Protein–RNA interactions for Protein: Q7TSG5

Sh3d21, SH3 domain-containing protein 21, mousemouse

Predictions only

Length 549 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sh3d21Q7TSG5 Gorasp2-205ENSMUST00000133432 1941 ntAPPRIS ALT2 TSL 1 (best) BASIC24.53■■□□□ 1.52
Sh3d21Q7TSG5 Smurf2-202ENSMUST00000103067 5290 ntTSL 5 BASIC24.53■■□□□ 1.52
Sh3d21Q7TSG5 Gm42699-201ENSMUST00000198104 1657 ntBASIC24.53■■□□□ 1.52
Sh3d21Q7TSG5 Pdpk1-203ENSMUST00000115407 1730 ntTSL 5 BASIC24.52■■□□□ 1.52
Sh3d21Q7TSG5 Rragc-201ENSMUST00000030399 2593 ntAPPRIS P1 TSL 1 (best) BASIC24.52■■□□□ 1.52
Sh3d21Q7TSG5 Homer3-201ENSMUST00000003669 2323 ntAPPRIS ALT1 TSL 1 (best) BASIC24.52■■□□□ 1.52
Sh3d21Q7TSG5 A830010M20Rik-207ENSMUST00000162298 1408 ntTSL 5 BASIC24.52■■□□□ 1.52
Sh3d21Q7TSG5 St3gal2-202ENSMUST00000117534 2177 ntTSL 1 (best) BASIC24.52■■□□□ 1.52
Sh3d21Q7TSG5 Shb-201ENSMUST00000061986 2244 ntAPPRIS P1 TSL 1 (best) BASIC24.51■■□□□ 1.51
Sh3d21Q7TSG5 Trappc6b-201ENSMUST00000021380 1255 ntAPPRIS P1 TSL 1 (best) BASIC24.51■■□□□ 1.51
Sh3d21Q7TSG5 1110008P14Rik-201ENSMUST00000048792 680 ntAPPRIS P1 TSL 1 (best) BASIC24.51■■□□□ 1.51
Sh3d21Q7TSG5 Stambp-207ENSMUST00000206592 2152 ntAPPRIS P1 TSL 1 (best) BASIC24.51■■□□□ 1.51
Sh3d21Q7TSG5 Ltb4r1-201ENSMUST00000057569 1394 ntAPPRIS P1 TSL 1 (best) BASIC24.51■■□□□ 1.51
Sh3d21Q7TSG5 Olfm2-203ENSMUST00000215999 1895 ntAPPRIS ALT2 TSL 3 BASIC24.5■■□□□ 1.51
Sh3d21Q7TSG5 Onecut3-201ENSMUST00000051773 4776 ntAPPRIS P1 TSL 1 (best) BASIC24.5■■□□□ 1.51
Sh3d21Q7TSG5 Fam168b-203ENSMUST00000167518 5058 ntTSL 5 BASIC24.5■■□□□ 1.51
Sh3d21Q7TSG5 Hoxb3-201ENSMUST00000055334 1890 ntAPPRIS P1 TSL 1 (best) BASIC24.49■■□□□ 1.51
Sh3d21Q7TSG5 Fbl-201ENSMUST00000042405 1197 ntAPPRIS P1 TSL 1 (best) BASIC24.49■■□□□ 1.51
Sh3d21Q7TSG5 Terc-201ENSMUST00000082862 423 ntBASIC24.49■■□□□ 1.51
Sh3d21Q7TSG5 Hecw2-202ENSMUST00000097741 1132 ntTSL 1 (best) BASIC24.49■■□□□ 1.51
Sh3d21Q7TSG5 Fads2-201ENSMUST00000025567 1508 ntAPPRIS P1 TSL 1 (best) BASIC24.49■■□□□ 1.51
Sh3d21Q7TSG5 Gm5784-202ENSMUST00000220896 2016 ntTSL 1 (best) BASIC24.49■■□□□ 1.51
Sh3d21Q7TSG5 H1f0-201ENSMUST00000180086 2287 ntAPPRIS P1 BASIC24.49■■□□□ 1.51
Sh3d21Q7TSG5 Sh3d21-202ENSMUST00000097891 2384 ntAPPRIS P1 TSL 1 (best) BASIC24.49■■□□□ 1.51
Sh3d21Q7TSG5 Rarres1-201ENSMUST00000054825 1325 ntAPPRIS P1 TSL 1 (best) BASIC24.48■■□□□ 1.51
Sh3d21Q7TSG5 Mypop-201ENSMUST00000059331 2173 ntAPPRIS P1 TSL 5 BASIC24.47■■□□□ 1.51
Sh3d21Q7TSG5 Ube2g2-204ENSMUST00000174510 2031 ntAPPRIS P1 TSL 1 (best) BASIC24.47■■□□□ 1.51
Sh3d21Q7TSG5 Neurl4-211ENSMUST00000177138 4886 ntAPPRIS ALT2 TSL 1 (best) BASIC24.47■■□□□ 1.51
Sh3d21Q7TSG5 Slc22a17-201ENSMUST00000050772 2290 ntTSL 1 (best) BASIC24.47■■□□□ 1.51
Sh3d21Q7TSG5 Kcnj6-201ENSMUST00000095873 1773 ntTSL 1 (best) BASIC24.47■■□□□ 1.51
Sh3d21Q7TSG5 Syndig1l-201ENSMUST00000095550 2524 ntAPPRIS P1 TSL 1 (best) BASIC24.46■■□□□ 1.51
Sh3d21Q7TSG5 Cd320-201ENSMUST00000002379 2209 ntAPPRIS P3 TSL 1 (best) BASIC24.46■■□□□ 1.51
Sh3d21Q7TSG5 Hgh1-201ENSMUST00000023213 1959 ntAPPRIS P1 TSL 1 (best) BASIC24.46■■□□□ 1.51
Sh3d21Q7TSG5 Paqr6-203ENSMUST00000147948 837 ntTSL 2 BASIC24.46■■□□□ 1.51
Sh3d21Q7TSG5 Smagp-202ENSMUST00000172334 952 ntAPPRIS P1 TSL 2 BASIC24.46■■□□□ 1.51
Sh3d21Q7TSG5 Ddx43-201ENSMUST00000113367 2207 ntAPPRIS P1 TSL 5 BASIC24.46■■□□□ 1.51
Sh3d21Q7TSG5 Rab21-201ENSMUST00000020343 4602 ntAPPRIS P1 TSL 1 (best) BASIC24.46■■□□□ 1.51
Sh3d21Q7TSG5 Hook1-202ENSMUST00000107083 1506 ntTSL 1 (best) BASIC24.45■■□□□ 1.51
Sh3d21Q7TSG5 Crlf2-201ENSMUST00000044579 1323 ntAPPRIS P3 TSL 1 (best) BASIC24.45■■□□□ 1.5
Sh3d21Q7TSG5 Nckap5los-201ENSMUST00000159738 1712 ntTSL 2 BASIC24.45■■□□□ 1.5
Sh3d21Q7TSG5 Crct1-201ENSMUST00000029521 718 ntAPPRIS P1 TSL 1 (best) BASIC24.45■■□□□ 1.5
Sh3d21Q7TSG5 Vps37b-201ENSMUST00000040967 2522 ntAPPRIS P1 TSL 1 (best) BASIC24.45■■□□□ 1.5
Sh3d21Q7TSG5 Ccdc142-201ENSMUST00000101254 2317 ntAPPRIS P1 TSL 5 BASIC24.45■■□□□ 1.5
Sh3d21Q7TSG5 Efhd2-201ENSMUST00000036854 2381 ntAPPRIS P1 TSL 1 (best) BASIC24.44■■□□□ 1.5
Sh3d21Q7TSG5 Gm16286-202ENSMUST00000125127 1683 ntAPPRIS P1 TSL 1 (best) BASIC24.44■■□□□ 1.5
Sh3d21Q7TSG5 4930597O21Rik-201ENSMUST00000065878 984 ntTSL 1 (best) BASIC24.44■■□□□ 1.5
Sh3d21Q7TSG5 Tmem192-202ENSMUST00000079896 916 ntTSL 1 (best) BASIC24.44■■□□□ 1.5
Sh3d21Q7TSG5 Hacd1-202ENSMUST00000091429 871 ntTSL 1 (best) BASIC24.44■■□□□ 1.5
Sh3d21Q7TSG5 1810026B05Rik-203ENSMUST00000184587 5738 ntTSL 1 (best) BASIC24.43■■□□□ 1.5
Sh3d21Q7TSG5 Mlycd-201ENSMUST00000098367 2128 ntAPPRIS P1 TSL 1 (best) BASIC24.43■■□□□ 1.5
Sh3d21Q7TSG5 Qk-201ENSMUST00000042296 6718 ntTSL 1 (best) BASIC24.43■■□□□ 1.5
Sh3d21Q7TSG5 Dcun1d5-201ENSMUST00000034499 1122 ntTSL 1 (best) BASIC24.43■■□□□ 1.5
Sh3d21Q7TSG5 Ndufs3-201ENSMUST00000005647 1046 ntAPPRIS P1 TSL 1 (best) BASIC24.43■■□□□ 1.5
Sh3d21Q7TSG5 Fance-203ENSMUST00000114803 1980 ntTSL 1 (best) BASIC24.43■■□□□ 1.5
Sh3d21Q7TSG5 Gm21989-201ENSMUST00000174530 1609 ntTSL 1 (best) BASIC24.43■■□□□ 1.5
Sh3d21Q7TSG5 Srcap-210ENSMUST00000188124 2048 ntTSL 1 (best) BASIC24.42■■□□□ 1.5
Sh3d21Q7TSG5 Gm15918-201ENSMUST00000137259 689 ntTSL 3 BASIC24.42■■□□□ 1.5
Sh3d21Q7TSG5 Asf1a-205ENSMUST00000219282 1150 ntTSL 5 BASIC24.42■■□□□ 1.5
Sh3d21Q7TSG5 Ubp1-204ENSMUST00000214095 2320 ntAPPRIS ALT1 TSL 1 (best) BASIC24.42■■□□□ 1.5
Sh3d21Q7TSG5 Ube2k-203ENSMUST00000201266 1449 ntTSL 5 BASIC24.42■■□□□ 1.5
Sh3d21Q7TSG5 Pdcd4-201ENSMUST00000025931 2330 ntAPPRIS P1 TSL 1 (best) BASIC24.41■■□□□ 1.5
Sh3d21Q7TSG5 2610307P16Rik-205ENSMUST00000148885 1870 ntTSL 1 (best) BASIC24.41■■□□□ 1.5
Sh3d21Q7TSG5 Hist2h3c1-201ENSMUST00000176059 1820 ntAPPRIS P1 BASIC24.41■■□□□ 1.5
Sh3d21Q7TSG5 Hist2h3c1-202ENSMUST00000177796 1825 ntBASIC24.41■■□□□ 1.5
Sh3d21Q7TSG5 Sntb1-202ENSMUST00000110200 1225 ntTSL 1 (best) BASIC24.41■■□□□ 1.5
Sh3d21Q7TSG5 Cadps-204ENSMUST00000177814 5461 ntAPPRIS ALT2 TSL 5 BASIC24.4■■□□□ 1.5
Sh3d21Q7TSG5 Thap8-202ENSMUST00000108187 1184 ntAPPRIS P5 TSL 2 BASIC24.4■■□□□ 1.5
Sh3d21Q7TSG5 Scarna2-201ENSMUST00000157560 414 ntBASIC24.4■■□□□ 1.5
Sh3d21Q7TSG5 Gm9910-201ENSMUST00000195385 1550 ntBASIC24.4■■□□□ 1.5
Sh3d21Q7TSG5 Gng3-201ENSMUST00000096259 1699 ntAPPRIS P1 TSL 1 (best) BASIC24.4■■□□□ 1.5
Sh3d21Q7TSG5 Dbp-201ENSMUST00000080885 1837 ntAPPRIS P1 TSL 1 (best) BASIC24.4■■□□□ 1.5
Sh3d21Q7TSG5 D130020L05Rik-201ENSMUST00000180800 2431 ntTSL 1 (best) BASIC24.4■■□□□ 1.5
Sh3d21Q7TSG5 Grin2d-203ENSMUST00000211713 5244 ntAPPRIS P1 TSL 5 BASIC24.39■■□□□ 1.5
Sh3d21Q7TSG5 Ccsap-201ENSMUST00000034452 2390 ntAPPRIS P1 TSL 1 (best) BASIC24.39■■□□□ 1.5
Sh3d21Q7TSG5 Lemd3-202ENSMUST00000119944 4743 ntAPPRIS P2 TSL 1 (best) BASIC24.39■■□□□ 1.5
Sh3d21Q7TSG5 Porcn-201ENSMUST00000077595 1872 ntAPPRIS P4 TSL 1 (best) BASIC24.38■■□□□ 1.49
Sh3d21Q7TSG5 Porcn-204ENSMUST00000089403 1854 ntAPPRIS ALT1 TSL 1 (best) BASIC24.38■■□□□ 1.49
Sh3d21Q7TSG5 Slc30a3-201ENSMUST00000031037 2089 ntAPPRIS P1 TSL 1 (best) BASIC24.38■■□□□ 1.49
Sh3d21Q7TSG5 Olfm1-201ENSMUST00000028177 2757 ntAPPRIS P1 TSL 1 (best) BASIC24.37■■□□□ 1.49
Sh3d21Q7TSG5 Gm9806-201ENSMUST00000051080 552 ntBASIC24.37■■□□□ 1.49
Sh3d21Q7TSG5 Tmem158-201ENSMUST00000068140 1712 ntAPPRIS P1 BASIC24.37■■□□□ 1.49
Sh3d21Q7TSG5 Gimap1-205ENSMUST00000204168 1469 ntAPPRIS P1 TSL 1 (best) BASIC24.37■■□□□ 1.49
Sh3d21Q7TSG5 Arx-202ENSMUST00000113947 2454 ntAPPRIS P1 TSL 1 (best) BASIC24.37■■□□□ 1.49
Sh3d21Q7TSG5 Mppe1-201ENSMUST00000073054 2007 ntAPPRIS P1 TSL 1 (best) BASIC24.37■■□□□ 1.49
Sh3d21Q7TSG5 Micu2-201ENSMUST00000022543 2329 ntAPPRIS P1 TSL 1 (best) BASIC24.36■■□□□ 1.49
Sh3d21Q7TSG5 Prrx2-201ENSMUST00000041659 1441 ntAPPRIS P2 TSL 1 (best) BASIC24.36■■□□□ 1.49
Sh3d21Q7TSG5 2410022M11Rik-201ENSMUST00000186474 1911 ntBASIC24.36■■□□□ 1.49
Sh3d21Q7TSG5 Stbd1-202ENSMUST00000200941 523 ntTSL 1 (best) BASIC24.36■■□□□ 1.49
Sh3d21Q7TSG5 A530095I07Rik-201ENSMUST00000070942 847 ntTSL 1 (best) BASIC24.36■■□□□ 1.49
Sh3d21Q7TSG5 Adgrb1-202ENSMUST00000170845 2704 ntTSL 5 BASIC24.36■■□□□ 1.49
Sh3d21Q7TSG5 Oaz2-206ENSMUST00000153700 1843 ntAPPRIS P2 TSL 5 BASIC24.35■■□□□ 1.49
Sh3d21Q7TSG5 Kctd5-201ENSMUST00000017090 2443 ntAPPRIS P1 TSL 1 (best) BASIC24.35■■□□□ 1.49
Sh3d21Q7TSG5 Il17rd-202ENSMUST00000223942 2186 ntBASIC24.35■■□□□ 1.49
Sh3d21Q7TSG5 Abhd17c-201ENSMUST00000117085 2238 ntAPPRIS P1 TSL 1 (best) BASIC24.35■■□□□ 1.49
Sh3d21Q7TSG5 Prr5-202ENSMUST00000171460 1719 ntAPPRIS ALT2 TSL 1 (best) BASIC24.35■■□□□ 1.49
Sh3d21Q7TSG5 Agap3-201ENSMUST00000024123 3207 ntAPPRIS P1 TSL 1 (best) BASIC24.34■■□□□ 1.49
Sh3d21Q7TSG5 Hdac1-201ENSMUST00000102597 2038 ntAPPRIS P1 TSL 1 (best) BASIC24.34■■□□□ 1.49
Sh3d21Q7TSG5 Dnajc19-202ENSMUST00000108195 659 ntAPPRIS P1 TSL 1 (best) BASIC24.34■■□□□ 1.49
Sh3d21Q7TSG5 Dleu2-204ENSMUST00000182286 666 ntTSL 2 BASIC24.34■■□□□ 1.49
Sh3d21Q7TSG5 Dleu2-213ENSMUST00000183245 637 ntTSL 1 (best) BASIC24.34■■□□□ 1.49
Retrieved 100 of 76,532 protein–RNA pairs in 15.7 ms