Protein–RNA interactions for Protein: Q80SX8

Pif1, ATP-dependent DNA helicase PIF1, mousemouse

Predictions only

Length 650 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pif1Q80SX8 Gm21989-201ENSMUST00000174530 1609 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
Pif1Q80SX8 Gm15546-201ENSMUST00000122095 826 ntBASIC20.76■□□□□ 0.91
Pif1Q80SX8 D17Wsu92e-201ENSMUST00000075076 1470 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
Pif1Q80SX8 Ints11-202ENSMUST00000120794 1884 ntTSL 5 BASIC20.75■□□□□ 0.91
Pif1Q80SX8 Rgs7-206ENSMUST00000194555 2431 ntAPPRIS ALT2 TSL 1 (best) BASIC20.75■□□□□ 0.91
Pif1Q80SX8 Clk2-202ENSMUST00000121212 2154 ntAPPRIS P3 TSL 1 (best) BASIC20.75■□□□□ 0.91
Pif1Q80SX8 Isoc1-201ENSMUST00000025503 2563 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Pif1Q80SX8 Crls1-201ENSMUST00000028835 1924 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Pif1Q80SX8 Zc3h6-201ENSMUST00000110319 1484 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
Pif1Q80SX8 Gm22567-201ENSMUST00000175542 342 ntBASIC20.74■□□□□ 0.91
Pif1Q80SX8 Gm7544-201ENSMUST00000222426 828 ntAPPRIS P1 BASIC20.74■□□□□ 0.91
Pif1Q80SX8 Gxylt1-202ENSMUST00000057896 1891 ntAPPRIS ALT2 TSL 5 BASIC20.74■□□□□ 0.91
Pif1Q80SX8 Zswim5-201ENSMUST00000044823 5582 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Pif1Q80SX8 Gm4419-202ENSMUST00000226239 1431 ntBASIC20.73■□□□□ 0.91
Pif1Q80SX8 Mapkap1-202ENSMUST00000113124 1758 ntAPPRIS ALT1 TSL 5 BASIC20.73■□□□□ 0.91
Pif1Q80SX8 Oaz2-206ENSMUST00000153700 1843 ntAPPRIS P2 TSL 5 BASIC20.73■□□□□ 0.91
Pif1Q80SX8 Usf1-210ENSMUST00000167546 1822 ntAPPRIS P1 TSL 5 BASIC20.73■□□□□ 0.91
Pif1Q80SX8 Igfbp3-202ENSMUST00000135887 1709 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Pif1Q80SX8 Arx-202ENSMUST00000113947 2454 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Pif1Q80SX8 Mnx1-201ENSMUST00000001608 2018 ntAPPRIS ALT2 TSL 5 BASIC20.72■□□□□ 0.91
Pif1Q80SX8 Pdgfa-204ENSMUST00000110897 1287 ntAPPRIS P1 TSL 5 BASIC20.72■□□□□ 0.91
Pif1Q80SX8 Snx21-203ENSMUST00000152471 1243 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
Pif1Q80SX8 Trappc6b-207ENSMUST00000218686 785 ntTSL 3 BASIC20.72■□□□□ 0.91
Pif1Q80SX8 Psip1-203ENSMUST00000107215 1898 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
Pif1Q80SX8 Rab40c-209ENSMUST00000179998 2456 ntAPPRIS P1 TSL 5 BASIC20.72■□□□□ 0.91
Pif1Q80SX8 Acvr2b-201ENSMUST00000035093 1729 ntTSL 5 BASIC20.72■□□□□ 0.91
Pif1Q80SX8 Kansl2-201ENSMUST00000023727 2311 ntAPPRIS ALT2 TSL 5 BASIC20.71■□□□□ 0.91
Pif1Q80SX8 Vdac1-202ENSMUST00000102758 2022 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Pif1Q80SX8 Pdcd4-203ENSMUST00000165617 1806 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Pif1Q80SX8 Fam220a-205ENSMUST00000169329 2331 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Pif1Q80SX8 Dexi-201ENSMUST00000038281 1389 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Pif1Q80SX8 Kctd2-201ENSMUST00000103035 1764 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Pif1Q80SX8 Gm2415-202ENSMUST00000134688 401 ntTSL 2 BASIC20.7■□□□□ 0.9
Pif1Q80SX8 Gm12905-201ENSMUST00000153814 658 ntTSL 2 BASIC20.7■□□□□ 0.9
Pif1Q80SX8 AC166358.2-201ENSMUST00000223403 734 ntTSL 5 BASIC20.7■□□□□ 0.9
Pif1Q80SX8 Lsm4-201ENSMUST00000034311 925 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Pif1Q80SX8 St7-208ENSMUST00000115419 2194 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
Pif1Q80SX8 Frat2-201ENSMUST00000059231 2161 ntAPPRIS P1 BASIC20.7■□□□□ 0.9
Pif1Q80SX8 Bag1-203ENSMUST00000191273 1348 ntAPPRIS ALT2 TSL 1 (best) BASIC20.7■□□□□ 0.9
Pif1Q80SX8 Ipmk-203ENSMUST00000121446 1492 ntAPPRIS ALT2 TSL 5 BASIC20.69■□□□□ 0.9
Pif1Q80SX8 Usp2-206ENSMUST00000176416 1486 ntAPPRIS ALT2 TSL 1 (best) BASIC20.69■□□□□ 0.9
Pif1Q80SX8 Hras-202ENSMUST00000097957 1199 ntAPPRIS P1 TSL 2 BASIC20.69■□□□□ 0.9
Pif1Q80SX8 Fam168b-201ENSMUST00000047534 5030 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Pif1Q80SX8 Tirap-205ENSMUST00000176685 1783 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Pif1Q80SX8 Coprs-201ENSMUST00000033839 793 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Pif1Q80SX8 Suv39h2-202ENSMUST00000060618 1831 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
Pif1Q80SX8 Jag2-201ENSMUST00000075827 5106 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Pif1Q80SX8 Msto1-202ENSMUST00000126245 1875 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Pif1Q80SX8 Preb-209ENSMUST00000202567 1869 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
Pif1Q80SX8 Gm5522-201ENSMUST00000189483 1242 ntBASIC20.67■□□□□ 0.9
Pif1Q80SX8 Gm6217-201ENSMUST00000222182 829 ntAPPRIS P1 BASIC20.67■□□□□ 0.9
Pif1Q80SX8 Foxe3-201ENSMUST00000050940 867 ntAPPRIS P1 BASIC20.67■□□□□ 0.9
Pif1Q80SX8 Eif5a-208ENSMUST00000108611 1353 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Pif1Q80SX8 Cyp2r1-202ENSMUST00000119712 917 ntTSL 5 BASIC20.66■□□□□ 0.9
Pif1Q80SX8 H2afy-202ENSMUST00000045788 1933 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
Pif1Q80SX8 Kcnq5-206ENSMUST00000173404 2775 ntAPPRIS ALT2 TSL 5 BASIC20.66■□□□□ 0.9
Pif1Q80SX8 Spryd7-202ENSMUST00000100496 1459 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
Pif1Q80SX8 Ntn5-203ENSMUST00000183120 1491 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
Pif1Q80SX8 Gm43592-201ENSMUST00000196922 1165 ntBASIC20.65■□□□□ 0.9
Pif1Q80SX8 Rnaset2b-201ENSMUST00000089119 1013 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Pif1Q80SX8 Sox3-201ENSMUST00000135107 2065 ntAPPRIS P1 BASIC20.65■□□□□ 0.9
Pif1Q80SX8 AC117769.4-201ENSMUST00000225679 685 ntBASIC20.64■□□□□ 0.89
Pif1Q80SX8 Srcap-211ENSMUST00000189136 1960 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
Pif1Q80SX8 Hist2h3c1-201ENSMUST00000176059 1820 ntAPPRIS P1 BASIC20.63■□□□□ 0.89
Pif1Q80SX8 Hist2h3c1-202ENSMUST00000177796 1825 ntBASIC20.63■□□□□ 0.89
Pif1Q80SX8 Rcor2-201ENSMUST00000066646 2801 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Pif1Q80SX8 Dhrs11-201ENSMUST00000047560 1254 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Pif1Q80SX8 Agap3-201ENSMUST00000024123 3207 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Pif1Q80SX8 Pcsk1n-201ENSMUST00000041096 2193 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Pif1Q80SX8 Sin3b-202ENSMUST00000109950 1024 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
Pif1Q80SX8 Dynll1-202ENSMUST00000112090 729 ntAPPRIS P1 TSL 2 BASIC20.61■□□□□ 0.89
Pif1Q80SX8 March5-202ENSMUST00000112391 1293 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
Pif1Q80SX8 Phf2os1-201ENSMUST00000123212 498 ntTSL 3 BASIC20.61■□□□□ 0.89
Pif1Q80SX8 Rin3-207ENSMUST00000150795 937 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
Pif1Q80SX8 Nsd1-203ENSMUST00000224156 1149 ntBASIC20.61■□□□□ 0.89
Pif1Q80SX8 Pdpk1-203ENSMUST00000115407 1730 ntTSL 5 BASIC20.61■□□□□ 0.89
Pif1Q80SX8 Tmem55b-206ENSMUST00000161166 1445 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
Pif1Q80SX8 Atp5a1-202ENSMUST00000114748 2674 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
Pif1Q80SX8 Fus-201ENSMUST00000077609 1831 ntAPPRIS ALT2 TSL 1 (best) BASIC20.6■□□□□ 0.89
Pif1Q80SX8 Tmx4-202ENSMUST00000110119 596 ntTSL 2 BASIC20.6■□□□□ 0.89
Pif1Q80SX8 Fam98c-209ENSMUST00000164589 1293 ntAPPRIS P1 TSL 5 BASIC20.6■□□□□ 0.89
Pif1Q80SX8 Gm28417-202ENSMUST00000185881 538 ntTSL 3 BASIC20.6■□□□□ 0.89
Pif1Q80SX8 Runx2-211ENSMUST00000162629 1607 ntAPPRIS ALT2 TSL 5 BASIC20.6■□□□□ 0.89
Pif1Q80SX8 Fam220a-206ENSMUST00000196487 2278 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Pif1Q80SX8 Vax1-201ENSMUST00000172821 1044 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Pif1Q80SX8 AC102554.1-201ENSMUST00000216236 537 ntTSL 5 BASIC20.59■□□□□ 0.89
Pif1Q80SX8 Ak2-201ENSMUST00000030583 986 ntAPPRIS P4 TSL 1 (best) BASIC20.59■□□□□ 0.89
Pif1Q80SX8 B230377A18Rik-202ENSMUST00000192921 1364 ntBASIC20.59■□□□□ 0.89
Pif1Q80SX8 Emid1-201ENSMUST00000062821 1947 ntAPPRIS P2 TSL 1 (best) BASIC20.59■□□□□ 0.89
Pif1Q80SX8 Lrrc4b-201ENSMUST00000058667 2728 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
Pif1Q80SX8 Tmem11-201ENSMUST00000062677 1457 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
Pif1Q80SX8 Jdp2-201ENSMUST00000050687 1643 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
Pif1Q80SX8 AC164424.2-201ENSMUST00000223281 725 ntTSL 3 BASIC20.58■□□□□ 0.89
Pif1Q80SX8 Mpv17l2-201ENSMUST00000038626 980 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
Pif1Q80SX8 Pde8b-204ENSMUST00000159608 2370 ntTSL 5 BASIC20.58■□□□□ 0.88
Pif1Q80SX8 Amigo1-201ENSMUST00000050909 5030 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
Pif1Q80SX8 Kcnk2-205ENSMUST00000192723 1642 ntAPPRIS ALT1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Pif1Q80SX8 Gng12-203ENSMUST00000114224 680 ntAPPRIS P1 TSL 3 BASIC20.57■□□□□ 0.88
Pif1Q80SX8 Gng12-206ENSMUST00000114227 1125 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Pif1Q80SX8 Gm13238-201ENSMUST00000117655 780 ntBASIC20.57■□□□□ 0.88
Retrieved 100 of 76,532 protein–RNA pairs in 30.4 ms