Protein–RNA interactions for Protein: Q8BL00

Cdhr3, Cadherin-related family member 3, mousemouse

Predictions only

Length 831 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdhr3Q8BL00 Usp21-203ENSMUST00000111306 2185 ntAPPRIS ALT1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Cdhr3Q8BL00 Mapk15-201ENSMUST00000089669 1929 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Cdhr3Q8BL00 Olfm2-203ENSMUST00000215999 1895 ntAPPRIS ALT2 TSL 3 BASIC19.63■□□□□ 0.73
Cdhr3Q8BL00 Prph-201ENSMUST00000024249 1769 ntAPPRIS ALT2 TSL 1 (best) BASIC19.63■□□□□ 0.73
Cdhr3Q8BL00 Kat2b-201ENSMUST00000000724 4653 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Cdhr3Q8BL00 Habp4-201ENSMUST00000021929 2564 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Cdhr3Q8BL00 Asf1a-201ENSMUST00000020004 2201 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Cdhr3Q8BL00 Otud5-204ENSMUST00000115667 2708 ntAPPRIS ALT2 TSL 5 BASIC19.62■□□□□ 0.73
Cdhr3Q8BL00 Brf1-201ENSMUST00000011302 2615 ntAPPRIS P1 TSL 5 BASIC19.62■□□□□ 0.73
Cdhr3Q8BL00 Homer3-206ENSMUST00000140212 2608 ntAPPRIS P3 TSL 1 (best) BASIC19.62■□□□□ 0.73
Cdhr3Q8BL00 Hook1-201ENSMUST00000030306 5517 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Cdhr3Q8BL00 Fam89b-202ENSMUST00000116558 1189 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
Cdhr3Q8BL00 Phactr2-202ENSMUST00000105543 2735 ntAPPRIS P2 TSL 1 (best) BASIC19.61■□□□□ 0.73
Cdhr3Q8BL00 Krt10-201ENSMUST00000103131 2094 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Cdhr3Q8BL00 Zgpat-202ENSMUST00000108807 2072 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Cdhr3Q8BL00 Mef2a-203ENSMUST00000076325 2664 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Cdhr3Q8BL00 Phf14-203ENSMUST00000115511 3336 ntAPPRIS P1 TSL 5 BASIC19.61■□□□□ 0.73
Cdhr3Q8BL00 Hexdc-201ENSMUST00000038831 2378 ntAPPRIS ALT2 TSL 5 BASIC19.61■□□□□ 0.73
Cdhr3Q8BL00 P4ha3-201ENSMUST00000057023 2361 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Cdhr3Q8BL00 Bag2-201ENSMUST00000044691 1860 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Cdhr3Q8BL00 Rbm45-201ENSMUST00000046389 1898 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Cdhr3Q8BL00 Rab3il1-202ENSMUST00000117641 2004 ntAPPRIS ALT2 TSL 1 (best) BASIC19.6■□□□□ 0.73
Cdhr3Q8BL00 Iscu-203ENSMUST00000112312 1116 ntTSL 5 BASIC19.6■□□□□ 0.73
Cdhr3Q8BL00 Ybx3-202ENSMUST00000087865 1684 ntAPPRIS ALT2 TSL 1 (best) BASIC19.59■□□□□ 0.73
Cdhr3Q8BL00 Atp5j-201ENSMUST00000023608 809 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Cdhr3Q8BL00 Ltk-205ENSMUST00000140224 2240 ntAPPRIS ALT2 TSL 1 (best) BASIC19.59■□□□□ 0.73
Cdhr3Q8BL00 Ltk-206ENSMUST00000182203 2232 ntAPPRIS ALT2 TSL 1 (best) BASIC19.59■□□□□ 0.73
Cdhr3Q8BL00 Terf2-202ENSMUST00000068421 2667 ntAPPRIS ALT2 TSL 5 BASIC19.59■□□□□ 0.73
Cdhr3Q8BL00 Gm20208-202ENSMUST00000219905 1528 ntTSL 1 (best) BASIC19.58■□□□□ 0.73
Cdhr3Q8BL00 Smarcad1-211ENSMUST00000204696 734 ntTSL 1 (best) BASIC19.58■□□□□ 0.72
Cdhr3Q8BL00 Rmnd5a-201ENSMUST00000002292 6165 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
Cdhr3Q8BL00 Chst14-201ENSMUST00000099546 2090 ntAPPRIS P1 BASIC19.58■□□□□ 0.72
Cdhr3Q8BL00 Apcdd1-201ENSMUST00000096554 2799 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Cdhr3Q8BL00 Pde6d-201ENSMUST00000027444 1159 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Cdhr3Q8BL00 Dyrk1b-202ENSMUST00000172467 2523 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
Cdhr3Q8BL00 Dyrk1b-201ENSMUST00000085901 2534 ntAPPRIS P3 TSL 1 (best) BASIC19.57■□□□□ 0.72
Cdhr3Q8BL00 Grin2d-201ENSMUST00000002848 5431 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Cdhr3Q8BL00 Msl1-203ENSMUST00000107485 2091 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
Cdhr3Q8BL00 Mnx1-202ENSMUST00000165512 2245 ntAPPRIS P2 TSL 1 (best) BASIC19.56■□□□□ 0.72
Cdhr3Q8BL00 Lrp2-202ENSMUST00000092551 2228 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
Cdhr3Q8BL00 Triobp-201ENSMUST00000109687 2570 ntAPPRIS ALT2 TSL 1 (best) BASIC19.56■□□□□ 0.72
Cdhr3Q8BL00 Kmt5a-201ENSMUST00000059580 2739 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Cdhr3Q8BL00 Glrx2-205ENSMUST00000145571 758 ntTSL 2 BASIC19.56■□□□□ 0.72
Cdhr3Q8BL00 Pan3-201ENSMUST00000031651 5048 ntAPPRIS P2 TSL 5 BASIC19.56■□□□□ 0.72
Cdhr3Q8BL00 Tmem98-201ENSMUST00000040865 1633 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Cdhr3Q8BL00 Gm26533-201ENSMUST00000180550 1790 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
Cdhr3Q8BL00 Fcho2-201ENSMUST00000040340 5122 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Cdhr3Q8BL00 March9-201ENSMUST00000040307 3037 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Cdhr3Q8BL00 Dhrs13os-201ENSMUST00000150471 2429 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
Cdhr3Q8BL00 P4htm-201ENSMUST00000006853 1841 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Cdhr3Q8BL00 Gskip-202ENSMUST00000222284 1064 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
Cdhr3Q8BL00 Fam168b-203ENSMUST00000167518 5058 ntTSL 5 BASIC19.54■□□□□ 0.72
Cdhr3Q8BL00 AC061963.1-201ENSMUST00000213180 1765 ntTSL 5 BASIC19.54■□□□□ 0.72
Cdhr3Q8BL00 Kcnk2-205ENSMUST00000192723 1642 ntAPPRIS ALT1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Cdhr3Q8BL00 Banp-202ENSMUST00000093078 2289 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
Cdhr3Q8BL00 Susd6-203ENSMUST00000220238 2127 ntAPPRIS ALT2 TSL 1 (best) BASIC19.54■□□□□ 0.72
Cdhr3Q8BL00 Rhou-201ENSMUST00000045487 3371 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Cdhr3Q8BL00 2810459M11Rik-201ENSMUST00000027429 1225 ntAPPRIS ALT2 TSL 1 (best) BASIC19.53■□□□□ 0.72
Cdhr3Q8BL00 Zfp513-201ENSMUST00000031562 2213 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
Cdhr3Q8BL00 Ing2-201ENSMUST00000080353 2812 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
Cdhr3Q8BL00 Antxr1-204ENSMUST00000204805 2156 ntAPPRIS ALT2 TSL 5 BASIC19.52■□□□□ 0.72
Cdhr3Q8BL00 Dgat2-201ENSMUST00000033001 2262 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
Cdhr3Q8BL00 Msl2-202ENSMUST00000189616 2612 ntTSL 5 BASIC19.51■□□□□ 0.71
Cdhr3Q8BL00 Gm12523-201ENSMUST00000148844 599 ntTSL 5 BASIC19.51■□□□□ 0.71
Cdhr3Q8BL00 Gm9939-201ENSMUST00000067161 1154 ntBASIC19.51■□□□□ 0.71
Cdhr3Q8BL00 Plpp2-204ENSMUST00000166804 1566 ntAPPRIS ALT2 TSL 1 (best) BASIC19.51■□□□□ 0.71
Cdhr3Q8BL00 Syce2-202ENSMUST00000136026 1686 ntAPPRIS P3 TSL 1 (best) BASIC19.51■□□□□ 0.71
Cdhr3Q8BL00 Mlx-201ENSMUST00000017945 1965 ntAPPRIS P3 TSL 1 (best) BASIC19.51■□□□□ 0.71
Cdhr3Q8BL00 Rfx5-204ENSMUST00000107255 2350 ntAPPRIS P1 TSL 5 BASIC19.51■□□□□ 0.71
Cdhr3Q8BL00 Drd4-201ENSMUST00000026569 2799 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Cdhr3Q8BL00 Ptbp3-208ENSMUST00000172768 2147 ntAPPRIS ALT2 TSL 5 BASIC19.51■□□□□ 0.71
Cdhr3Q8BL00 Phlda3-201ENSMUST00000038945 1435 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Cdhr3Q8BL00 Fbxl5-205ENSMUST00000121736 2144 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
Cdhr3Q8BL00 Cnot6-201ENSMUST00000020624 2498 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
Cdhr3Q8BL00 Pax1-201ENSMUST00000109968 2643 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Cdhr3Q8BL00 Tmem143-201ENSMUST00000069772 2297 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Cdhr3Q8BL00 Neurl4-211ENSMUST00000177138 4886 ntAPPRIS ALT2 TSL 1 (best) BASIC19.48■□□□□ 0.71
Cdhr3Q8BL00 Rhbdl1-201ENSMUST00000026831 1711 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Cdhr3Q8BL00 Mtf2-202ENSMUST00000112626 1968 ntTSL 5 BASIC19.48■□□□□ 0.71
Cdhr3Q8BL00 AW121686-201ENSMUST00000181049 2200 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
Cdhr3Q8BL00 Gm11542-201ENSMUST00000126480 1511 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
Cdhr3Q8BL00 4932443I19Rik-201ENSMUST00000166277 799 ntAPPRIS P2 TSL 1 (best) BASIC19.48■□□□□ 0.71
Cdhr3Q8BL00 Tceal5-201ENSMUST00000066819 1044 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Cdhr3Q8BL00 Dact1-202ENSMUST00000150639 2448 ntAPPRIS P1 TSL 3 BASIC19.48■□□□□ 0.71
Cdhr3Q8BL00 Ccdc9-201ENSMUST00000041010 2379 ntAPPRIS P3 TSL 1 (best) BASIC19.48■□□□□ 0.71
Cdhr3Q8BL00 Gimap1-205ENSMUST00000204168 1469 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Cdhr3Q8BL00 Azin2-202ENSMUST00000106068 2049 ntAPPRIS P1 TSL 5 BASIC19.47■□□□□ 0.71
Cdhr3Q8BL00 Slc15a4-201ENSMUST00000031367 2732 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Cdhr3Q8BL00 Kcnk12-201ENSMUST00000055221 1936 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Cdhr3Q8BL00 Gm15156-201ENSMUST00000148217 417 ntTSL 3 BASIC19.47■□□□□ 0.71
Cdhr3Q8BL00 Evx2-202ENSMUST00000173623 1428 ntAPPRIS P2 TSL 1 (best) BASIC19.47■□□□□ 0.71
Cdhr3Q8BL00 Otulin-201ENSMUST00000059662 1491 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Cdhr3Q8BL00 Opn3-201ENSMUST00000027809 1913 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Cdhr3Q8BL00 Gnl1-201ENSMUST00000087200 2848 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Cdhr3Q8BL00 Fancf-201ENSMUST00000169357 1691 ntAPPRIS P1 BASIC19.46■□□□□ 0.71
Cdhr3Q8BL00 Ube2j2-205ENSMUST00000105583 1434 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
Cdhr3Q8BL00 Gm11529-201ENSMUST00000153012 639 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
Cdhr3Q8BL00 Gm6934-201ENSMUST00000194780 1905 ntBASIC19.46■□□□□ 0.71
Cdhr3Q8BL00 Cbln1-202ENSMUST00000169693 1699 ntAPPRIS P1 TSL 5 BASIC19.46■□□□□ 0.71
Cdhr3Q8BL00 Slc25a1-201ENSMUST00000003622 1678 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Retrieved 100 of 76,532 protein–RNA pairs in 26.8 ms