Protein–RNA interactions for Protein: Q91XY8

Pcdhga11, Protocadherin gamma A11, mousemouse

Predictions only

Length 933 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhga11Q91XY8 Slc17a7-201ENSMUST00000085374 2915 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
Pcdhga11Q91XY8 Esyt2-201ENSMUST00000100986 5560 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
Pcdhga11Q91XY8 Gm5784-202ENSMUST00000220896 2016 ntTSL 1 (best) BASIC21.56■■□□□ 1.04
Pcdhga11Q91XY8 Mppe1-201ENSMUST00000073054 2007 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
Pcdhga11Q91XY8 Gm26533-201ENSMUST00000180550 1790 ntTSL 1 (best) BASIC21.56■■□□□ 1.04
Pcdhga11Q91XY8 Tmem260-210ENSMUST00000227440 2222 ntAPPRIS ALT2 BASIC21.56■■□□□ 1.04
Pcdhga11Q91XY8 Klhl22-201ENSMUST00000117192 2754 ntTSL 5 BASIC21.56■■□□□ 1.04
Pcdhga11Q91XY8 Nckap5los-201ENSMUST00000159738 1712 ntTSL 2 BASIC21.56■■□□□ 1.04
Pcdhga11Q91XY8 Gm28513-201ENSMUST00000191474 613 ntTSL 3 BASIC21.56■■□□□ 1.04
Pcdhga11Q91XY8 Gm40983-202ENSMUST00000222598 1198 ntTSL 5 BASIC21.56■■□□□ 1.04
Pcdhga11Q91XY8 Foxd2-201ENSMUST00000068654 2592 ntAPPRIS P1 BASIC21.55■■□□□ 1.04
Pcdhga11Q91XY8 Tmem9b-201ENSMUST00000033333 1703 ntAPPRIS P2 TSL 1 (best) BASIC21.55■■□□□ 1.04
Pcdhga11Q91XY8 Cnep1r1-201ENSMUST00000095214 1731 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
Pcdhga11Q91XY8 Gm13889-202ENSMUST00000148314 1240 ntAPPRIS P1 BASIC21.55■■□□□ 1.04
Pcdhga11Q91XY8 Porcn-201ENSMUST00000077595 1872 ntAPPRIS P4 TSL 1 (best) BASIC21.55■■□□□ 1.04
Pcdhga11Q91XY8 Porcn-204ENSMUST00000089403 1854 ntAPPRIS ALT1 TSL 1 (best) BASIC21.55■■□□□ 1.04
Pcdhga11Q91XY8 Dact1-202ENSMUST00000150639 2448 ntAPPRIS P1 TSL 3 BASIC21.55■■□□□ 1.04
Pcdhga11Q91XY8 Vdac2-201ENSMUST00000022293 1954 ntAPPRIS P2 TSL 1 (best) BASIC21.54■■□□□ 1.04
Pcdhga11Q91XY8 6330403L08Rik-202ENSMUST00000187923 5522 ntBASIC21.54■■□□□ 1.04
Pcdhga11Q91XY8 Gm13889-201ENSMUST00000099689 1386 ntBASIC21.54■■□□□ 1.04
Pcdhga11Q91XY8 Ltk-201ENSMUST00000028759 3080 ntAPPRIS P4 TSL 1 (best) BASIC21.54■■□□□ 1.04
Pcdhga11Q91XY8 Gm26917-201ENSMUST00000182520 869 ntTSL 5 BASIC21.54■■□□□ 1.04
Pcdhga11Q91XY8 Gm4799-201ENSMUST00000095396 657 ntBASIC21.54■■□□□ 1.04
Pcdhga11Q91XY8 Ppp4c-201ENSMUST00000032936 1359 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
Pcdhga11Q91XY8 Azin2-202ENSMUST00000106068 2049 ntAPPRIS P1 TSL 5 BASIC21.53■■□□□ 1.04
Pcdhga11Q91XY8 Pdgfb-201ENSMUST00000000500 2918 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
Pcdhga11Q91XY8 Gng3-201ENSMUST00000096259 1699 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
Pcdhga11Q91XY8 Ccdc142-201ENSMUST00000101254 2317 ntAPPRIS P1 TSL 5 BASIC21.52■■□□□ 1.04
Pcdhga11Q91XY8 Asf1a-201ENSMUST00000020004 2201 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
Pcdhga11Q91XY8 Ube2q1-201ENSMUST00000038356 3077 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.03
Pcdhga11Q91XY8 Ip6k1-208ENSMUST00000176854 2251 ntTSL 1 (best) BASIC21.52■■□□□ 1.03
Pcdhga11Q91XY8 Srcap-210ENSMUST00000188124 2048 ntTSL 1 (best) BASIC21.51■■□□□ 1.03
Pcdhga11Q91XY8 Kcnk2-205ENSMUST00000192723 1642 ntAPPRIS ALT1 TSL 1 (best) BASIC21.51■■□□□ 1.03
Pcdhga11Q91XY8 Evl-201ENSMUST00000021689 2180 ntAPPRIS ALT2 TSL 1 (best) BASIC21.51■■□□□ 1.03
Pcdhga11Q91XY8 Whrn-202ENSMUST00000063672 2804 ntTSL 1 (best) BASIC21.51■■□□□ 1.03
Pcdhga11Q91XY8 A930035D04Rik-201ENSMUST00000064013 543 ntBASIC21.51■■□□□ 1.03
Pcdhga11Q91XY8 Stambp-207ENSMUST00000206592 2152 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
Pcdhga11Q91XY8 6330420H09Rik-201ENSMUST00000211371 1316 ntTSL 1 (best) BASIC21.51■■□□□ 1.03
Pcdhga11Q91XY8 Dbp-201ENSMUST00000080885 1837 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
Pcdhga11Q91XY8 Rmnd5a-201ENSMUST00000002292 6165 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
Pcdhga11Q91XY8 E330009J07Rik-201ENSMUST00000039008 1949 ntTSL 1 (best) BASIC21.49■■□□□ 1.03
Pcdhga11Q91XY8 Atxn7l2-201ENSMUST00000102633 3044 ntAPPRIS P2 TSL 1 (best) BASIC21.49■■□□□ 1.03
Pcdhga11Q91XY8 Pan3-201ENSMUST00000031651 5048 ntAPPRIS P2 TSL 5 BASIC21.49■■□□□ 1.03
Pcdhga11Q91XY8 Tmem158-201ENSMUST00000068140 1712 ntAPPRIS P1 BASIC21.49■■□□□ 1.03
Pcdhga11Q91XY8 Cbln2-203ENSMUST00000122464 1907 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
Pcdhga11Q91XY8 Phf14-203ENSMUST00000115511 3336 ntAPPRIS P1 TSL 5 BASIC21.48■■□□□ 1.03
Pcdhga11Q91XY8 Ddx43-201ENSMUST00000113367 2207 ntAPPRIS P1 TSL 5 BASIC21.48■■□□□ 1.03
Pcdhga11Q91XY8 Fus-204ENSMUST00000121616 1102 ntTSL 1 (best) BASIC21.47■■□□□ 1.03
Pcdhga11Q91XY8 Impdh1-201ENSMUST00000078155 2437 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
Pcdhga11Q91XY8 Abhd17c-201ENSMUST00000117085 2238 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
Pcdhga11Q91XY8 Kctd6-201ENSMUST00000022272 1650 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
Pcdhga11Q91XY8 Tmpo-204ENSMUST00000099355 1953 ntTSL 1 (best) BASIC21.47■■□□□ 1.03
Pcdhga11Q91XY8 Gm20208-202ENSMUST00000219905 1528 ntTSL 1 (best) BASIC21.46■■□□□ 1.03
Pcdhga11Q91XY8 Nrxn1-213ENSMUST00000172466 2477 ntTSL 5 BASIC21.46■■□□□ 1.03
Pcdhga11Q91XY8 Pou4f1-201ENSMUST00000053016 4445 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
Pcdhga11Q91XY8 Ctage5-203ENSMUST00000170992 2785 ntTSL 1 (best) BASIC21.45■■□□□ 1.02
Pcdhga11Q91XY8 Insc-208ENSMUST00000169913 2321 ntAPPRIS P1 TSL 5 BASIC21.45■■□□□ 1.02
Pcdhga11Q91XY8 Rbm45-201ENSMUST00000046389 1898 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
Pcdhga11Q91XY8 Ctage5-218ENSMUST00000177162 2728 ntTSL 5 BASIC21.44■■□□□ 1.02
Pcdhga11Q91XY8 Iglon5-201ENSMUST00000107974 2622 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
Pcdhga11Q91XY8 Mlycd-201ENSMUST00000098367 2128 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
Pcdhga11Q91XY8 Kdf1-202ENSMUST00000105901 1699 ntAPPRIS P2 TSL 1 (best) BASIC21.44■■□□□ 1.02
Pcdhga11Q91XY8 Hook1-201ENSMUST00000030306 5517 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
Pcdhga11Q91XY8 Tmbim4-204ENSMUST00000134797 486 ntTSL 1 (best) BASIC21.43■■□□□ 1.02
Pcdhga11Q91XY8 Izumo4-205ENSMUST00000218184 1196 ntAPPRIS P1 TSL 2 BASIC21.43■■□□□ 1.02
Pcdhga11Q91XY8 Gm9812-201ENSMUST00000061934 968 ntBASIC21.43■■□□□ 1.02
Pcdhga11Q91XY8 Olfm2-203ENSMUST00000215999 1895 ntAPPRIS ALT2 TSL 3 BASIC21.43■■□□□ 1.02
Pcdhga11Q91XY8 Micu2-201ENSMUST00000022543 2329 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
Pcdhga11Q91XY8 Cadps-203ENSMUST00000112658 5458 ntAPPRIS ALT2 TSL 1 (best) BASIC21.42■■□□□ 1.02
Pcdhga11Q91XY8 Krtap17-1-201ENSMUST00000105049 761 ntAPPRIS P1 BASIC21.42■■□□□ 1.02
Pcdhga11Q91XY8 D16Ertd472e-201ENSMUST00000114218 1271 ntAPPRIS P1 TSL 5 BASIC21.42■■□□□ 1.02
Pcdhga11Q91XY8 Mir3960-201ENSMUST00000198213 73 ntBASIC21.42■■□□□ 1.02
Pcdhga11Q91XY8 Rab43-202ENSMUST00000032135 1262 ntTSL 1 (best) BASIC21.42■■□□□ 1.02
Pcdhga11Q91XY8 Tceal3-201ENSMUST00000060904 1116 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
Pcdhga11Q91XY8 Ankrd49-205ENSMUST00000216037 1037 ntAPPRIS P1 TSL 2 BASIC21.41■■□□□ 1.02
Pcdhga11Q91XY8 Slc30a3-201ENSMUST00000031037 2089 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
Pcdhga11Q91XY8 Lrrc24-201ENSMUST00000036247 1758 ntTSL 1 (best) BASIC21.41■■□□□ 1.02
Pcdhga11Q91XY8 AC154454.1-201ENSMUST00000225253 216 ntBASIC21.4■■□□□ 1.02
Pcdhga11Q91XY8 Eid1-201ENSMUST00000164756 1691 ntAPPRIS P1 BASIC21.4■■□□□ 1.02
Pcdhga11Q91XY8 Nog-201ENSMUST00000061728 1695 ntAPPRIS P1 BASIC21.4■■□□□ 1.02
Pcdhga11Q91XY8 Evl-202ENSMUST00000077735 2121 ntAPPRIS P3 TSL 1 (best) BASIC21.4■■□□□ 1.02
Pcdhga11Q91XY8 Kcnj6-201ENSMUST00000095873 1773 ntTSL 1 (best) BASIC21.39■■□□□ 1.01
Pcdhga11Q91XY8 Pdpk1-203ENSMUST00000115407 1730 ntTSL 5 BASIC21.39■■□□□ 1.01
Pcdhga11Q91XY8 AC153911.1-201ENSMUST00000220378 758 ntBASIC21.39■■□□□ 1.01
Pcdhga11Q91XY8 Gnl1-201ENSMUST00000087200 2848 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
Pcdhga11Q91XY8 Strn3-202ENSMUST00000169503 2791 ntTSL 1 (best) BASIC21.38■■□□□ 1.01
Pcdhga11Q91XY8 Kmt5a-201ENSMUST00000059580 2739 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
Pcdhga11Q91XY8 Gm12818-201ENSMUST00000117562 1349 ntBASIC21.38■■□□□ 1.01
Pcdhga11Q91XY8 Trappc6b-203ENSMUST00000217863 797 ntTSL 2 BASIC21.38■■□□□ 1.01
Pcdhga11Q91XY8 Ubac1-201ENSMUST00000036509 1852 ntAPPRIS P2 TSL 1 (best) BASIC21.38■■□□□ 1.01
Pcdhga11Q91XY8 Rfxap-201ENSMUST00000044373 2162 ntAPPRIS ALT2 TSL 1 (best) BASIC21.38■■□□□ 1.01
Pcdhga11Q91XY8 Dusp5-201ENSMUST00000038287 2473 ntAPPRIS P1 TSL 5 BASIC21.38■■□□□ 1.01
Pcdhga11Q91XY8 Epb41l4b-201ENSMUST00000030142 3247 ntAPPRIS P2 TSL 1 (best) BASIC21.38■■□□□ 1.01
Pcdhga11Q91XY8 Elf2-203ENSMUST00000108051 2514 ntTSL 1 (best) BASIC21.37■■□□□ 1.01
Pcdhga11Q91XY8 Sorcs2-202ENSMUST00000070720 2089 ntTSL 1 (best) BASIC21.37■■□□□ 1.01
Pcdhga11Q91XY8 1110008P14Rik-201ENSMUST00000048792 680 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
Pcdhga11Q91XY8 Fads2-201ENSMUST00000025567 1508 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
Pcdhga11Q91XY8 Kansl1l-202ENSMUST00000113987 2342 ntTSL 1 (best) BASIC21.37■■□□□ 1.01
Pcdhga11Q91XY8 Txnrd1-208ENSMUST00000219962 2297 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
Pcdhga11Q91XY8 Krtap28-13-201ENSMUST00000188005 992 ntAPPRIS P1 BASIC21.36■■□□□ 1.01
Retrieved 100 of 76,532 protein–RNA pairs in 48.7 ms