Protein–RNA interactions for Protein: Q8CG46

Smc5, Structural maintenance of chromosomes protein 5, mousemouse

Known RBP Predictions only

Length 1,101 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smc5Q8CG46 Kcnk12-201ENSMUST00000055221 1936 ntAPPRIS P1 TSL 1 (best) BASIC28.11■■■□□ 2.09
Smc5Q8CG46 Ccdc9-201ENSMUST00000041010 2379 ntAPPRIS P3 TSL 1 (best) BASIC28.1■■■□□ 2.09
Smc5Q8CG46 Drd4-201ENSMUST00000026569 2799 ntAPPRIS P1 TSL 1 (best) BASIC28.1■■■□□ 2.09
Smc5Q8CG46 Kcnk2-205ENSMUST00000192723 1642 ntAPPRIS ALT1 TSL 1 (best) BASIC28.1■■■□□ 2.09
Smc5Q8CG46 Peli3-201ENSMUST00000025834 1971 ntAPPRIS P1 TSL 1 (best) BASIC28.1■■■□□ 2.09
Smc5Q8CG46 Ing2-201ENSMUST00000080353 2812 ntAPPRIS P1 TSL 1 (best) BASIC28.1■■■□□ 2.09
Smc5Q8CG46 Msl2-202ENSMUST00000189616 2612 ntTSL 5 BASIC28.09■■■□□ 2.09
Smc5Q8CG46 Ptpn4-203ENSMUST00000163435 2365 ntTSL 1 (best) BASIC28.09■■■□□ 2.09
Smc5Q8CG46 Carm1-201ENSMUST00000034703 3220 ntAPPRIS P3 TSL 1 (best) BASIC28.09■■■□□ 2.09
Smc5Q8CG46 AC061963.1-201ENSMUST00000213180 1765 ntTSL 5 BASIC28.09■■■□□ 2.09
Smc5Q8CG46 AW121686-201ENSMUST00000181049 2200 ntTSL 1 (best) BASIC28.08■■■□□ 2.09
Smc5Q8CG46 Uba52-207ENSMUST00000140679 697 ntAPPRIS P1 TSL 2 BASIC28.08■■■□□ 2.09
Smc5Q8CG46 Rfx5-204ENSMUST00000107255 2350 ntAPPRIS P1 TSL 5 BASIC28.08■■■□□ 2.09
Smc5Q8CG46 Atp5j-201ENSMUST00000023608 809 ntAPPRIS P1 TSL 1 (best) BASIC28.07■■■□□ 2.08
Smc5Q8CG46 Irak1-202ENSMUST00000068286 2537 ntAPPRIS P3 TSL 1 (best) BASIC28.07■■■□□ 2.08
Smc5Q8CG46 Tmem98-201ENSMUST00000040865 1633 ntAPPRIS P1 TSL 1 (best) BASIC28.06■■■□□ 2.08
Smc5Q8CG46 Ptbp3-208ENSMUST00000172768 2147 ntAPPRIS ALT2 TSL 5 BASIC28.06■■■□□ 2.08
Smc5Q8CG46 Iscu-203ENSMUST00000112312 1116 ntTSL 5 BASIC28.05■■■□□ 2.08
Smc5Q8CG46 Gnl1-201ENSMUST00000087200 2848 ntAPPRIS P1 TSL 1 (best) BASIC28.05■■■□□ 2.08
Smc5Q8CG46 Nrxn1-213ENSMUST00000172466 2477 ntTSL 5 BASIC28.04■■■□□ 2.08
Smc5Q8CG46 Opn3-201ENSMUST00000027809 1913 ntAPPRIS P1 TSL 1 (best) BASIC28.04■■■□□ 2.08
Smc5Q8CG46 Rhbdl1-201ENSMUST00000026831 1711 ntAPPRIS P1 TSL 1 (best) BASIC28.04■■■□□ 2.08
Smc5Q8CG46 March9-201ENSMUST00000040307 3037 ntAPPRIS P1 TSL 1 (best) BASIC28.04■■■□□ 2.08
Smc5Q8CG46 Glrx2-205ENSMUST00000145571 758 ntTSL 2 BASIC28.04■■■□□ 2.08
Smc5Q8CG46 Ihh-201ENSMUST00000164097 2468 ntAPPRIS P1 TSL 1 (best) BASIC28.04■■■□□ 2.08
Smc5Q8CG46 Mtf2-202ENSMUST00000112626 1968 ntTSL 5 BASIC28.04■■■□□ 2.08
Smc5Q8CG46 Fbxl5-205ENSMUST00000121736 2144 ntTSL 1 (best) BASIC28.03■■■□□ 2.08
Smc5Q8CG46 Smarcad1-211ENSMUST00000204696 734 ntTSL 1 (best) BASIC28.03■■■□□ 2.08
Smc5Q8CG46 Syce2-202ENSMUST00000136026 1686 ntAPPRIS P3 TSL 1 (best) BASIC28.03■■■□□ 2.08
Smc5Q8CG46 Slc15a4-201ENSMUST00000031367 2732 ntAPPRIS P1 TSL 1 (best) BASIC28.03■■■□□ 2.08
Smc5Q8CG46 Gm26533-201ENSMUST00000180550 1790 ntTSL 1 (best) BASIC28.02■■■□□ 2.08
Smc5Q8CG46 Pax1-201ENSMUST00000109968 2643 ntAPPRIS P1 TSL 1 (best) BASIC28.02■■■□□ 2.08
Smc5Q8CG46 Cbln1-202ENSMUST00000169693 1699 ntAPPRIS P1 TSL 5 BASIC28.01■■■□□ 2.07
Smc5Q8CG46 Slc25a1-201ENSMUST00000003622 1678 ntAPPRIS P1 TSL 1 (best) BASIC28.01■■■□□ 2.07
Smc5Q8CG46 Fam89b-202ENSMUST00000116558 1189 ntTSL 1 (best) BASIC28.01■■■□□ 2.07
Smc5Q8CG46 Fam168b-201ENSMUST00000047534 5030 ntAPPRIS P1 TSL 1 (best) BASIC28.01■■■□□ 2.07
Smc5Q8CG46 Gm11542-201ENSMUST00000126480 1511 ntTSL 1 (best) BASIC28.01■■■□□ 2.07
Smc5Q8CG46 Sdccag3-201ENSMUST00000028293 2031 ntAPPRIS ALT2 TSL 1 (best) BASIC28.01■■■□□ 2.07
Smc5Q8CG46 Syt6-204ENSMUST00000118563 1843 ntTSL 1 (best) BASIC28■■■□□ 2.07
Smc5Q8CG46 Gm6934-201ENSMUST00000194780 1905 ntBASIC28■■■□□ 2.07
Smc5Q8CG46 Fancf-201ENSMUST00000169357 1691 ntAPPRIS P1 BASIC27.99■■■□□ 2.07
Smc5Q8CG46 Phf14-203ENSMUST00000115511 3336 ntAPPRIS P1 TSL 5 BASIC27.99■■■□□ 2.07
Smc5Q8CG46 Htra1-201ENSMUST00000006367 2041 ntAPPRIS P1 TSL 1 (best) BASIC27.99■■■□□ 2.07
Smc5Q8CG46 Sdccag3-204ENSMUST00000114102 2193 ntAPPRIS P3 TSL 1 (best) BASIC27.99■■■□□ 2.07
Smc5Q8CG46 A230087F16Rik-201ENSMUST00000181055 2098 ntTSL 1 (best) BASIC27.98■■■□□ 2.07
Smc5Q8CG46 2810459M11Rik-201ENSMUST00000027429 1225 ntAPPRIS ALT2 TSL 1 (best) BASIC27.98■■■□□ 2.07
Smc5Q8CG46 Pou2f2-204ENSMUST00000108416 1754 ntTSL 1 (best) BASIC27.98■■■□□ 2.07
Smc5Q8CG46 Tmed2-201ENSMUST00000060226 2074 ntAPPRIS P1 TSL 1 (best) BASIC27.98■■■□□ 2.07
Smc5Q8CG46 Azin2-202ENSMUST00000106068 2049 ntAPPRIS P1 TSL 5 BASIC27.97■■■□□ 2.07
Smc5Q8CG46 Dlx2-201ENSMUST00000024159 2473 ntAPPRIS P1 TSL 1 (best) BASIC27.97■■■□□ 2.07
Smc5Q8CG46 4933440N22Rik-202ENSMUST00000204444 1952 ntBASIC27.97■■■□□ 2.07
Smc5Q8CG46 Dync1i1-203ENSMUST00000115556 2718 ntTSL 1 (best) BASIC27.97■■■□□ 2.07
Smc5Q8CG46 Prr5-202ENSMUST00000171460 1719 ntAPPRIS ALT2 TSL 1 (best) BASIC27.97■■■□□ 2.07
Smc5Q8CG46 Dhrs13-201ENSMUST00000021187 1779 ntAPPRIS P1 TSL 1 (best) BASIC27.96■■■□□ 2.07
Smc5Q8CG46 Siah1b-202ENSMUST00000071667 1712 ntAPPRIS P1 TSL 1 (best) BASIC27.96■■■□□ 2.07
Smc5Q8CG46 Plpp2-204ENSMUST00000166804 1566 ntAPPRIS ALT2 TSL 1 (best) BASIC27.96■■■□□ 2.07
Smc5Q8CG46 Gskip-202ENSMUST00000222284 1064 ntTSL 1 (best) BASIC27.96■■■□□ 2.07
Smc5Q8CG46 Xbp1-201ENSMUST00000063084 2129 ntAPPRIS P2 TSL 1 (best) BASIC27.96■■■□□ 2.07
Smc5Q8CG46 Actr5-201ENSMUST00000045644 2402 ntAPPRIS P1 TSL 1 (best) BASIC27.96■■■□□ 2.07
Smc5Q8CG46 Phlda3-201ENSMUST00000038945 1435 ntAPPRIS P1 TSL 1 (best) BASIC27.95■■■□□ 2.07
Smc5Q8CG46 Nek6-202ENSMUST00000112895 1513 ntAPPRIS P1 TSL 1 (best) BASIC27.95■■■□□ 2.06
Smc5Q8CG46 Ubac1-201ENSMUST00000036509 1852 ntAPPRIS P2 TSL 1 (best) BASIC27.94■■■□□ 2.06
Smc5Q8CG46 Gimap1-205ENSMUST00000204168 1469 ntAPPRIS P1 TSL 1 (best) BASIC27.93■■■□□ 2.06
Smc5Q8CG46 Txnrd2-214ENSMUST00000205679 1866 ntTSL 5 BASIC27.93■■■□□ 2.06
Smc5Q8CG46 St7-209ENSMUST00000115420 2094 ntTSL 5 BASIC27.93■■■□□ 2.06
Smc5Q8CG46 Evx2-202ENSMUST00000173623 1428 ntAPPRIS P2 TSL 1 (best) BASIC27.92■■■□□ 2.06
Smc5Q8CG46 Hoxa11-201ENSMUST00000048026 2287 ntAPPRIS P1 TSL 1 (best) BASIC27.92■■■□□ 2.06
Smc5Q8CG46 Tceal5-201ENSMUST00000066819 1044 ntAPPRIS P1 TSL 1 (best) BASIC27.91■■■□□ 2.06
Smc5Q8CG46 Slc36a1-201ENSMUST00000020499 1950 ntAPPRIS P1 TSL 1 (best) BASIC27.91■■■□□ 2.06
Smc5Q8CG46 Dcaf15-201ENSMUST00000041367 2312 ntTSL 1 (best) BASIC27.91■■■□□ 2.06
Smc5Q8CG46 Gm9939-201ENSMUST00000067161 1154 ntBASIC27.9■■■□□ 2.06
Smc5Q8CG46 Ube2j2-205ENSMUST00000105583 1434 ntTSL 1 (best) BASIC27.9■■■□□ 2.06
Smc5Q8CG46 Nrarp-201ENSMUST00000104999 2582 ntAPPRIS P1 BASIC27.9■■■□□ 2.06
Smc5Q8CG46 Dmrt3-201ENSMUST00000048935 2390 ntAPPRIS P1 TSL 1 (best) BASIC27.89■■■□□ 2.06
Smc5Q8CG46 4932443I19Rik-201ENSMUST00000166277 799 ntAPPRIS P2 TSL 1 (best) BASIC27.89■■■□□ 2.06
Smc5Q8CG46 Otulin-201ENSMUST00000059662 1491 ntAPPRIS P1 TSL 1 (best) BASIC27.89■■■□□ 2.05
Smc5Q8CG46 Pitx2-202ENSMUST00000042587 2271 ntAPPRIS ALT1 TSL 1 (best) BASIC27.88■■■□□ 2.05
Smc5Q8CG46 Gm15156-201ENSMUST00000148217 417 ntTSL 3 BASIC27.88■■■□□ 2.05
Smc5Q8CG46 Notum-202ENSMUST00000106177 2212 ntAPPRIS P1 TSL 5 BASIC27.88■■■□□ 2.05
Smc5Q8CG46 Wtap-203ENSMUST00000159551 2060 ntAPPRIS P1 TSL 5 BASIC27.88■■■□□ 2.05
Smc5Q8CG46 Arhgap9-201ENSMUST00000069548 1782 ntAPPRIS P2 TSL 1 (best) BASIC27.88■■■□□ 2.05
Smc5Q8CG46 Kctd6-201ENSMUST00000022272 1650 ntAPPRIS P1 TSL 1 (best) BASIC27.87■■■□□ 2.05
Smc5Q8CG46 Chpt1-204ENSMUST00000117579 1043 ntAPPRIS ALT2 TSL 1 (best) BASIC27.87■■■□□ 2.05
Smc5Q8CG46 Gm12523-201ENSMUST00000148844 599 ntTSL 5 BASIC27.87■■■□□ 2.05
Smc5Q8CG46 Whrn-202ENSMUST00000063672 2804 ntTSL 1 (best) BASIC27.87■■■□□ 2.05
Smc5Q8CG46 Rab40b-201ENSMUST00000106107 1861 ntAPPRIS P1 TSL 1 (best) BASIC27.87■■■□□ 2.05
Smc5Q8CG46 Sdccag3-203ENSMUST00000114100 2099 ntAPPRIS ALT2 TSL 5 BASIC27.87■■■□□ 2.05
Smc5Q8CG46 AC164550.2-201ENSMUST00000219127 2086 ntTSL 5 BASIC27.87■■■□□ 2.05
Smc5Q8CG46 Emid1-208ENSMUST00000163299 1923 ntAPPRIS ALT2 TSL 5 BASIC27.86■■■□□ 2.05
Smc5Q8CG46 Hif1a-203ENSMUST00000110464 1759 ntTSL 1 (best) BASIC27.86■■■□□ 2.05
Smc5Q8CG46 Cacfd1-203ENSMUST00000114005 1286 ntTSL 1 (best) BASIC27.86■■■□□ 2.05
Smc5Q8CG46 Plpp5-201ENSMUST00000068916 1483 ntAPPRIS P1 TSL 1 (best) BASIC27.86■■■□□ 2.05
Smc5Q8CG46 Agps-202ENSMUST00000111952 2589 ntTSL 2 BASIC27.86■■■□□ 2.05
Smc5Q8CG46 Kcnj6-201ENSMUST00000095873 1773 ntTSL 1 (best) BASIC27.86■■■□□ 2.05
Smc5Q8CG46 Ppp4c-201ENSMUST00000032936 1359 ntAPPRIS P1 TSL 1 (best) BASIC27.86■■■□□ 2.05
Smc5Q8CG46 Pdpk1-203ENSMUST00000115407 1730 ntTSL 5 BASIC27.85■■■□□ 2.05
Smc5Q8CG46 Gm11529-201ENSMUST00000153012 639 ntTSL 1 (best) BASIC27.85■■■□□ 2.05
Smc5Q8CG46 Mageb3-201ENSMUST00000104936 2341 ntAPPRIS P1 BASIC27.85■■■□□ 2.05
Smc5Q8CG46 AC164433.2-201ENSMUST00000226346 1701 ntBASIC27.84■■■□□ 2.05
Smc5Q8CG46 Rhou-201ENSMUST00000045487 3371 ntAPPRIS P1 TSL 1 (best) BASIC27.84■■■□□ 2.05
Retrieved 100 of 76,532 protein–RNA pairs in 16.2 ms