Protein–RNA interactions for Protein: Q9CQL6

Mrpl35, 39S ribosomal protein L35, mitochondrial, mousemouse

Predictions only

Length 188 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Mrpl35Q9CQL6 Hook1-202ENSMUST00000107083 1506 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
Mrpl35Q9CQL6 H1f0-201ENSMUST00000180086 2287 ntAPPRIS P1 BASIC16.56■□□□□ 0.24
Mrpl35Q9CQL6 Arpc5l-202ENSMUST00000112862 1339 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Mrpl35Q9CQL6 Gm11687-201ENSMUST00000118911 886 ntBASIC16.56■□□□□ 0.24
Mrpl35Q9CQL6 Npas1-201ENSMUST00000002053 2091 ntAPPRIS P1 TSL 5 BASIC16.56■□□□□ 0.24
Mrpl35Q9CQL6 Kctd6-201ENSMUST00000022272 1650 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Mrpl35Q9CQL6 Tmem70-203ENSMUST00000177501 1636 ntAPPRIS P3 TSL 1 (best) BASIC16.56■□□□□ 0.24
Mrpl35Q9CQL6 Cadm1-202ENSMUST00000085909 2126 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
Mrpl35Q9CQL6 E130304I02Rik-202ENSMUST00000187873 696 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
Mrpl35Q9CQL6 Ankrd49-205ENSMUST00000216037 1037 ntAPPRIS P1 TSL 2 BASIC16.55■□□□□ 0.24
Mrpl35Q9CQL6 Slc1a5-201ENSMUST00000108496 2764 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Mrpl35Q9CQL6 Gtpbp2-201ENSMUST00000024748 2966 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Mrpl35Q9CQL6 Hdac2-201ENSMUST00000019911 2005 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Mrpl35Q9CQL6 Tspan33-202ENSMUST00000115250 1977 ntAPPRIS ALT1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Mrpl35Q9CQL6 Ccdc177-201ENSMUST00000073251 5775 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Mrpl35Q9CQL6 Agpat5-201ENSMUST00000033847 2841 ntAPPRIS ALT2 TSL 1 (best) BASIC16.54■□□□□ 0.24
Mrpl35Q9CQL6 AC153911.1-201ENSMUST00000220378 758 ntBASIC16.54■□□□□ 0.24
Mrpl35Q9CQL6 Gadd45a-201ENSMUST00000043098 1223 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Mrpl35Q9CQL6 Ubp1-204ENSMUST00000214095 2320 ntAPPRIS ALT1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Mrpl35Q9CQL6 Smarcc1-201ENSMUST00000088716 5717 ntAPPRIS P2 TSL 1 (best) BASIC16.54■□□□□ 0.24
Mrpl35Q9CQL6 Hoxb3-202ENSMUST00000093944 3190 ntAPPRIS P1 TSL 5 BASIC16.54■□□□□ 0.24
Mrpl35Q9CQL6 Kctd2-201ENSMUST00000103035 1764 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Mrpl35Q9CQL6 Tsen34-204ENSMUST00000108630 1779 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
Mrpl35Q9CQL6 Jmjd6-201ENSMUST00000047616 1668 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Mrpl35Q9CQL6 Hoxd9-201ENSMUST00000059272 2136 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Mrpl35Q9CQL6 Taf4-201ENSMUST00000041618 4416 ntAPPRIS P2 TSL 1 (best) BASIC16.52■□□□□ 0.24
Mrpl35Q9CQL6 Gm9910-201ENSMUST00000195385 1550 ntBASIC16.52■□□□□ 0.24
Mrpl35Q9CQL6 Epop-201ENSMUST00000052281 2314 ntAPPRIS P1 BASIC16.51■□□□□ 0.23
Mrpl35Q9CQL6 Mxra7-201ENSMUST00000021170 2063 ntAPPRIS P3 TSL 1 (best) BASIC16.51■□□□□ 0.23
Mrpl35Q9CQL6 2610307P16Rik-205ENSMUST00000148885 1870 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
Mrpl35Q9CQL6 Rbm45-201ENSMUST00000046389 1898 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Mrpl35Q9CQL6 Prph-202ENSMUST00000047104 1865 ntAPPRIS P3 TSL 1 (best) BASIC16.51■□□□□ 0.23
Mrpl35Q9CQL6 A030005K14Rik-201ENSMUST00000193762 1093 ntAPPRIS P1 BASIC16.51■□□□□ 0.23
Mrpl35Q9CQL6 Gas1-202ENSMUST00000223933 1155 ntAPPRIS P2 BASIC16.51■□□□□ 0.23
Mrpl35Q9CQL6 A530095I07Rik-201ENSMUST00000070942 847 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
Mrpl35Q9CQL6 Terc-201ENSMUST00000082862 423 ntBASIC16.51■□□□□ 0.23
Mrpl35Q9CQL6 Nrsn1-201ENSMUST00000057866 2222 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Mrpl35Q9CQL6 A830010M20Rik-207ENSMUST00000162298 1408 ntTSL 5 BASIC16.51■□□□□ 0.23
Mrpl35Q9CQL6 Hexdc-201ENSMUST00000038831 2378 ntAPPRIS ALT2 TSL 5 BASIC16.51■□□□□ 0.23
Mrpl35Q9CQL6 Prrx2-201ENSMUST00000041659 1441 ntAPPRIS P2 TSL 1 (best) BASIC16.51■□□□□ 0.23
Mrpl35Q9CQL6 Slc16a11-201ENSMUST00000094055 1788 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Mrpl35Q9CQL6 Hoxb3-201ENSMUST00000055334 1890 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Mrpl35Q9CQL6 Foxd2-201ENSMUST00000068654 2592 ntAPPRIS P1 BASIC16.5■□□□□ 0.23
Mrpl35Q9CQL6 Gm10499-202ENSMUST00000174778 1698 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
Mrpl35Q9CQL6 Brwd1-203ENSMUST00000113827 2382 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
Mrpl35Q9CQL6 Mir6538-201ENSMUST00000183713 110 ntBASIC16.5■□□□□ 0.23
Mrpl35Q9CQL6 Gm38287-201ENSMUST00000195193 2051 ntTSL 3 BASIC16.5■□□□□ 0.23
Mrpl35Q9CQL6 Rasgef1c-203ENSMUST00000093142 2216 ntAPPRIS P3 TSL 1 (best) BASIC16.5■□□□□ 0.23
Mrpl35Q9CQL6 Fads2-201ENSMUST00000025567 1508 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Mrpl35Q9CQL6 Ctage5-218ENSMUST00000177162 2728 ntTSL 5 BASIC16.49■□□□□ 0.23
Mrpl35Q9CQL6 Cic-202ENSMUST00000163320 6096 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
Mrpl35Q9CQL6 Cic-201ENSMUST00000005578 6099 ntTSL 5 BASIC16.49■□□□□ 0.23
Mrpl35Q9CQL6 Hacd1-202ENSMUST00000091429 871 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
Mrpl35Q9CQL6 Unc119-203ENSMUST00000108295 1371 ntTSL 3 BASIC16.49■□□□□ 0.23
Mrpl35Q9CQL6 4930426D05Rik-204ENSMUST00000144487 1393 ntTSL 5 BASIC16.49■□□□□ 0.23
Mrpl35Q9CQL6 Dyrk2-201ENSMUST00000004281 6129 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Mrpl35Q9CQL6 Zdhhc2-205ENSMUST00000167766 1759 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Mrpl35Q9CQL6 Il17rd-202ENSMUST00000223942 2186 ntBASIC16.48■□□□□ 0.23
Mrpl35Q9CQL6 Ttc9-201ENSMUST00000036116 2042 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Mrpl35Q9CQL6 4930597O21Rik-201ENSMUST00000065878 984 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
Mrpl35Q9CQL6 Gm16286-202ENSMUST00000125127 1683 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Mrpl35Q9CQL6 Fam204a-201ENSMUST00000065286 2035 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Mrpl35Q9CQL6 Slc44a1-203ENSMUST00000107646 1974 ntTSL 5 BASIC16.47■□□□□ 0.23
Mrpl35Q9CQL6 Tbc1d25-203ENSMUST00000143984 2184 ntAPPRIS ALT2 TSL 5 BASIC16.47■□□□□ 0.23
Mrpl35Q9CQL6 Gm20208-202ENSMUST00000219905 1528 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
Mrpl35Q9CQL6 St6galnac6-203ENSMUST00000095044 2394 ntAPPRIS P3 TSL 1 (best) BASIC16.47■□□□□ 0.23
Mrpl35Q9CQL6 Hecw2-202ENSMUST00000097741 1132 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
Mrpl35Q9CQL6 Lgi2-201ENSMUST00000039750 6456 ntAPPRIS P3 TSL 1 (best) BASIC16.47■□□□□ 0.23
Mrpl35Q9CQL6 Ran-202ENSMUST00000111343 2423 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Mrpl35Q9CQL6 Fam181b-201ENSMUST00000051179 2003 ntAPPRIS P1 BASIC16.46■□□□□ 0.23
Mrpl35Q9CQL6 Fam212b-202ENSMUST00000098273 1868 ntAPPRIS ALT2 TSL 1 (best) BASIC16.46■□□□□ 0.23
Mrpl35Q9CQL6 Zcchc14-201ENSMUST00000046386 7444 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Mrpl35Q9CQL6 Vamp4-206ENSMUST00000150040 901 ntAPPRIS P1 TSL 5 BASIC16.46■□□□□ 0.23
Mrpl35Q9CQL6 Runx2os1-201ENSMUST00000097320 792 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
Mrpl35Q9CQL6 Spsb3-205ENSMUST00000120943 1949 ntAPPRIS ALT2 TSL 1 (best) BASIC16.46■□□□□ 0.23
Mrpl35Q9CQL6 Efhd2-201ENSMUST00000036854 2381 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Mrpl35Q9CQL6 Kcnk2-205ENSMUST00000192723 1642 ntAPPRIS ALT1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Mrpl35Q9CQL6 Asf1a-201ENSMUST00000020004 2201 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Mrpl35Q9CQL6 Eva1b-202ENSMUST00000106150 1144 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Mrpl35Q9CQL6 Psmg1-201ENSMUST00000023630 1044 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Mrpl35Q9CQL6 Tceal6-201ENSMUST00000033783 1114 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Mrpl35Q9CQL6 Hmox2-202ENSMUST00000118885 1392 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Mrpl35Q9CQL6 Ppp1cc-202ENSMUST00000102528 2384 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Mrpl35Q9CQL6 Pdpk1-203ENSMUST00000115407 1730 ntTSL 5 BASIC16.45■□□□□ 0.22
Mrpl35Q9CQL6 Ube2k-203ENSMUST00000201266 1449 ntTSL 5 BASIC16.45■□□□□ 0.22
Mrpl35Q9CQL6 Fam126a-206ENSMUST00000197617 2288 ntTSL 5 BASIC16.44■□□□□ 0.22
Mrpl35Q9CQL6 Rab21-201ENSMUST00000020343 4602 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Mrpl35Q9CQL6 Mlf2-202ENSMUST00000180095 1475 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Mrpl35Q9CQL6 Dleu2-204ENSMUST00000182286 666 ntTSL 2 BASIC16.44■□□□□ 0.22
Mrpl35Q9CQL6 Dleu2-213ENSMUST00000183245 637 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
Mrpl35Q9CQL6 AC125444.1-201ENSMUST00000223536 639 ntAPPRIS P1 BASIC16.44■□□□□ 0.22
Mrpl35Q9CQL6 Slc50a1-201ENSMUST00000029565 1022 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Mrpl35Q9CQL6 Dnajc21-201ENSMUST00000136591 2060 ntAPPRIS P1 TSL 5 BASIC16.44■□□□□ 0.22
Mrpl35Q9CQL6 Txndc9-207ENSMUST00000195032 1444 ntAPPRIS P1 TSL 2 BASIC16.44■□□□□ 0.22
Mrpl35Q9CQL6 Plvap-201ENSMUST00000048452 1987 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Mrpl35Q9CQL6 Iars2-202ENSMUST00000110974 2431 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
Mrpl35Q9CQL6 Dbndd2-202ENSMUST00000069385 1658 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Mrpl35Q9CQL6 Id3-201ENSMUST00000008016 1278 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Mrpl35Q9CQL6 Gpr25-201ENSMUST00000086395 1077 ntAPPRIS P1 BASIC16.43■□□□□ 0.22
Mrpl35Q9CQL6 Gm21989-201ENSMUST00000174530 1609 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
Retrieved 100 of 76,532 protein–RNA pairs in 38.7 ms