Protein–RNA interactions for Protein: Q8BJ37

Tdp1, Tyrosyl-DNA phosphodiesterase 1, mousemouse

Predictions only

Length 609 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tdp1Q8BJ37 Tmem70-203ENSMUST00000177501 1636 ntAPPRIS P3 TSL 1 (best) BASIC25.26■■□□□ 1.63
Tdp1Q8BJ37 Runx2-211ENSMUST00000162629 1607 ntAPPRIS ALT2 TSL 5 BASIC25.26■■□□□ 1.63
Tdp1Q8BJ37 Gng12-204ENSMUST00000114225 1876 ntAPPRIS P1 TSL 1 (best) BASIC25.26■■□□□ 1.63
Tdp1Q8BJ37 Vmac-201ENSMUST00000067931 2174 ntAPPRIS P3 TSL 1 (best) BASIC25.25■■□□□ 1.63
Tdp1Q8BJ37 AC117769.4-201ENSMUST00000225679 685 ntBASIC25.25■■□□□ 1.63
Tdp1Q8BJ37 Tmem11-201ENSMUST00000062677 1457 ntAPPRIS P1 TSL 1 (best) BASIC25.25■■□□□ 1.63
Tdp1Q8BJ37 Fam149b-203ENSMUST00000090499 2370 ntAPPRIS P4 TSL 1 (best) BASIC25.25■■□□□ 1.63
Tdp1Q8BJ37 Neurog2-201ENSMUST00000029587 2227 ntAPPRIS P1 TSL 1 (best) BASIC25.24■■□□□ 1.63
Tdp1Q8BJ37 Kcnj6-201ENSMUST00000095873 1773 ntTSL 1 (best) BASIC25.24■■□□□ 1.63
Tdp1Q8BJ37 Dynll1-202ENSMUST00000112090 729 ntAPPRIS P1 TSL 2 BASIC25.24■■□□□ 1.63
Tdp1Q8BJ37 Trappc6b-207ENSMUST00000218686 785 ntTSL 3 BASIC25.24■■□□□ 1.63
Tdp1Q8BJ37 Ccna1-202ENSMUST00000197238 1719 ntAPPRIS P1 TSL 5 BASIC25.23■■□□□ 1.63
Tdp1Q8BJ37 B230377A18Rik-202ENSMUST00000192921 1364 ntBASIC25.23■■□□□ 1.63
Tdp1Q8BJ37 Gm13238-201ENSMUST00000117655 780 ntBASIC25.22■■□□□ 1.63
Tdp1Q8BJ37 Gm6217-201ENSMUST00000222182 829 ntAPPRIS P1 BASIC25.22■■□□□ 1.63
Tdp1Q8BJ37 Mogs-201ENSMUST00000032114 2780 ntAPPRIS P1 TSL 1 (best) BASIC25.22■■□□□ 1.63
Tdp1Q8BJ37 Gm22567-201ENSMUST00000175542 342 ntBASIC25.21■■□□□ 1.63
Tdp1Q8BJ37 Gm5522-201ENSMUST00000189483 1242 ntBASIC25.21■■□□□ 1.63
Tdp1Q8BJ37 Asf1a-201ENSMUST00000020004 2201 ntAPPRIS P1 TSL 1 (best) BASIC25.2■■□□□ 1.62
Tdp1Q8BJ37 Dusp2-201ENSMUST00000028846 1617 ntAPPRIS P1 TSL 1 (best) BASIC25.2■■□□□ 1.62
Tdp1Q8BJ37 Jdp2-201ENSMUST00000050687 1643 ntAPPRIS P1 TSL 1 (best) BASIC25.2■■□□□ 1.62
Tdp1Q8BJ37 Sin3b-202ENSMUST00000109950 1024 ntTSL 1 (best) BASIC25.2■■□□□ 1.62
Tdp1Q8BJ37 Rnaset2b-201ENSMUST00000089119 1013 ntAPPRIS P1 TSL 1 (best) BASIC25.2■■□□□ 1.62
Tdp1Q8BJ37 Ube2k-206ENSMUST00000201984 1449 ntTSL 3 BASIC25.2■■□□□ 1.62
Tdp1Q8BJ37 Cadm1-209ENSMUST00000152459 1784 ntTSL 1 (best) BASIC25.19■■□□□ 1.62
Tdp1Q8BJ37 Phf2os1-201ENSMUST00000123212 498 ntTSL 3 BASIC25.19■■□□□ 1.62
Tdp1Q8BJ37 Nsd1-203ENSMUST00000224156 1149 ntBASIC25.19■■□□□ 1.62
Tdp1Q8BJ37 Fgf16-201ENSMUST00000033581 1645 ntAPPRIS P1 TSL 1 (best) BASIC25.19■■□□□ 1.62
Tdp1Q8BJ37 Frat2-201ENSMUST00000059231 2161 ntAPPRIS P1 BASIC25.18■■□□□ 1.62
Tdp1Q8BJ37 Npas1-201ENSMUST00000002053 2091 ntAPPRIS P1 TSL 5 BASIC25.18■■□□□ 1.62
Tdp1Q8BJ37 Tmem106c-201ENSMUST00000064200 1635 ntAPPRIS P1 TSL 1 (best) BASIC25.18■■□□□ 1.62
Tdp1Q8BJ37 Mpnd-208ENSMUST00000159996 1444 ntAPPRIS ALT2 TSL 5 BASIC25.18■■□□□ 1.62
Tdp1Q8BJ37 St7-205ENSMUST00000081635 2115 ntTSL 1 (best) BASIC25.18■■□□□ 1.62
Tdp1Q8BJ37 Jmjd6-201ENSMUST00000047616 1668 ntAPPRIS P1 TSL 1 (best) BASIC25.17■■□□□ 1.62
Tdp1Q8BJ37 5031425E22Rik-201ENSMUST00000101522 2110 ntBASIC25.17■■□□□ 1.62
Tdp1Q8BJ37 March5-202ENSMUST00000112391 1293 ntTSL 1 (best) BASIC25.16■■□□□ 1.62
Tdp1Q8BJ37 Ak2-201ENSMUST00000030583 986 ntAPPRIS P4 TSL 1 (best) BASIC25.16■■□□□ 1.62
Tdp1Q8BJ37 Efna2-201ENSMUST00000003154 2131 ntAPPRIS P1 TSL 1 (best) BASIC25.16■■□□□ 1.62
Tdp1Q8BJ37 Tmx4-202ENSMUST00000110119 596 ntTSL 2 BASIC25.15■■□□□ 1.62
Tdp1Q8BJ37 Gng12-203ENSMUST00000114224 680 ntAPPRIS P1 TSL 3 BASIC25.15■■□□□ 1.62
Tdp1Q8BJ37 Gng12-206ENSMUST00000114227 1125 ntAPPRIS P1 TSL 1 (best) BASIC25.15■■□□□ 1.62
Tdp1Q8BJ37 Vax1-201ENSMUST00000172821 1044 ntAPPRIS P1 TSL 1 (best) BASIC25.15■■□□□ 1.62
Tdp1Q8BJ37 Mnx1-201ENSMUST00000001608 2018 ntAPPRIS ALT2 TSL 5 BASIC25.15■■□□□ 1.62
Tdp1Q8BJ37 Cckbr-202ENSMUST00000181339 1326 ntTSL 1 (best) BASIC25.14■■□□□ 1.62
Tdp1Q8BJ37 2310061I04Rik-202ENSMUST00000146451 2081 ntTSL 1 (best) BASIC25.14■■□□□ 1.61
Tdp1Q8BJ37 Arhgap22-201ENSMUST00000111955 2148 ntTSL 1 (best) BASIC25.13■■□□□ 1.61
Tdp1Q8BJ37 Arhgap39-204ENSMUST00000176219 542 ntTSL 5 BASIC25.13■■□□□ 1.61
Tdp1Q8BJ37 Gm28417-202ENSMUST00000185881 538 ntTSL 3 BASIC25.13■■□□□ 1.61
Tdp1Q8BJ37 Gm43566-201ENSMUST00000196851 808 ntBASIC25.13■■□□□ 1.61
Tdp1Q8BJ37 H2afj-202ENSMUST00000203982 577 ntAPPRIS ALT1 TSL 3 BASIC25.13■■□□□ 1.61
Tdp1Q8BJ37 Rgs7-206ENSMUST00000194555 2431 ntAPPRIS ALT2 TSL 1 (best) BASIC25.13■■□□□ 1.61
Tdp1Q8BJ37 Siah1a-201ENSMUST00000045296 1968 ntAPPRIS P1 TSL 1 (best) BASIC25.13■■□□□ 1.61
Tdp1Q8BJ37 Sox17-202ENSMUST00000116652 1512 ntAPPRIS P1 TSL 1 (best) BASIC25.12■■□□□ 1.61
Tdp1Q8BJ37 Reep6-202ENSMUST00000105354 2208 ntAPPRIS P3 TSL 1 (best) BASIC25.12■■□□□ 1.61
Tdp1Q8BJ37 Reep6-205ENSMUST00000105358 2208 ntTSL 1 (best) BASIC25.12■■□□□ 1.61
Tdp1Q8BJ37 Rin3-207ENSMUST00000150795 937 ntTSL 1 (best) BASIC25.12■■□□□ 1.61
Tdp1Q8BJ37 AC102554.1-201ENSMUST00000216236 537 ntTSL 5 BASIC25.12■■□□□ 1.61
Tdp1Q8BJ37 Cys1-207ENSMUST00000186602 1757 ntAPPRIS P1 TSL 1 (best) BASIC25.12■■□□□ 1.61
Tdp1Q8BJ37 Gsc2-201ENSMUST00000012279 1172 ntAPPRIS P1 TSL 1 (best) BASIC25.11■■□□□ 1.61
Tdp1Q8BJ37 Fam98c-209ENSMUST00000164589 1293 ntAPPRIS P1 TSL 5 BASIC25.11■■□□□ 1.61
Tdp1Q8BJ37 Tmem235-201ENSMUST00000093905 1820 ntAPPRIS P1 TSL 5 BASIC25.11■■□□□ 1.61
Tdp1Q8BJ37 Fam196a-201ENSMUST00000171394 2490 ntAPPRIS P1 TSL 5 BASIC25.11■■□□□ 1.61
Tdp1Q8BJ37 A430027H14Rik-201ENSMUST00000191809 1467 ntBASIC25.09■■□□□ 1.61
Tdp1Q8BJ37 Ppia-202ENSMUST00000132846 1170 ntAPPRIS P1 TSL 1 (best) BASIC25.08■■□□□ 1.61
Tdp1Q8BJ37 Gm45444-201ENSMUST00000211394 898 ntBASIC25.08■■□□□ 1.61
Tdp1Q8BJ37 Syce2-202ENSMUST00000136026 1686 ntAPPRIS P3 TSL 1 (best) BASIC25.07■■□□□ 1.6
Tdp1Q8BJ37 AC164424.2-201ENSMUST00000223281 725 ntTSL 3 BASIC25.07■■□□□ 1.6
Tdp1Q8BJ37 AC093043.1-201ENSMUST00000226700 898 ntBASIC25.07■■□□□ 1.6
Tdp1Q8BJ37 Mpv17l2-201ENSMUST00000038626 980 ntAPPRIS P1 TSL 1 (best) BASIC25.07■■□□□ 1.6
Tdp1Q8BJ37 AC122428.3-201ENSMUST00000215551 2290 ntBASIC25.07■■□□□ 1.6
Tdp1Q8BJ37 Srd5a3-201ENSMUST00000031143 1747 ntAPPRIS P2 TSL 1 (best) BASIC25.06■■□□□ 1.6
Tdp1Q8BJ37 Slc16a11-207ENSMUST00000136328 1403 ntTSL 5 BASIC25.05■■□□□ 1.6
Tdp1Q8BJ37 Btg3-201ENSMUST00000023570 1414 ntAPPRIS P1 TSL 1 (best) BASIC25.05■■□□□ 1.6
Tdp1Q8BJ37 Adra1d-201ENSMUST00000103184 1899 ntAPPRIS P1 TSL 1 (best) BASIC25.05■■□□□ 1.6
Tdp1Q8BJ37 Gm15820-201ENSMUST00000201566 728 ntBASIC25.05■■□□□ 1.6
Tdp1Q8BJ37 Gm45095-201ENSMUST00000206736 254 ntTSL 5 BASIC25.05■■□□□ 1.6
Tdp1Q8BJ37 Cldnd1-204ENSMUST00000162057 1540 ntAPPRIS P1 TSL 5 BASIC25.05■■□□□ 1.6
Tdp1Q8BJ37 Exosc8-201ENSMUST00000029316 1300 ntAPPRIS P1 TSL 1 (best) BASIC25.05■■□□□ 1.6
Tdp1Q8BJ37 Dapk2-201ENSMUST00000034944 1772 ntAPPRIS P1 TSL 1 (best) BASIC25.05■■□□□ 1.6
Tdp1Q8BJ37 Sarnp-203ENSMUST00000219512 953 ntTSL 3 BASIC25.04■■□□□ 1.6
Tdp1Q8BJ37 Paqr3-202ENSMUST00000112968 1875 ntTSL 1 (best) BASIC25.04■■□□□ 1.6
Tdp1Q8BJ37 Olfm2-203ENSMUST00000215999 1895 ntAPPRIS ALT2 TSL 3 BASIC25.04■■□□□ 1.6
Tdp1Q8BJ37 Kif1c-205ENSMUST00000152618 1943 ntTSL 1 (best) BASIC25.04■■□□□ 1.6
Tdp1Q8BJ37 Adat3-204ENSMUST00000038411 1411 ntAPPRIS P1 TSL 2 BASIC25.03■■□□□ 1.6
Tdp1Q8BJ37 Nrsn1-201ENSMUST00000057866 2222 ntAPPRIS P1 TSL 1 (best) BASIC25.03■■□□□ 1.6
Tdp1Q8BJ37 Fam168b-204ENSMUST00000170092 941 ntTSL 5 BASIC25.03■■□□□ 1.6
Tdp1Q8BJ37 Cpe-201ENSMUST00000048967 2117 ntAPPRIS P1 TSL 1 (best) BASIC25.03■■□□□ 1.6
Tdp1Q8BJ37 Pmpca-202ENSMUST00000114093 1638 ntTSL 1 (best) BASIC25.02■■□□□ 1.6
Tdp1Q8BJ37 Susd3-203ENSMUST00000119721 1249 ntAPPRIS ALT2 TSL 1 (best) BASIC25.02■■□□□ 1.6
Tdp1Q8BJ37 Gm16599-201ENSMUST00000148082 1182 ntTSL 1 (best) BASIC25.02■■□□□ 1.6
Tdp1Q8BJ37 AC164433.2-201ENSMUST00000226346 1701 ntBASIC25.01■■□□□ 1.59
Tdp1Q8BJ37 Cmas-201ENSMUST00000032419 1760 ntAPPRIS P1 TSL 1 (best) BASIC25.01■■□□□ 1.59
Tdp1Q8BJ37 Ndfip1-201ENSMUST00000025293 930 ntAPPRIS P1 TSL 1 (best) BASIC25.01■■□□□ 1.59
Tdp1Q8BJ37 Clpp-201ENSMUST00000002735 1207 ntAPPRIS P1 TSL 1 (best) BASIC25.01■■□□□ 1.59
Tdp1Q8BJ37 A930002H24Rik-201ENSMUST00000050753 492 ntAPPRIS P1 BASIC25.01■■□□□ 1.59
Tdp1Q8BJ37 Srcap-202ENSMUST00000098025 1257 ntTSL 5 BASIC25.01■■□□□ 1.59
Tdp1Q8BJ37 Unc119-201ENSMUST00000002127 1329 ntAPPRIS P1 TSL 1 (best) BASIC25.01■■□□□ 1.59
Tdp1Q8BJ37 2810002D19Rik-201ENSMUST00000152313 2040 ntTSL 1 (best) BASIC25.01■■□□□ 1.59
Tdp1Q8BJ37 Fn1-208ENSMUST00000186940 1350 ntTSL 1 (best) BASIC25.01■■□□□ 1.59
Tdp1Q8BJ37 Gm38287-201ENSMUST00000195193 2051 ntTSL 3 BASIC25■■□□□ 1.59
Retrieved 100 of 76,532 protein–RNA pairs in 26.4 ms