Protein–RNA interactions for Protein: Q8BR65

Suds3, Sin3 histone deacetylase corepressor complex component SDS3, mousemouse

Predictions only

Length 328 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Suds3Q8BR65 H2afy-202ENSMUST00000045788 1933 ntTSL 1 (best) BASIC22.82■■□□□ 1.24
Suds3Q8BR65 Azin2-202ENSMUST00000106068 2049 ntAPPRIS P1 TSL 5 BASIC22.82■■□□□ 1.24
Suds3Q8BR65 Glrx3-201ENSMUST00000064404 1685 ntAPPRIS P2 TSL 1 (best) BASIC22.82■■□□□ 1.24
Suds3Q8BR65 Rasgef1c-203ENSMUST00000093142 2216 ntAPPRIS P3 TSL 1 (best) BASIC22.82■■□□□ 1.24
Suds3Q8BR65 A230020J21Rik-202ENSMUST00000192407 1649 ntTSL 2 BASIC22.82■■□□□ 1.24
Suds3Q8BR65 Npas1-201ENSMUST00000002053 2091 ntAPPRIS P1 TSL 5 BASIC22.81■■□□□ 1.24
Suds3Q8BR65 Gm4419-202ENSMUST00000226239 1431 ntBASIC22.81■■□□□ 1.24
Suds3Q8BR65 E130309D02Rik-201ENSMUST00000046418 2208 ntAPPRIS P1 TSL 1 (best) BASIC22.81■■□□□ 1.24
Suds3Q8BR65 Foxa2-202ENSMUST00000109964 2070 ntAPPRIS ALT2 TSL 1 (best) BASIC22.8■■□□□ 1.24
Suds3Q8BR65 Ubp1-204ENSMUST00000214095 2320 ntAPPRIS ALT1 TSL 1 (best) BASIC22.8■■□□□ 1.24
Suds3Q8BR65 Mrps15-201ENSMUST00000030675 937 ntAPPRIS P1 TSL 1 (best) BASIC22.8■■□□□ 1.24
Suds3Q8BR65 Gjd3-201ENSMUST00000062931 837 ntAPPRIS P1 BASIC22.8■■□□□ 1.24
Suds3Q8BR65 Wnt2-201ENSMUST00000010941 2255 ntAPPRIS P1 TSL 1 (best) BASIC22.8■■□□□ 1.24
Suds3Q8BR65 Tbc1d24-201ENSMUST00000024931 4894 ntAPPRIS P1 TSL 1 (best) BASIC22.8■■□□□ 1.24
Suds3Q8BR65 Ctage5-218ENSMUST00000177162 2728 ntTSL 5 BASIC22.8■■□□□ 1.24
Suds3Q8BR65 Artn-201ENSMUST00000070816 2177 ntAPPRIS P1 TSL 1 (best) BASIC22.79■■□□□ 1.24
Suds3Q8BR65 Dnajc21-201ENSMUST00000136591 2060 ntAPPRIS P1 TSL 5 BASIC22.79■■□□□ 1.24
Suds3Q8BR65 Gm10499-202ENSMUST00000174778 1698 ntTSL 1 (best) BASIC22.79■■□□□ 1.24
Suds3Q8BR65 Izumo4-205ENSMUST00000218184 1196 ntAPPRIS P1 TSL 2 BASIC22.79■■□□□ 1.24
Suds3Q8BR65 Rp9-201ENSMUST00000034763 1134 ntAPPRIS P2 TSL 1 (best) BASIC22.79■■□□□ 1.24
Suds3Q8BR65 Rundc3b-202ENSMUST00000115378 1891 ntAPPRIS ALT2 TSL 5 BASIC22.79■■□□□ 1.24
Suds3Q8BR65 Gm26533-201ENSMUST00000180550 1790 ntTSL 1 (best) BASIC22.78■■□□□ 1.24
Suds3Q8BR65 Atp5j-201ENSMUST00000023608 809 ntAPPRIS P1 TSL 1 (best) BASIC22.78■■□□□ 1.24
Suds3Q8BR65 Acvr2b-201ENSMUST00000035093 1729 ntTSL 5 BASIC22.78■■□□□ 1.24
Suds3Q8BR65 Jmjd6-201ENSMUST00000047616 1668 ntAPPRIS P1 TSL 1 (best) BASIC22.77■■□□□ 1.24
Suds3Q8BR65 Paqr6-203ENSMUST00000147948 837 ntTSL 2 BASIC22.77■■□□□ 1.24
Suds3Q8BR65 Prr5-201ENSMUST00000065499 1830 ntAPPRIS P3 TSL 1 (best) BASIC22.77■■□□□ 1.24
Suds3Q8BR65 Eif3j2-201ENSMUST00000057110 2379 ntAPPRIS P1 BASIC22.77■■□□□ 1.24
Suds3Q8BR65 Dedd-204ENSMUST00000111300 2563 ntAPPRIS P1 TSL 1 (best) BASIC22.77■■□□□ 1.24
Suds3Q8BR65 Frmd4a-201ENSMUST00000075767 6761 ntAPPRIS ALT2 TSL 1 (best) BASIC22.77■■□□□ 1.23
Suds3Q8BR65 Kcnc3-201ENSMUST00000107906 5062 ntAPPRIS ALT2 TSL 1 (best) BASIC22.76■■□□□ 1.23
Suds3Q8BR65 Nrsn1-201ENSMUST00000057866 2222 ntAPPRIS P1 TSL 1 (best) BASIC22.76■■□□□ 1.23
Suds3Q8BR65 Dyrk1b-201ENSMUST00000085901 2534 ntAPPRIS P3 TSL 1 (best) BASIC22.75■■□□□ 1.23
Suds3Q8BR65 Gm26917-201ENSMUST00000182520 869 ntTSL 5 BASIC22.75■■□□□ 1.23
Suds3Q8BR65 E130304I02Rik-202ENSMUST00000187873 696 ntTSL 1 (best) BASIC22.75■■□□□ 1.23
Suds3Q8BR65 Mir3960-201ENSMUST00000198213 73 ntBASIC22.75■■□□□ 1.23
Suds3Q8BR65 Ccsap-202ENSMUST00000122421 2673 ntAPPRIS P1 TSL 1 (best) BASIC22.75■■□□□ 1.23
Suds3Q8BR65 Dync1i1-203ENSMUST00000115556 2718 ntTSL 1 (best) BASIC22.75■■□□□ 1.23
Suds3Q8BR65 Agap2-201ENSMUST00000039259 5633 ntAPPRIS P2 TSL 1 (best) BASIC22.74■■□□□ 1.23
Suds3Q8BR65 Scarna2-201ENSMUST00000157560 414 ntBASIC22.74■■□□□ 1.23
Suds3Q8BR65 Plpp2-204ENSMUST00000166804 1566 ntAPPRIS ALT2 TSL 1 (best) BASIC22.74■■□□□ 1.23
Suds3Q8BR65 Gm11613-201ENSMUST00000134427 1971 ntTSL 1 (best) BASIC22.74■■□□□ 1.23
Suds3Q8BR65 Ltb4r1-201ENSMUST00000057569 1394 ntAPPRIS P1 TSL 1 (best) BASIC22.74■■□□□ 1.23
Suds3Q8BR65 D130020L05Rik-201ENSMUST00000180800 2431 ntTSL 1 (best) BASIC22.73■■□□□ 1.23
Suds3Q8BR65 Cacna2d2-205ENSMUST00000168532 5807 ntAPPRIS ALT2 TSL 1 (best) BASIC22.73■■□□□ 1.23
Suds3Q8BR65 Wnt5b-203ENSMUST00000119369 2339 ntTSL 1 (best) BASIC22.73■■□□□ 1.23
Suds3Q8BR65 Iglon5-201ENSMUST00000107974 2622 ntAPPRIS P1 TSL 1 (best) BASIC22.73■■□□□ 1.23
Suds3Q8BR65 Homer3-206ENSMUST00000140212 2608 ntAPPRIS P3 TSL 1 (best) BASIC22.73■■□□□ 1.23
Suds3Q8BR65 Larp4b-204ENSMUST00000188939 2658 ntTSL 1 (best) BASIC22.73■■□□□ 1.23
Suds3Q8BR65 Mprip-202ENSMUST00000072031 8718 ntAPPRIS P4 TSL 1 (best) BASIC22.73■■□□□ 1.23
Suds3Q8BR65 Sh3d21-202ENSMUST00000097891 2384 ntAPPRIS P1 TSL 1 (best) BASIC22.72■■□□□ 1.23
Suds3Q8BR65 Ybx3-202ENSMUST00000087865 1684 ntAPPRIS ALT2 TSL 1 (best) BASIC22.72■■□□□ 1.23
Suds3Q8BR65 Thap4-206ENSMUST00000190116 5558 ntAPPRIS P1 TSL 1 (best) BASIC22.72■■□□□ 1.23
Suds3Q8BR65 Dnajc19-202ENSMUST00000108195 659 ntAPPRIS P1 TSL 1 (best) BASIC22.72■■□□□ 1.23
Suds3Q8BR65 Pkd1-207ENSMUST00000228550 1050 ntBASIC22.72■■□□□ 1.23
Suds3Q8BR65 Fbl-201ENSMUST00000042405 1197 ntAPPRIS P1 TSL 1 (best) BASIC22.72■■□□□ 1.23
Suds3Q8BR65 Hs3st6-201ENSMUST00000044922 1219 ntAPPRIS P1 TSL 1 (best) BASIC22.72■■□□□ 1.23
Suds3Q8BR65 Tcf4-246ENSMUST00000202116 2986 ntTSL 1 (best) BASIC22.71■■□□□ 1.23
Suds3Q8BR65 Cnep1r1-201ENSMUST00000095214 1731 ntAPPRIS P1 TSL 1 (best) BASIC22.71■■□□□ 1.23
Suds3Q8BR65 Srarp-201ENSMUST00000094544 905 ntAPPRIS P1 TSL 1 (best) BASIC22.71■■□□□ 1.23
Suds3Q8BR65 Tbr1-202ENSMUST00000102737 1406 ntTSL 2 BASIC22.71■■□□□ 1.23
Suds3Q8BR65 Efhd2-201ENSMUST00000036854 2381 ntAPPRIS P1 TSL 1 (best) BASIC22.71■■□□□ 1.23
Suds3Q8BR65 Osbpl10-207ENSMUST00000183104 2477 ntAPPRIS P1 TSL 5 BASIC22.71■■□□□ 1.23
Suds3Q8BR65 Tmem70-203ENSMUST00000177501 1636 ntAPPRIS P3 TSL 1 (best) BASIC22.71■■□□□ 1.23
Suds3Q8BR65 Hoxc8-201ENSMUST00000001703 1868 ntAPPRIS P1 TSL 1 (best) BASIC22.71■■□□□ 1.23
Suds3Q8BR65 Mapk1-201ENSMUST00000023462 2390 ntAPPRIS P1 TSL 1 (best) BASIC22.7■■□□□ 1.22
Suds3Q8BR65 Rpl38-203ENSMUST00000106599 457 ntAPPRIS P1 TSL 1 (best) BASIC22.7■■□□□ 1.22
Suds3Q8BR65 Gm45364-201ENSMUST00000210883 159 ntBASIC22.7■■□□□ 1.22
Suds3Q8BR65 Slc44a1-203ENSMUST00000107646 1974 ntTSL 5 BASIC22.69■■□□□ 1.22
Suds3Q8BR65 Gm13889-201ENSMUST00000099689 1386 ntBASIC22.69■■□□□ 1.22
Suds3Q8BR65 St6galnac6-203ENSMUST00000095044 2394 ntAPPRIS P3 TSL 1 (best) BASIC22.69■■□□□ 1.22
Suds3Q8BR65 2610307P16Rik-205ENSMUST00000148885 1870 ntTSL 1 (best) BASIC22.68■■□□□ 1.22
Suds3Q8BR65 AC154454.1-201ENSMUST00000225253 216 ntBASIC22.68■■□□□ 1.22
Suds3Q8BR65 Tmem9b-201ENSMUST00000033333 1703 ntAPPRIS P2 TSL 1 (best) BASIC22.68■■□□□ 1.22
Suds3Q8BR65 BC005561-201ENSMUST00000096452 5409 ntAPPRIS P1 TSL 2 BASIC22.68■■□□□ 1.22
Suds3Q8BR65 A030005K14Rik-201ENSMUST00000193762 1093 ntAPPRIS P1 BASIC22.67■■□□□ 1.22
Suds3Q8BR65 Gm40983-202ENSMUST00000222598 1198 ntTSL 5 BASIC22.67■■□□□ 1.22
Suds3Q8BR65 Gas1-202ENSMUST00000223933 1155 ntAPPRIS P2 BASIC22.67■■□□□ 1.22
Suds3Q8BR65 Gm16437-201ENSMUST00000025669 507 ntBASIC22.67■■□□□ 1.22
Suds3Q8BR65 Card19-201ENSMUST00000048946 804 ntAPPRIS P1 TSL 1 (best) BASIC22.67■■□□□ 1.22
Suds3Q8BR65 Il17rd-202ENSMUST00000223942 2186 ntBASIC22.67■■□□□ 1.22
Suds3Q8BR65 Map2k7-201ENSMUST00000003027 1626 ntTSL 1 (best) BASIC22.67■■□□□ 1.22
Suds3Q8BR65 Ppp4c-201ENSMUST00000032936 1359 ntAPPRIS P1 TSL 1 (best) BASIC22.66■■□□□ 1.22
Suds3Q8BR65 Mir6538-201ENSMUST00000183713 110 ntBASIC22.66■■□□□ 1.22
Suds3Q8BR65 Pou6f1-202ENSMUST00000073837 4953 ntTSL 1 (best) BASIC22.66■■□□□ 1.22
Suds3Q8BR65 A330041J22Rik-201ENSMUST00000150367 1825 ntTSL 1 (best) BASIC22.66■■□□□ 1.22
Suds3Q8BR65 Htra3-201ENSMUST00000087629 2750 ntAPPRIS P1 TSL 1 (best) BASIC22.66■■□□□ 1.22
Suds3Q8BR65 Coro1b-201ENSMUST00000008893 1888 ntAPPRIS P1 TSL 1 (best) BASIC22.65■■□□□ 1.22
Suds3Q8BR65 Nisch-201ENSMUST00000022469 5559 ntAPPRIS P3 TSL 2 BASIC22.65■■□□□ 1.22
Suds3Q8BR65 Gm9888-201ENSMUST00000150678 965 ntTSL 1 (best) BASIC22.65■■□□□ 1.22
Suds3Q8BR65 2510046G10Rik-202ENSMUST00000187458 1052 ntBASIC22.65■■□□□ 1.22
Suds3Q8BR65 Agap2-202ENSMUST00000217941 5573 ntAPPRIS ALT2 TSL 1 (best) BASIC22.65■■□□□ 1.22
Suds3Q8BR65 Rbm45-201ENSMUST00000046389 1898 ntAPPRIS P1 TSL 1 (best) BASIC22.64■■□□□ 1.22
Suds3Q8BR65 Crlf2-201ENSMUST00000044579 1323 ntAPPRIS P3 TSL 1 (best) BASIC22.64■■□□□ 1.22
Suds3Q8BR65 Dcun1d5-201ENSMUST00000034499 1122 ntTSL 1 (best) BASIC22.64■■□□□ 1.21
Suds3Q8BR65 Gm9806-201ENSMUST00000051080 552 ntBASIC22.64■■□□□ 1.21
Suds3Q8BR65 Tmem192-202ENSMUST00000079896 916 ntTSL 1 (best) BASIC22.64■■□□□ 1.21
Suds3Q8BR65 Stambp-207ENSMUST00000206592 2152 ntAPPRIS P1 TSL 1 (best) BASIC22.64■■□□□ 1.21
Suds3Q8BR65 Elf2-203ENSMUST00000108051 2514 ntTSL 1 (best) BASIC22.64■■□□□ 1.21
Suds3Q8BR65 Rarres1-201ENSMUST00000054825 1325 ntAPPRIS P1 TSL 1 (best) BASIC22.63■■□□□ 1.21
Retrieved 100 of 76,532 protein–RNA pairs in 135.5 ms