Protein–RNA interactions for Protein: Q8CDV4

Trim52, Tripartite motif-containing 52, mousemouse

Predictions only

Length 233 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim52Q8CDV4 Rcan1-202ENSMUST00000060005 2324 ntTSL 1 (best) BASIC28.46■■■□□ 2.15
Trim52Q8CDV4 Bag1-203ENSMUST00000191273 1348 ntAPPRIS ALT2 TSL 1 (best) BASIC28.45■■■□□ 2.15
Trim52Q8CDV4 Gfra4-206ENSMUST00000110240 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC28.45■■■□□ 2.15
Trim52Q8CDV4 St7-205ENSMUST00000081635 2115 ntTSL 1 (best) BASIC28.45■■■□□ 2.15
Trim52Q8CDV4 Fus-201ENSMUST00000077609 1831 ntAPPRIS ALT2 TSL 1 (best) BASIC28.44■■■□□ 2.14
Trim52Q8CDV4 Dhrs11-201ENSMUST00000047560 1254 ntAPPRIS P1 TSL 1 (best) BASIC28.44■■■□□ 2.14
Trim52Q8CDV4 Ntn5-203ENSMUST00000183120 1491 ntTSL 1 (best) BASIC28.44■■■□□ 2.14
Trim52Q8CDV4 Sox3-201ENSMUST00000135107 2065 ntAPPRIS P1 BASIC28.44■■■□□ 2.14
Trim52Q8CDV4 Runx2-211ENSMUST00000162629 1607 ntAPPRIS ALT2 TSL 5 BASIC28.43■■■□□ 2.14
Trim52Q8CDV4 Fam50b-202ENSMUST00000221037 1345 ntAPPRIS P1 TSL 1 (best) BASIC28.43■■■□□ 2.14
Trim52Q8CDV4 2810002D19Rik-201ENSMUST00000152313 2040 ntTSL 1 (best) BASIC28.42■■■□□ 2.14
Trim52Q8CDV4 Mef2a-201ENSMUST00000032776 2476 ntAPPRIS P1 TSL 1 (best) BASIC28.42■■■□□ 2.14
Trim52Q8CDV4 Becn1-216ENSMUST00000170502 725 ntTSL 1 (best) BASIC28.42■■■□□ 2.14
Trim52Q8CDV4 Csrp1-201ENSMUST00000027677 1823 ntAPPRIS P1 TSL 1 (best) BASIC28.41■■■□□ 2.14
Trim52Q8CDV4 Csrp1-202ENSMUST00000097561 1828 ntAPPRIS P1 TSL 1 (best) BASIC28.41■■■□□ 2.14
Trim52Q8CDV4 Siah1a-201ENSMUST00000045296 1968 ntAPPRIS P1 TSL 1 (best) BASIC28.41■■■□□ 2.14
Trim52Q8CDV4 Arhgap9-203ENSMUST00000219026 1946 ntAPPRIS P2 TSL 1 (best) BASIC28.4■■■□□ 2.14
Trim52Q8CDV4 Fam89b-203ENSMUST00000161368 1160 ntTSL 1 (best) BASIC28.4■■■□□ 2.14
Trim52Q8CDV4 AC117769.4-201ENSMUST00000225679 685 ntBASIC28.4■■■□□ 2.14
Trim52Q8CDV4 Lsm4-201ENSMUST00000034311 925 ntAPPRIS P1 TSL 1 (best) BASIC28.4■■■□□ 2.14
Trim52Q8CDV4 Gm2415-202ENSMUST00000134688 401 ntTSL 2 BASIC28.39■■■□□ 2.14
Trim52Q8CDV4 Tmem42-201ENSMUST00000084733 1041 ntAPPRIS P1 TSL 1 (best) BASIC28.39■■■□□ 2.14
Trim52Q8CDV4 Cited4-201ENSMUST00000094814 1249 ntAPPRIS P1 BASIC28.39■■■□□ 2.14
Trim52Q8CDV4 Tmem235-201ENSMUST00000093905 1820 ntAPPRIS P1 TSL 5 BASIC28.39■■■□□ 2.13
Trim52Q8CDV4 Nrsn1-201ENSMUST00000057866 2222 ntAPPRIS P1 TSL 1 (best) BASIC28.38■■■□□ 2.13
Trim52Q8CDV4 H2-Q5-202ENSMUST00000172979 998 ntAPPRIS P1 TSL 5 BASIC28.38■■■□□ 2.13
Trim52Q8CDV4 Slc16a11-207ENSMUST00000136328 1403 ntTSL 5 BASIC28.37■■■□□ 2.13
Trim52Q8CDV4 Gm43592-201ENSMUST00000196922 1165 ntBASIC28.37■■■□□ 2.13
Trim52Q8CDV4 AC161180.1-201ENSMUST00000223439 933 ntAPPRIS P1 BASIC28.37■■■□□ 2.13
Trim52Q8CDV4 Gm5812-201ENSMUST00000061073 957 ntBASIC28.37■■■□□ 2.13
Trim52Q8CDV4 Olfm2-203ENSMUST00000215999 1895 ntAPPRIS ALT2 TSL 3 BASIC28.35■■■□□ 2.13
Trim52Q8CDV4 Gm10499-202ENSMUST00000174778 1698 ntTSL 1 (best) BASIC28.35■■■□□ 2.13
Trim52Q8CDV4 Actr3b-202ENSMUST00000128727 2031 ntTSL 1 (best) BASIC28.35■■■□□ 2.13
Trim52Q8CDV4 Snx21-203ENSMUST00000152471 1243 ntTSL 1 (best) BASIC28.34■■■□□ 2.13
Trim52Q8CDV4 Tmem127-202ENSMUST00000174288 842 ntTSL 2 BASIC28.34■■■□□ 2.13
Trim52Q8CDV4 Dapk2-201ENSMUST00000034944 1772 ntAPPRIS P1 TSL 1 (best) BASIC28.34■■■□□ 2.13
Trim52Q8CDV4 Rasgef1c-203ENSMUST00000093142 2216 ntAPPRIS P3 TSL 1 (best) BASIC28.34■■■□□ 2.13
Trim52Q8CDV4 Dusp2-201ENSMUST00000028846 1617 ntAPPRIS P1 TSL 1 (best) BASIC28.33■■■□□ 2.13
Trim52Q8CDV4 Eif5a-208ENSMUST00000108611 1353 ntAPPRIS P1 TSL 1 (best) BASIC28.33■■■□□ 2.13
Trim52Q8CDV4 Fgf16-201ENSMUST00000033581 1645 ntAPPRIS P1 TSL 1 (best) BASIC28.32■■■□□ 2.12
Trim52Q8CDV4 Slc44a1-203ENSMUST00000107646 1974 ntTSL 5 BASIC28.32■■■□□ 2.12
Trim52Q8CDV4 Hopx-203ENSMUST00000120827 1217 ntAPPRIS P1 TSL 1 (best) BASIC28.32■■■□□ 2.12
Trim52Q8CDV4 Sox17-202ENSMUST00000116652 1512 ntAPPRIS P1 TSL 1 (best) BASIC28.32■■■□□ 2.12
Trim52Q8CDV4 Prph-202ENSMUST00000047104 1865 ntAPPRIS P3 TSL 1 (best) BASIC28.32■■■□□ 2.12
Trim52Q8CDV4 Plekha3-201ENSMUST00000111920 2534 ntAPPRIS P1 TSL 1 (best) BASIC28.31■■■□□ 2.12
Trim52Q8CDV4 Dexi-201ENSMUST00000038281 1389 ntAPPRIS P1 TSL 1 (best) BASIC28.31■■■□□ 2.12
Trim52Q8CDV4 Mpnd-208ENSMUST00000159996 1444 ntAPPRIS ALT2 TSL 5 BASIC28.31■■■□□ 2.12
Trim52Q8CDV4 Srd5a3-201ENSMUST00000031143 1747 ntAPPRIS P2 TSL 1 (best) BASIC28.29■■■□□ 2.12
Trim52Q8CDV4 Ctbp1-211ENSMUST00000202868 2436 ntAPPRIS ALT1 TSL 1 (best) BASIC28.29■■■□□ 2.12
Trim52Q8CDV4 Dynll1-202ENSMUST00000112090 729 ntAPPRIS P1 TSL 2 BASIC28.29■■■□□ 2.12
Trim52Q8CDV4 Sec24d-208ENSMUST00000200333 307 ntTSL 1 (best) BASIC28.29■■■□□ 2.12
Trim52Q8CDV4 Coprs-201ENSMUST00000033839 793 ntAPPRIS P1 TSL 1 (best) BASIC28.29■■■□□ 2.12
Trim52Q8CDV4 Rcor2-201ENSMUST00000066646 2801 ntAPPRIS P1 TSL 1 (best) BASIC28.29■■■□□ 2.12
Trim52Q8CDV4 Fam220a-201ENSMUST00000067145 2198 ntAPPRIS P1 TSL 1 (best) BASIC28.28■■■□□ 2.12
Trim52Q8CDV4 Gm38287-201ENSMUST00000195193 2051 ntTSL 3 BASIC28.28■■■□□ 2.12
Trim52Q8CDV4 Gsc2-201ENSMUST00000012279 1172 ntAPPRIS P1 TSL 1 (best) BASIC28.28■■■□□ 2.12
Trim52Q8CDV4 Gm12905-201ENSMUST00000153814 658 ntTSL 2 BASIC28.28■■■□□ 2.12
Trim52Q8CDV4 Cldnd1-204ENSMUST00000162057 1540 ntAPPRIS P1 TSL 5 BASIC28.28■■■□□ 2.12
Trim52Q8CDV4 Susd3-203ENSMUST00000119721 1249 ntAPPRIS ALT2 TSL 1 (best) BASIC28.27■■■□□ 2.12
Trim52Q8CDV4 AC166358.2-201ENSMUST00000223403 734 ntTSL 5 BASIC28.27■■■□□ 2.12
Trim52Q8CDV4 Terf2-203ENSMUST00000116425 2471 ntTSL 1 (best) BASIC28.27■■■□□ 2.12
Trim52Q8CDV4 Sin3b-202ENSMUST00000109950 1024 ntTSL 1 (best) BASIC28.26■■■□□ 2.11
Trim52Q8CDV4 Gm29735-201ENSMUST00000209599 660 ntAPPRIS P1 BASIC28.26■■■□□ 2.11
Trim52Q8CDV4 A430027H14Rik-201ENSMUST00000191809 1467 ntBASIC28.26■■■□□ 2.11
Trim52Q8CDV4 AC164433.2-201ENSMUST00000226346 1701 ntBASIC28.26■■■□□ 2.11
Trim52Q8CDV4 Ube2k-206ENSMUST00000201984 1449 ntTSL 3 BASIC28.26■■■□□ 2.11
Trim52Q8CDV4 Zfp422-201ENSMUST00000057540 2375 ntAPPRIS P1 TSL 1 (best) BASIC28.25■■■□□ 2.11
Trim52Q8CDV4 Prr5-202ENSMUST00000171460 1719 ntAPPRIS ALT2 TSL 1 (best) BASIC28.24■■■□□ 2.11
Trim52Q8CDV4 Cln6-201ENSMUST00000034776 2142 ntAPPRIS P1 TSL 1 (best) BASIC28.24■■■□□ 2.11
Trim52Q8CDV4 Dbndd2-202ENSMUST00000069385 1658 ntAPPRIS P1 TSL 1 (best) BASIC28.24■■■□□ 2.11
Trim52Q8CDV4 Tmem150a-202ENSMUST00000132243 1478 ntTSL 5 BASIC28.23■■■□□ 2.11
Trim52Q8CDV4 Rab40c-209ENSMUST00000179998 2456 ntAPPRIS P1 TSL 5 BASIC28.23■■■□□ 2.11
Trim52Q8CDV4 Adat3-204ENSMUST00000038411 1411 ntAPPRIS P1 TSL 2 BASIC28.23■■■□□ 2.11
Trim52Q8CDV4 Tbc1d10a-206ENSMUST00000180088 1921 ntAPPRIS P2 TSL 1 (best) BASIC28.23■■■□□ 2.11
Trim52Q8CDV4 Jdp2-201ENSMUST00000050687 1643 ntAPPRIS P1 TSL 1 (best) BASIC28.22■■■□□ 2.11
Trim52Q8CDV4 Rnf115-201ENSMUST00000029740 2209 ntAPPRIS P1 TSL 1 (best) BASIC28.22■■■□□ 2.11
Trim52Q8CDV4 Faim-202ENSMUST00000112911 803 ntAPPRIS ALT1 TSL 2 BASIC28.22■■■□□ 2.11
Trim52Q8CDV4 Arhgap39-204ENSMUST00000176219 542 ntTSL 5 BASIC28.22■■■□□ 2.11
Trim52Q8CDV4 Gm7544-201ENSMUST00000222426 828 ntAPPRIS P1 BASIC28.22■■■□□ 2.11
Trim52Q8CDV4 Spryd7-202ENSMUST00000100496 1459 ntTSL 1 (best) BASIC28.21■■■□□ 2.11
Trim52Q8CDV4 March5-202ENSMUST00000112391 1293 ntTSL 1 (best) BASIC28.21■■■□□ 2.11
Trim52Q8CDV4 Gm13238-201ENSMUST00000117655 780 ntBASIC28.21■■■□□ 2.11
Trim52Q8CDV4 Btg3-201ENSMUST00000023570 1414 ntAPPRIS P1 TSL 1 (best) BASIC28.2■■■□□ 2.11
Trim52Q8CDV4 Hras-202ENSMUST00000097957 1199 ntAPPRIS P1 TSL 2 BASIC28.2■■■□□ 2.1
Trim52Q8CDV4 Dnajc21-201ENSMUST00000136591 2060 ntAPPRIS P1 TSL 5 BASIC28.2■■■□□ 2.1
Trim52Q8CDV4 Cckbr-202ENSMUST00000181339 1326 ntTSL 1 (best) BASIC28.19■■■□□ 2.1
Trim52Q8CDV4 Pdgfa-204ENSMUST00000110897 1287 ntAPPRIS P1 TSL 5 BASIC28.19■■■□□ 2.1
Trim52Q8CDV4 Gm7199-201ENSMUST00000118327 1485 ntBASIC28.19■■■□□ 2.1
Trim52Q8CDV4 Gng12-203ENSMUST00000114224 680 ntAPPRIS P1 TSL 3 BASIC28.18■■■□□ 2.1
Trim52Q8CDV4 Gng12-206ENSMUST00000114227 1125 ntAPPRIS P1 TSL 1 (best) BASIC28.18■■■□□ 2.1
Trim52Q8CDV4 Rnf39-201ENSMUST00000040498 1579 ntAPPRIS P1 TSL 1 (best) BASIC28.18■■■□□ 2.1
Trim52Q8CDV4 Cmas-201ENSMUST00000032419 1760 ntAPPRIS P1 TSL 1 (best) BASIC28.18■■■□□ 2.1
Trim52Q8CDV4 Slc25a33-201ENSMUST00000105686 1887 ntAPPRIS P1 TSL 1 (best) BASIC28.18■■■□□ 2.1
Trim52Q8CDV4 Ttc9-201ENSMUST00000036116 2042 ntAPPRIS P1 TSL 1 (best) BASIC28.18■■■□□ 2.1
Trim52Q8CDV4 6430628N08Rik-202ENSMUST00000165938 1602 ntTSL 5 BASIC28.18■■■□□ 2.1
Trim52Q8CDV4 Mxra7-201ENSMUST00000021170 2063 ntAPPRIS P3 TSL 1 (best) BASIC28.17■■■□□ 2.1
Trim52Q8CDV4 Xkr7-201ENSMUST00000037235 2711 ntAPPRIS P1 TSL 1 (best) BASIC28.17■■■□□ 2.1
Trim52Q8CDV4 Ppia-202ENSMUST00000132846 1170 ntAPPRIS P1 TSL 1 (best) BASIC28.17■■■□□ 2.1
Trim52Q8CDV4 Nsd1-203ENSMUST00000224156 1149 ntBASIC28.17■■■□□ 2.1
Trim52Q8CDV4 Timm50-201ENSMUST00000081946 1515 ntAPPRIS P1 TSL 1 (best) BASIC28.17■■■□□ 2.1
Retrieved 100 of 76,532 protein–RNA pairs in 23.6 ms