CY16 Zcchc11-201ENSMUST00000043368 6054 ntAPPRIS P2 TSL 5 BASIC20.16■□□□□ 0.82
Mrps28Q9CY16 Kctd15-202ENSMUST00000108069 2407 ntAPPRIS P1 TSL 5 BASIC20.16■□□□□ 0.82
Mrps28Q9CY16 Sntb1-202ENSMUST00000110200 1225 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
Mrps28Q9CY16 Zcchc2-202ENSMUST00000119166 6368 ntAPPRIS ALT2 TSL 1 (best) BASIC20.15■□□□□ 0.82
Mrps28Q9CY16 Scarna2-201ENSMUST00000157560 414 ntBASIC20.15■□□□□ 0.82
Mrps28Q9CY16 Tmem158-201ENSMUST00000068140 1712 ntAPPRIS P1 BASIC20.15■□□□□ 0.82
Mrps28Q9CY16 Shb-201ENSMUST00000061986 2244 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
Mrps28Q9CY16 Prrx2-201ENSMUST00000041659 1441 ntAPPRIS P2 TSL 1 (best) BASIC20.14■□□□□ 0.81
Mrps28Q9CY16 Ddx43-201ENSMUST00000113367 2207 ntAPPRIS P1 TSL 5 BASIC20.14■□□□□ 0.81
Mrps28Q9CY16 Klhl2-205ENSMUST00000210166 5126 ntAPPRIS ALT2 TSL 1 (best) BASIC20.14■□□□□ 0.81
Mrps28Q9CY16 Gng3-201ENSMUST00000096259 1699 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Mrps28Q9CY16 Gimap1-205ENSMUST00000204168 1469 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Mrps28Q9CY16 Rpl38-203ENSMUST00000106599 457 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Mrps28Q9CY16 Gm11687-201ENSMUST00000118911 886 ntBASIC20.13■□□□□ 0.81
Mrps28Q9CY16 Gadd45a-201ENSMUST00000043098 1223 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Mrps28Q9CY16 Gm5784-202ENSMUST00000220896 2016 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
Mrps28Q9CY16 Nisch-222ENSMUST00000172142 2780 ntAPPRIS ALT2 TSL 1 (best) BASIC20.12■□□□□ 0.81
Mrps28Q9CY16 2410022M11Rik-201ENSMUST00000186474 1911 ntBASIC20.12■□□□□ 0.81
Mrps28Q9CY16 Gm15688-201ENSMUST00000161394 2418 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
Mrps28Q9CY16 Homer3-201ENSMUST00000003669 2323 ntAPPRIS ALT1 TSL 1 (best) BASIC20.12■□□□□ 0.81
Mrps28Q9CY16 Runx2os1-201ENSMUST00000097320 792 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
Mrps28Q9CY16 Prr5-202ENSMUST00000171460 1719 ntAPPRIS ALT2 TSL 1 (best) BASIC20.12■□□□□ 0.81
Mrps28Q9CY16 Inafm1-201ENSMUST00000169612 1605 ntAPPRIS P1 BASIC20.12■□□□□ 0.81
Mrps28Q9CY16 2610307P16Rik-205ENSMUST00000148885 1870 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
Mrps28Q9CY16 Porcn-201ENSMUST00000077595 1872 ntAPPRIS P4 TSL 1 (best) BASIC20.11■□□□□ 0.81
Mrps28Q9CY16 Porcn-204ENSMUST00000089403 1854 ntAPPRIS ALT1 TSL 1 (best) BASIC20.11■□□□□ 0.81
Mrps28Q9CY16 Dbp-201ENSMUST00000080885 1837 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
Mrps28Q9CY16 Stambp-207ENSMUST00000206592 2152 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
Mrps28Q9CY16 Ppp1ca-201ENSMUST00000046094 1379 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
Mrps28Q9CY16 Plin1-206ENSMUST00000205915 2817 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
Mrps28Q9CY16 Hgh1-201ENSMUST00000023213 1959 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
Mrps28Q9CY16 Oaz2-206ENSMUST00000153700 1843 ntAPPRIS P2 TSL 5 BASIC20.11■□□□□ 0.81
Mrps28Q9CY16 Mlycd-201ENSMUST00000098367 2128 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
Mrps28Q9CY16 Pou6f1-202ENSMUST00000073837 4953 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
Mrps28Q9CY16 Slc30a3-201ENSMUST00000031037 2089 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
Mrps28Q9CY16 Slc16a11-207ENSMUST00000136328 1403 ntTSL 5 BASIC20.1■□□□□ 0.81
Mrps28Q9CY16 Arpc2-201ENSMUST00000006467 1404 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Mrps28Q9CY16 Gpr25-201ENSMUST00000086395 1077 ntAPPRIS P1 BASIC20.1■□□□□ 0.81
Mrps28Q9CY16 Ier5l-201ENSMUST00000065134 2683 ntAPPRIS P1 BASIC20.1■□□□□ 0.81
Mrps28Q9CY16 Mlf2-202ENSMUST00000180095 1475 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Mrps28Q9CY16 Plpp5-201ENSMUST00000068916 1483 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Mrps28Q9CY16 Tshz1-201ENSMUST00000060303 5656 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Mrps28Q9CY16 Arpc5l-202ENSMUST00000112862 1339 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
Mrps28Q9CY16 Gm16437-201ENSMUST00000025669 507 ntBASIC20.09■□□□□ 0.81
Mrps28Q9CY16 Gjd3-201ENSMUST00000062931 837 ntAPPRIS P1 BASIC20.09■□□□□ 0.81
Mrps28Q9CY16 Sh3d21-202ENSMUST00000097891 2384 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
Mrps28Q9CY16 Nisch-201ENSMUST00000022469 5559 ntAPPRIS P3 TSL 2 BASIC20.09■□□□□ 0.81
Mrps28Q9CY16 Srcap-210ENSMUST00000188124 2048 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
Mrps28Q9CY16 B230377A18Rik-202ENSMUST00000192921 1364 ntBASIC20.08■□□□□ 0.81
Retrieved 100 of 76,532 protein–RNA pairs in 34.4 ms