Protein–RNA interactions for Protein: Q80YV2

Zc3hc1, Nuclear-interacting partner of ALK, mousemouse

Predictions only

Length 501 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Zc3hc1Q80YV2 Dyrk1b-202ENSMUST00000172467 2523 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
Zc3hc1Q80YV2 Dyrk1b-201ENSMUST00000085901 2534 ntAPPRIS P3 TSL 1 (best) BASIC20.54■□□□□ 0.88
Zc3hc1Q80YV2 Tmem158-201ENSMUST00000068140 1712 ntAPPRIS P1 BASIC20.54■□□□□ 0.88
Zc3hc1Q80YV2 Gltp-203ENSMUST00000112214 944 ntTSL 3 BASIC20.54■□□□□ 0.88
Zc3hc1Q80YV2 Mxra7-202ENSMUST00000047715 757 ntAPPRIS ALT2 TSL 1 (best) BASIC20.54■□□□□ 0.88
Zc3hc1Q80YV2 Ccdc9-201ENSMUST00000041010 2379 ntAPPRIS P3 TSL 1 (best) BASIC20.54■□□□□ 0.88
Zc3hc1Q80YV2 Lrp2-202ENSMUST00000092551 2228 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
Zc3hc1Q80YV2 Krt10-201ENSMUST00000103131 2094 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Zc3hc1Q80YV2 Ptpn4-203ENSMUST00000163435 2365 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
Zc3hc1Q80YV2 Acvr2b-201ENSMUST00000035093 1729 ntTSL 5 BASIC20.53■□□□□ 0.88
Zc3hc1Q80YV2 Phf2-201ENSMUST00000035540 5494 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
Zc3hc1Q80YV2 Dtnbp1-201ENSMUST00000072329 1362 ntAPPRIS P2 TSL 1 (best) BASIC20.52■□□□□ 0.88
Zc3hc1Q80YV2 AW121686-201ENSMUST00000181049 2200 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
Zc3hc1Q80YV2 Adgrb1-202ENSMUST00000170845 2704 ntTSL 5 BASIC20.52■□□□□ 0.87
Zc3hc1Q80YV2 Mlx-201ENSMUST00000017945 1965 ntAPPRIS P3 TSL 1 (best) BASIC20.52■□□□□ 0.87
Zc3hc1Q80YV2 Snx7-201ENSMUST00000029639 2021 ntAPPRIS P2 TSL 1 (best) BASIC20.51■□□□□ 0.87
Zc3hc1Q80YV2 Grb2-201ENSMUST00000021090 2709 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Zc3hc1Q80YV2 Fank1-204ENSMUST00000209511 1392 ntTSL 5 BASIC20.51■□□□□ 0.87
Zc3hc1Q80YV2 AC163623.1-201ENSMUST00000213738 727 ntAPPRIS P1 TSL 3 BASIC20.51■□□□□ 0.87
Zc3hc1Q80YV2 Terf2-202ENSMUST00000068421 2667 ntAPPRIS ALT2 TSL 5 BASIC20.51■□□□□ 0.87
Zc3hc1Q80YV2 Msl2-202ENSMUST00000189616 2612 ntTSL 5 BASIC20.51■□□□□ 0.87
Zc3hc1Q80YV2 Kcnk12-201ENSMUST00000055221 1936 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Zc3hc1Q80YV2 Drd4-201ENSMUST00000026569 2799 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Zc3hc1Q80YV2 Chst14-201ENSMUST00000099546 2090 ntAPPRIS P1 BASIC20.5■□□□□ 0.87
Zc3hc1Q80YV2 Phactr2-202ENSMUST00000105543 2735 ntAPPRIS P2 TSL 1 (best) BASIC20.5■□□□□ 0.87
Zc3hc1Q80YV2 Dhrs13os-201ENSMUST00000150471 2429 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
Zc3hc1Q80YV2 Dact1-202ENSMUST00000150639 2448 ntAPPRIS P1 TSL 3 BASIC20.5■□□□□ 0.87
Zc3hc1Q80YV2 Smarcc1-201ENSMUST00000088716 5717 ntAPPRIS P2 TSL 1 (best) BASIC20.5■□□□□ 0.87
Zc3hc1Q80YV2 Banp-202ENSMUST00000093078 2289 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
Zc3hc1Q80YV2 Kmt5a-201ENSMUST00000059580 2739 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Zc3hc1Q80YV2 Mapkap1-201ENSMUST00000113123 1530 ntTSL 5 BASIC20.49■□□□□ 0.87
Zc3hc1Q80YV2 Mtf2-202ENSMUST00000112626 1968 ntTSL 5 BASIC20.49■□□□□ 0.87
Zc3hc1Q80YV2 Susd6-203ENSMUST00000220238 2127 ntAPPRIS ALT2 TSL 1 (best) BASIC20.49■□□□□ 0.87
Zc3hc1Q80YV2 B230322F03Rik-201ENSMUST00000181932 1569 ntBASIC20.49■□□□□ 0.87
Zc3hc1Q80YV2 Slc30a3-201ENSMUST00000031037 2089 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Zc3hc1Q80YV2 P4htm-201ENSMUST00000006853 1841 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Zc3hc1Q80YV2 Ski-201ENSMUST00000030917 5522 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Zc3hc1Q80YV2 Gm37136-201ENSMUST00000194368 194 ntBASIC20.48■□□□□ 0.87
Zc3hc1Q80YV2 Prph-201ENSMUST00000024249 1769 ntAPPRIS ALT2 TSL 1 (best) BASIC20.48■□□□□ 0.87
Zc3hc1Q80YV2 Apcdd1-201ENSMUST00000096554 2799 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Zc3hc1Q80YV2 Cadps-204ENSMUST00000177814 5461 ntAPPRIS ALT2 TSL 5 BASIC20.48■□□□□ 0.87
Zc3hc1Q80YV2 Rab3il1-202ENSMUST00000117641 2004 ntAPPRIS ALT2 TSL 1 (best) BASIC20.48■□□□□ 0.87
Zc3hc1Q80YV2 Ubac1-201ENSMUST00000036509 1852 ntAPPRIS P2 TSL 1 (best) BASIC20.47■□□□□ 0.87
Zc3hc1Q80YV2 Mnx1-202ENSMUST00000165512 2245 ntAPPRIS P2 TSL 1 (best) BASIC20.47■□□□□ 0.87
Zc3hc1Q80YV2 Rhbdl1-201ENSMUST00000026831 1711 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Zc3hc1Q80YV2 A230020J21Rik-202ENSMUST00000192407 1649 ntTSL 2 BASIC20.47■□□□□ 0.87
Zc3hc1Q80YV2 Dgat2-201ENSMUST00000033001 2262 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Zc3hc1Q80YV2 C1qtnf5-201ENSMUST00000114815 1215 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Zc3hc1Q80YV2 Triobp-201ENSMUST00000109687 2570 ntAPPRIS ALT2 TSL 1 (best) BASIC20.45■□□□□ 0.86
Zc3hc1Q80YV2 Bod1-202ENSMUST00000109415 799 ntAPPRIS P1 TSL 2 BASIC20.45■□□□□ 0.86
Zc3hc1Q80YV2 Sh3gl3-201ENSMUST00000032874 1647 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Zc3hc1Q80YV2 Ppp4r2-201ENSMUST00000063854 4874 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Zc3hc1Q80YV2 Zfp513-201ENSMUST00000031562 2213 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
Zc3hc1Q80YV2 Gnl1-201ENSMUST00000087200 2848 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Zc3hc1Q80YV2 Ing2-201ENSMUST00000080353 2812 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Zc3hc1Q80YV2 Cic-202ENSMUST00000163320 6096 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
Zc3hc1Q80YV2 Cic-201ENSMUST00000005578 6099 ntTSL 5 BASIC20.44■□□□□ 0.86
Zc3hc1Q80YV2 Nkx2-4-201ENSMUST00000067020 1725 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Zc3hc1Q80YV2 Dhrs13-201ENSMUST00000021187 1779 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Zc3hc1Q80YV2 Arglu1-201ENSMUST00000048545 3197 ntAPPRIS P1 TSL 2 BASIC20.43■□□□□ 0.86
Zc3hc1Q80YV2 Gm19582-201ENSMUST00000187511 841 ntTSL 2 BASIC20.43■□□□□ 0.86
Zc3hc1Q80YV2 Nkain2-201ENSMUST00000092602 558 ntBASIC20.43■□□□□ 0.86
Zc3hc1Q80YV2 Lgi2-201ENSMUST00000039750 6456 ntAPPRIS P3 TSL 1 (best) BASIC20.43■□□□□ 0.86
Zc3hc1Q80YV2 Pou2f2-204ENSMUST00000108416 1754 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
Zc3hc1Q80YV2 Taf4-204ENSMUST00000227325 4380 ntAPPRIS ALT2 BASIC20.43■□□□□ 0.86
Zc3hc1Q80YV2 Olfm2-203ENSMUST00000215999 1895 ntAPPRIS ALT2 TSL 3 BASIC20.42■□□□□ 0.86
Zc3hc1Q80YV2 Gm20503-201ENSMUST00000174664 1294 ntAPPRIS P1 TSL 5 BASIC20.42■□□□□ 0.86
Zc3hc1Q80YV2 Antxr1-204ENSMUST00000204805 2156 ntAPPRIS ALT2 TSL 5 BASIC20.42■□□□□ 0.86
Zc3hc1Q80YV2 Asf1a-201ENSMUST00000020004 2201 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Zc3hc1Q80YV2 Nt5c3-201ENSMUST00000031793 1676 ntAPPRIS P3 TSL 1 (best) BASIC20.42■□□□□ 0.86
Zc3hc1Q80YV2 Whrn-202ENSMUST00000063672 2804 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
Zc3hc1Q80YV2 A230087F16Rik-201ENSMUST00000181055 2098 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
Zc3hc1Q80YV2 Nrxn1-213ENSMUST00000172466 2477 ntTSL 5 BASIC20.41■□□□□ 0.86
Zc3hc1Q80YV2 Syce2-202ENSMUST00000136026 1686 ntAPPRIS P3 TSL 1 (best) BASIC20.4■□□□□ 0.86
Zc3hc1Q80YV2 Cnot6-201ENSMUST00000020624 2498 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
Zc3hc1Q80YV2 Dyrk2-201ENSMUST00000004281 6129 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
Zc3hc1Q80YV2 Ptbp3-208ENSMUST00000172768 2147 ntAPPRIS ALT2 TSL 5 BASIC20.39■□□□□ 0.85
Zc3hc1Q80YV2 March9-201ENSMUST00000040307 3037 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
Zc3hc1Q80YV2 Slc25a1-201ENSMUST00000003622 1678 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
Zc3hc1Q80YV2 Slc15a4-201ENSMUST00000031367 2732 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
Zc3hc1Q80YV2 Larp4b-204ENSMUST00000188939 2658 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
Zc3hc1Q80YV2 Dedd-204ENSMUST00000111300 2563 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
Zc3hc1Q80YV2 Gm6934-201ENSMUST00000194780 1905 ntBASIC20.38■□□□□ 0.85
Zc3hc1Q80YV2 Eci1-201ENSMUST00000024946 1091 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
Zc3hc1Q80YV2 Dnajb2-202ENSMUST00000082158 1253 ntAPPRIS P1 TSL 5 BASIC20.38■□□□□ 0.85
Zc3hc1Q80YV2 Rfx5-204ENSMUST00000107255 2350 ntAPPRIS P1 TSL 5 BASIC20.38■□□□□ 0.85
Zc3hc1Q80YV2 AC061963.1-201ENSMUST00000213180 1765 ntTSL 5 BASIC20.38■□□□□ 0.85
Zc3hc1Q80YV2 Kcnq5-201ENSMUST00000029667 6562 ntAPPRIS P3 TSL 1 (best) BASIC20.38■□□□□ 0.85
Zc3hc1Q80YV2 Sdccag3-201ENSMUST00000028293 2031 ntAPPRIS ALT2 TSL 1 (best) BASIC20.37■□□□□ 0.85
Zc3hc1Q80YV2 Dlx2-201ENSMUST00000024159 2473 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Zc3hc1Q80YV2 Ccdc177-201ENSMUST00000073251 5775 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Zc3hc1Q80YV2 Rcor3-207ENSMUST00000192866 1844 ntAPPRIS ALT2 TSL 5 BASIC20.37■□□□□ 0.85
Zc3hc1Q80YV2 Tmem235-201ENSMUST00000093905 1820 ntAPPRIS P1 TSL 5 BASIC20.37■□□□□ 0.85
Zc3hc1Q80YV2 Gng13-201ENSMUST00000115108 347 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Zc3hc1Q80YV2 Rbm45-201ENSMUST00000046389 1898 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Zc3hc1Q80YV2 Eml4-202ENSMUST00000096766 5445 ntAPPRIS ALT2 TSL 1 (best) BASIC20.36■□□□□ 0.85
Zc3hc1Q80YV2 Rab21-201ENSMUST00000020343 4602 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Zc3hc1Q80YV2 Fam89b-202ENSMUST00000116558 1189 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
Zc3hc1Q80YV2 Gm20208-202ENSMUST00000219905 1528 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
Zc3hc1Q80YV2 Man1a-201ENSMUST00000003843 5137 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Retrieved 100 of 76,532 protein–RNA pairs in 47.8 ms