Protein–RNA interactions for Protein: Q99M51

Nck1, Cytoplasmic protein NCK1, mousemouse

Predictions only

Length 377 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nck1Q99M51 Antxr1-204ENSMUST00000204805 2156 ntAPPRIS ALT2 TSL 5 BASIC21.46■■□□□ 1.03
Nck1Q99M51 Mgrn1-202ENSMUST00000070658 3290 ntAPPRIS P3 TSL 1 (best) BASIC21.45■■□□□ 1.02
Nck1Q99M51 Phf2-201ENSMUST00000035540 5494 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
Nck1Q99M51 Zfp513-201ENSMUST00000031562 2213 ntTSL 1 (best) BASIC21.44■■□□□ 1.02
Nck1Q99M51 Banp-202ENSMUST00000093078 2289 ntTSL 1 (best) BASIC21.44■■□□□ 1.02
Nck1Q99M51 Gemin7-202ENSMUST00000117222 1023 ntAPPRIS P1 TSL 2 BASIC21.44■■□□□ 1.02
Nck1Q99M51 Pax1-201ENSMUST00000109968 2643 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
Nck1Q99M51 Susd6-203ENSMUST00000220238 2127 ntAPPRIS ALT2 TSL 1 (best) BASIC21.44■■□□□ 1.02
Nck1Q99M51 Ccnyl1-203ENSMUST00000187170 1506 ntAPPRIS P1 TSL 5 BASIC21.44■■□□□ 1.02
Nck1Q99M51 Cnot6-201ENSMUST00000020624 2498 ntTSL 1 (best) BASIC21.44■■□□□ 1.02
Nck1Q99M51 Kctd2-201ENSMUST00000103035 1764 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
Nck1Q99M51 Lrrc24-201ENSMUST00000036247 1758 ntTSL 1 (best) BASIC21.43■■□□□ 1.02
Nck1Q99M51 Inafm2-201ENSMUST00000149978 3053 ntAPPRIS P1 BASIC21.43■■□□□ 1.02
Nck1Q99M51 Dcaf15-201ENSMUST00000041367 2312 ntTSL 1 (best) BASIC21.43■■□□□ 1.02
Nck1Q99M51 C2cd4d-201ENSMUST00000169433 1321 ntAPPRIS P1 TSL 3 BASIC21.43■■□□□ 1.02
Nck1Q99M51 Gm4419-202ENSMUST00000226239 1431 ntBASIC21.43■■□□□ 1.02
Nck1Q99M51 Kcnq5-201ENSMUST00000029667 6562 ntAPPRIS P3 TSL 1 (best) BASIC21.43■■□□□ 1.02
Nck1Q99M51 Mnx1-202ENSMUST00000165512 2245 ntAPPRIS P2 TSL 1 (best) BASIC21.43■■□□□ 1.02
Nck1Q99M51 Ppp1r12c-201ENSMUST00000013886 2983 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
Nck1Q99M51 Tmem70-203ENSMUST00000177501 1636 ntAPPRIS P3 TSL 1 (best) BASIC21.42■■□□□ 1.02
Nck1Q99M51 Tcte3-201ENSMUST00000040746 788 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
Nck1Q99M51 Tcte3-202ENSMUST00000097398 632 ntTSL 1 (best) BASIC21.42■■□□□ 1.02
Nck1Q99M51 Smarcc1-201ENSMUST00000088716 5717 ntAPPRIS P2 TSL 1 (best) BASIC21.42■■□□□ 1.02
Nck1Q99M51 Cdc42bpb-201ENSMUST00000041965 6714 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
Nck1Q99M51 Arpc2-203ENSMUST00000113820 1439 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
Nck1Q99M51 Pm20d2-202ENSMUST00000119167 1339 ntTSL 1 (best) BASIC21.41■■□□□ 1.02
Nck1Q99M51 Snx3-203ENSMUST00000105500 753 ntTSL 5 BASIC21.41■■□□□ 1.02
Nck1Q99M51 Rab3il1-202ENSMUST00000117641 2004 ntAPPRIS ALT2 TSL 1 (best) BASIC21.41■■□□□ 1.02
Nck1Q99M51 Dlx2-201ENSMUST00000024159 2473 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.02
Nck1Q99M51 Endog-201ENSMUST00000015481 1063 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
Nck1Q99M51 Map2k7-207ENSMUST00000110999 1578 ntTSL 1 (best) BASIC21.39■■□□□ 1.01
Nck1Q99M51 Zcchc14-201ENSMUST00000046386 7444 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
Nck1Q99M51 Hand2-201ENSMUST00000040104 2351 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
Nck1Q99M51 Ankrd60-202ENSMUST00000119453 1084 ntAPPRIS P2 TSL 2 BASIC21.38■■□□□ 1.01
Nck1Q99M51 Notum-202ENSMUST00000106177 2212 ntAPPRIS P1 TSL 5 BASIC21.38■■□□□ 1.01
Nck1Q99M51 Ski-201ENSMUST00000030917 5522 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
Nck1Q99M51 Ppp4c-211ENSMUST00000206570 1400 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
Nck1Q99M51 Dennd5a-201ENSMUST00000080437 5004 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
Nck1Q99M51 Snx7-201ENSMUST00000029639 2021 ntAPPRIS P2 TSL 1 (best) BASIC21.37■■□□□ 1.01
Nck1Q99M51 Mlx-201ENSMUST00000017945 1965 ntAPPRIS P3 TSL 1 (best) BASIC21.37■■□□□ 1.01
Nck1Q99M51 P4htm-201ENSMUST00000006853 1841 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
Nck1Q99M51 Rab21-201ENSMUST00000020343 4602 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
Nck1Q99M51 Chst14-201ENSMUST00000099546 2090 ntAPPRIS P1 BASIC21.36■■□□□ 1.01
Nck1Q99M51 Ubac1-201ENSMUST00000036509 1852 ntAPPRIS P2 TSL 1 (best) BASIC21.35■■□□□ 1.01
Nck1Q99M51 Rfx5-204ENSMUST00000107255 2350 ntAPPRIS P1 TSL 5 BASIC21.35■■□□□ 1.01
Nck1Q99M51 Gltp-203ENSMUST00000112214 944 ntTSL 3 BASIC21.35■■□□□ 1.01
Nck1Q99M51 Uba52-205ENSMUST00000129909 705 ntAPPRIS P1 TSL 2 BASIC21.35■■□□□ 1.01
Nck1Q99M51 Taf4-204ENSMUST00000227325 4380 ntAPPRIS ALT2 BASIC21.35■■□□□ 1.01
Nck1Q99M51 Ttc7b-201ENSMUST00000062957 3446 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
Nck1Q99M51 Kcnc3-203ENSMUST00000207493 2731 ntAPPRIS ALT2 TSL 5 BASIC21.35■■□□□ 1.01
Nck1Q99M51 Prph-201ENSMUST00000024249 1769 ntAPPRIS ALT2 TSL 1 (best) BASIC21.34■■□□□ 1.01
Nck1Q99M51 Cic-202ENSMUST00000163320 6096 ntTSL 1 (best) BASIC21.34■■□□□ 1.01
Nck1Q99M51 Cic-201ENSMUST00000005578 6099 ntTSL 5 BASIC21.34■■□□□ 1.01
Nck1Q99M51 Mgrn1-201ENSMUST00000023159 3293 ntAPPRIS ALT2 TSL 1 (best) BASIC21.33■■□□□ 1.01
Nck1Q99M51 1700026D11Rik-201ENSMUST00000126910 2033 ntTSL 1 (best) BASIC21.33■■□□□ 1.01
Nck1Q99M51 Ccdc177-201ENSMUST00000073251 5775 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
Nck1Q99M51 Acvr2b-201ENSMUST00000035093 1729 ntTSL 5 BASIC21.33■■□□□ 1.01
Nck1Q99M51 Tmem158-201ENSMUST00000068140 1712 ntAPPRIS P1 BASIC21.33■■□□□ 1.01
Nck1Q99M51 Pitx2-202ENSMUST00000042587 2271 ntAPPRIS ALT1 TSL 1 (best) BASIC21.33■■□□□ 1.01
Nck1Q99M51 Pard6a-205ENSMUST00000212430 1261 ntAPPRIS ALT1 TSL 1 (best) BASIC21.33■■□□□ 1.01
Nck1Q99M51 Mtf2-202ENSMUST00000112626 1968 ntTSL 5 BASIC21.33■■□□□ 1.01
Nck1Q99M51 Mapkap1-201ENSMUST00000113123 1530 ntTSL 5 BASIC21.33■■□□□ 1
Nck1Q99M51 Fank1-204ENSMUST00000209511 1392 ntTSL 5 BASIC21.33■■□□□ 1
Nck1Q99M51 Tmem200b-201ENSMUST00000094666 1370 ntAPPRIS P1 BASIC21.33■■□□□ 1
Nck1Q99M51 Stard3nl-201ENSMUST00000039694 1327 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
Nck1Q99M51 Slc30a3-201ENSMUST00000031037 2089 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
Nck1Q99M51 Hoxa11-201ENSMUST00000048026 2287 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
Nck1Q99M51 Mxra7-202ENSMUST00000047715 757 ntAPPRIS ALT2 TSL 1 (best) BASIC21.31■■□□□ 1
Nck1Q99M51 Rhbdl1-201ENSMUST00000026831 1711 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
Nck1Q99M51 Cdk2ap1-201ENSMUST00000031341 1315 ntAPPRIS P2 TSL 1 (best) BASIC21.3■■□□□ 1
Nck1Q99M51 Ptbp3-208ENSMUST00000172768 2147 ntAPPRIS ALT2 TSL 5 BASIC21.3■■□□□ 1
Nck1Q99M51 Smarcc2-205ENSMUST00000218228 603 ntTSL 5 BASIC21.3■■□□□ 1
Nck1Q99M51 Mfsd4b2-201ENSMUST00000045526 2285 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
Nck1Q99M51 March2-206ENSMUST00000173329 2566 ntTSL 2 BASIC21.3■■□□□ 1
Nck1Q99M51 Peli3-201ENSMUST00000025834 1971 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
Nck1Q99M51 Olfm2-203ENSMUST00000215999 1895 ntAPPRIS ALT2 TSL 3 BASIC21.29■■□□□ 1
Nck1Q99M51 B230322F03Rik-201ENSMUST00000181932 1569 ntBASIC21.28■■□□□ 1
Nck1Q99M51 Dyrk2-201ENSMUST00000004281 6129 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
Nck1Q99M51 A230087F16Rik-201ENSMUST00000181055 2098 ntTSL 1 (best) BASIC21.27■■□□□ 1
Nck1Q99M51 Spire2-201ENSMUST00000010298 2330 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
Nck1Q99M51 Dmrt3-201ENSMUST00000048935 2390 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
Nck1Q99M51 Picalm-205ENSMUST00000207225 3489 ntTSL 1 (best) BASIC21.27■■□□□ 1
Nck1Q99M51 Dhrs13-201ENSMUST00000021187 1779 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
Nck1Q99M51 Sdccag3-204ENSMUST00000114102 2193 ntAPPRIS P3 TSL 1 (best) BASIC21.27■■□□□ 1
Nck1Q99M51 Gm6277-202ENSMUST00000224036 2779 ntBASIC21.26■□□□□ 0.99
Nck1Q99M51 Gnpnat1-201ENSMUST00000046191 2788 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
Nck1Q99M51 Sdccag3-201ENSMUST00000028293 2031 ntAPPRIS ALT2 TSL 1 (best) BASIC21.26■□□□□ 0.99
Nck1Q99M51 Cops6-202ENSMUST00000110951 1098 ntAPPRIS ALT2 TSL 1 (best) BASIC21.26■□□□□ 0.99
Nck1Q99M51 Xbp1-201ENSMUST00000063084 2129 ntAPPRIS P2 TSL 1 (best) BASIC21.26■□□□□ 0.99
Nck1Q99M51 A230020J21Rik-202ENSMUST00000192407 1649 ntTSL 2 BASIC21.26■□□□□ 0.99
Nck1Q99M51 Sh3gl3-201ENSMUST00000032874 1647 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
Nck1Q99M51 Bend6-201ENSMUST00000062289 2487 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
Nck1Q99M51 Gm6934-201ENSMUST00000194780 1905 ntBASIC21.25■□□□□ 0.99
Nck1Q99M51 Eml4-202ENSMUST00000096766 5445 ntAPPRIS ALT2 TSL 1 (best) BASIC21.25■□□□□ 0.99
Nck1Q99M51 Dmtn-209ENSMUST00000228295 2572 ntBASIC21.25■□□□□ 0.99
Nck1Q99M51 Homer1-207ENSMUST00000109494 2468 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
Nck1Q99M51 Rbm45-201ENSMUST00000046389 1898 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
Nck1Q99M51 Fbxl3-204ENSMUST00000132004 2534 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
Nck1Q99M51 Pou2f2-204ENSMUST00000108416 1754 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
Nck1Q99M51 Fbxl5-205ENSMUST00000121736 2144 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
Retrieved 100 of 76,532 protein–RNA pairs in 103.5 ms