Protein–RNA interactions for Protein: Q7TNK1

Rfx4, Transcription factor RFX4, mousemouse

Predictions only

Length 735 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rfx4Q7TNK1 Gm9887-201ENSMUST00000053451 624 ntAPPRIS P1 BASIC21.62■■□□□ 1.05
Rfx4Q7TNK1 Ccnl2-201ENSMUST00000030944 2442 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
Rfx4Q7TNK1 Ing2-201ENSMUST00000080353 2812 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
Rfx4Q7TNK1 Krt10-201ENSMUST00000103131 2094 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
Rfx4Q7TNK1 Chst14-201ENSMUST00000099546 2090 ntAPPRIS P1 BASIC21.62■■□□□ 1.05
Rfx4Q7TNK1 Acot3-202ENSMUST00000120927 1854 ntAPPRIS ALT2 TSL 1 (best) BASIC21.61■■□□□ 1.05
Rfx4Q7TNK1 Stard3nl-210ENSMUST00000222869 1030 ntTSL 5 BASIC21.61■■□□□ 1.05
Rfx4Q7TNK1 A230087F16Rik-201ENSMUST00000181055 2098 ntTSL 1 (best) BASIC21.6■■□□□ 1.05
Rfx4Q7TNK1 Npas1-201ENSMUST00000002053 2091 ntAPPRIS P1 TSL 5 BASIC21.6■■□□□ 1.05
Rfx4Q7TNK1 Ppp4r2-201ENSMUST00000063854 4874 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
Rfx4Q7TNK1 Gm24970-201ENSMUST00000175582 82 ntBASIC21.6■■□□□ 1.05
Rfx4Q7TNK1 Dgat2-201ENSMUST00000033001 2262 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
Rfx4Q7TNK1 Bckdhb-201ENSMUST00000034801 1472 ntAPPRIS P3 TSL 1 (best) BASIC21.59■■□□□ 1.05
Rfx4Q7TNK1 B230208H11Rik-201ENSMUST00000180529 1112 ntTSL 1 (best) BASIC21.59■■□□□ 1.05
Rfx4Q7TNK1 Zfp131-205ENSMUST00000223812 663 ntBASIC21.59■■□□□ 1.05
Rfx4Q7TNK1 Gm6934-201ENSMUST00000194780 1905 ntBASIC21.59■■□□□ 1.05
Rfx4Q7TNK1 Mlycd-201ENSMUST00000098367 2128 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.05
Rfx4Q7TNK1 1810026B05Rik-206ENSMUST00000187421 519 ntTSL 3 BASIC21.58■■□□□ 1.05
Rfx4Q7TNK1 Nrarp-201ENSMUST00000104999 2582 ntAPPRIS P1 BASIC21.58■■□□□ 1.04
Rfx4Q7TNK1 H2afy-201ENSMUST00000016081 2046 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.04
Rfx4Q7TNK1 Mta3-204ENSMUST00000112352 2674 ntAPPRIS ALT2 TSL 1 (best) BASIC21.58■■□□□ 1.04
Rfx4Q7TNK1 Gmeb1-202ENSMUST00000105964 1925 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
Rfx4Q7TNK1 Ccdc122-201ENSMUST00000048208 1721 ntAPPRIS P3 TSL 1 (best) BASIC21.57■■□□□ 1.04
Rfx4Q7TNK1 Tmem158-201ENSMUST00000068140 1712 ntAPPRIS P1 BASIC21.57■■□□□ 1.04
Rfx4Q7TNK1 Kcnc3-201ENSMUST00000107906 5062 ntAPPRIS ALT2 TSL 1 (best) BASIC21.57■■□□□ 1.04
Rfx4Q7TNK1 Notum-202ENSMUST00000106177 2212 ntAPPRIS P1 TSL 5 BASIC21.56■■□□□ 1.04
Rfx4Q7TNK1 Flot2-201ENSMUST00000072289 2621 ntAPPRIS P2 TSL 1 (best) BASIC21.56■■□□□ 1.04
Rfx4Q7TNK1 Tmem243-201ENSMUST00000115365 1040 ntAPPRIS P1 TSL 2 BASIC21.56■■□□□ 1.04
Rfx4Q7TNK1 Gm13042-201ENSMUST00000119244 1955 ntBASIC21.56■■□□□ 1.04
Rfx4Q7TNK1 Pitx2-202ENSMUST00000042587 2271 ntAPPRIS ALT1 TSL 1 (best) BASIC21.55■■□□□ 1.04
Rfx4Q7TNK1 Mnx1-202ENSMUST00000165512 2245 ntAPPRIS P2 TSL 1 (best) BASIC21.55■■□□□ 1.04
Rfx4Q7TNK1 1700016A09Rik-201ENSMUST00000192004 835 ntBASIC21.55■■□□□ 1.04
Rfx4Q7TNK1 AC117232.3-201ENSMUST00000217817 338 ntTSL 2 BASIC21.55■■□□□ 1.04
Rfx4Q7TNK1 Arpc2-203ENSMUST00000113820 1439 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
Rfx4Q7TNK1 Zfp513-201ENSMUST00000031562 2213 ntTSL 1 (best) BASIC21.53■■□□□ 1.04
Rfx4Q7TNK1 Hibadh-201ENSMUST00000031788 1825 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
Rfx4Q7TNK1 Dlx6os2-201ENSMUST00000178206 1354 ntBASIC21.53■■□□□ 1.04
Rfx4Q7TNK1 Spire2-201ENSMUST00000010298 2330 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
Rfx4Q7TNK1 Agps-202ENSMUST00000111952 2589 ntTSL 2 BASIC21.52■■□□□ 1.04
Rfx4Q7TNK1 Gemin7-202ENSMUST00000117222 1023 ntAPPRIS P1 TSL 2 BASIC21.52■■□□□ 1.04
Rfx4Q7TNK1 Ccdc50-202ENSMUST00000096127 1096 ntTSL 1 (best) BASIC21.52■■□□□ 1.04
Rfx4Q7TNK1 Vmac-201ENSMUST00000067931 2174 ntAPPRIS P3 TSL 1 (best) BASIC21.52■■□□□ 1.04
Rfx4Q7TNK1 Nt5c3-201ENSMUST00000031793 1676 ntAPPRIS P3 TSL 1 (best) BASIC21.52■■□□□ 1.04
Rfx4Q7TNK1 Slc25a1-201ENSMUST00000003622 1678 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
Rfx4Q7TNK1 Manf-202ENSMUST00000159283 2247 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
Rfx4Q7TNK1 Trim9-208ENSMUST00000221370 2393 ntTSL 1 (best) BASIC21.52■■□□□ 1.04
Rfx4Q7TNK1 Dcbld2-201ENSMUST00000046663 6561 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.03
Rfx4Q7TNK1 Kctd5-201ENSMUST00000017090 2443 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
Rfx4Q7TNK1 BC037034-205ENSMUST00000159649 2093 ntTSL 1 (best) BASIC21.51■■□□□ 1.03
Rfx4Q7TNK1 Ccnyl1-203ENSMUST00000187170 1506 ntAPPRIS P1 TSL 5 BASIC21.51■■□□□ 1.03
Rfx4Q7TNK1 Phf23-201ENSMUST00000018716 2006 ntAPPRIS P3 TSL 1 (best) BASIC21.51■■□□□ 1.03
Rfx4Q7TNK1 Snx7-201ENSMUST00000029639 2021 ntAPPRIS P2 TSL 1 (best) BASIC21.51■■□□□ 1.03
Rfx4Q7TNK1 Zcchc11-201ENSMUST00000043368 6054 ntAPPRIS P2 TSL 5 BASIC21.51■■□□□ 1.03
Rfx4Q7TNK1 Kcnc3-203ENSMUST00000207493 2731 ntAPPRIS ALT2 TSL 5 BASIC21.5■■□□□ 1.03
Rfx4Q7TNK1 Pax1-201ENSMUST00000109968 2643 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
Rfx4Q7TNK1 Gtpbp6-201ENSMUST00000077220 1617 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
Rfx4Q7TNK1 Dmrt3-201ENSMUST00000048935 2390 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
Rfx4Q7TNK1 Arl8a-201ENSMUST00000027684 1713 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
Rfx4Q7TNK1 Triobp-201ENSMUST00000109687 2570 ntAPPRIS ALT2 TSL 1 (best) BASIC21.48■■□□□ 1.03
Rfx4Q7TNK1 Gm9397-201ENSMUST00000200125 605 ntBASIC21.48■■□□□ 1.03
Rfx4Q7TNK1 Cntln-202ENSMUST00000102819 2239 ntAPPRIS P3 TSL 1 (best) BASIC21.48■■□□□ 1.03
Rfx4Q7TNK1 Lemd3-202ENSMUST00000119944 4743 ntAPPRIS P2 TSL 1 (best) BASIC21.48■■□□□ 1.03
Rfx4Q7TNK1 Cnot6-201ENSMUST00000020624 2498 ntTSL 1 (best) BASIC21.48■■□□□ 1.03
Rfx4Q7TNK1 2700081O15Rik-202ENSMUST00000159348 4989 ntAPPRIS P1 TSL 5 BASIC21.48■■□□□ 1.03
Rfx4Q7TNK1 3110021N24Rik-201ENSMUST00000178992 1812 ntAPPRIS P1 TSL 5 BASIC21.48■■□□□ 1.03
Rfx4Q7TNK1 Ttc7b-201ENSMUST00000062957 3446 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
Rfx4Q7TNK1 Rab3il1-202ENSMUST00000117641 2004 ntAPPRIS ALT2 TSL 1 (best) BASIC21.47■■□□□ 1.03
Rfx4Q7TNK1 Sdccag3-201ENSMUST00000028293 2031 ntAPPRIS ALT2 TSL 1 (best) BASIC21.47■■□□□ 1.03
Rfx4Q7TNK1 Hdac3-201ENSMUST00000043498 2004 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
Rfx4Q7TNK1 Osbpl1a-209ENSMUST00000122175 1203 ntTSL 1 (best) BASIC21.47■■□□□ 1.03
Rfx4Q7TNK1 Fip1l1-202ENSMUST00000113534 2140 ntAPPRIS ALT2 TSL 1 (best) BASIC21.47■■□□□ 1.03
Rfx4Q7TNK1 Picalm-205ENSMUST00000207225 3489 ntTSL 1 (best) BASIC21.47■■□□□ 1.03
Rfx4Q7TNK1 Adgrb1-202ENSMUST00000170845 2704 ntTSL 5 BASIC21.47■■□□□ 1.03
Rfx4Q7TNK1 Peli3-201ENSMUST00000025834 1971 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
Rfx4Q7TNK1 Paqr3-203ENSMUST00000112969 2257 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
Rfx4Q7TNK1 Prph-201ENSMUST00000024249 1769 ntAPPRIS ALT2 TSL 1 (best) BASIC21.46■■□□□ 1.03
Rfx4Q7TNK1 Cbln1-202ENSMUST00000169693 1699 ntAPPRIS P1 TSL 5 BASIC21.45■■□□□ 1.02
Rfx4Q7TNK1 Antxr1-204ENSMUST00000204805 2156 ntAPPRIS ALT2 TSL 5 BASIC21.45■■□□□ 1.02
Rfx4Q7TNK1 Rundc3a-203ENSMUST00000107103 1822 ntTSL 5 BASIC21.45■■□□□ 1.02
Rfx4Q7TNK1 Slc30a3-201ENSMUST00000031037 2089 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
Rfx4Q7TNK1 Slc15a4-201ENSMUST00000031367 2732 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
Rfx4Q7TNK1 Qk-201ENSMUST00000042296 6718 ntTSL 1 (best) BASIC21.44■■□□□ 1.02
Rfx4Q7TNK1 Qrich1-209ENSMUST00000194385 975 ntTSL 2 BASIC21.44■■□□□ 1.02
Rfx4Q7TNK1 Hey1-201ENSMUST00000042412 2423 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
Rfx4Q7TNK1 Syce2-202ENSMUST00000136026 1686 ntAPPRIS P3 TSL 1 (best) BASIC21.44■■□□□ 1.02
Rfx4Q7TNK1 St7-209ENSMUST00000115420 2094 ntTSL 5 BASIC21.43■■□□□ 1.02
Rfx4Q7TNK1 Dpysl3-201ENSMUST00000025379 2106 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
Rfx4Q7TNK1 Map2k7-207ENSMUST00000110999 1578 ntTSL 1 (best) BASIC21.43■■□□□ 1.02
Rfx4Q7TNK1 Serpinb6a-201ENSMUST00000017188 1504 ntTSL 1 (best) BASIC21.42■■□□□ 1.02
Rfx4Q7TNK1 1810026B05Rik-202ENSMUST00000184554 782 ntTSL 3 BASIC21.42■■□□□ 1.02
Rfx4Q7TNK1 Dmtn-209ENSMUST00000228295 2572 ntBASIC21.42■■□□□ 1.02
Rfx4Q7TNK1 Ptbp3-208ENSMUST00000172768 2147 ntAPPRIS ALT2 TSL 5 BASIC21.41■■□□□ 1.02
Rfx4Q7TNK1 Hand2-201ENSMUST00000040104 2351 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
Rfx4Q7TNK1 Yy1-201ENSMUST00000021692 6178 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
Rfx4Q7TNK1 Kcnj12-202ENSMUST00000089184 2291 ntAPPRIS P3 TSL 1 (best) BASIC21.4■■□□□ 1.02
Rfx4Q7TNK1 Eml4-201ENSMUST00000049503 5109 ntAPPRIS P3 TSL 1 (best) BASIC21.4■■□□□ 1.02
Rfx4Q7TNK1 Taf4-204ENSMUST00000227325 4380 ntAPPRIS ALT2 BASIC21.39■■□□□ 1.02
Rfx4Q7TNK1 Ppm1g-205ENSMUST00000202294 1868 ntTSL 5 BASIC21.39■■□□□ 1.02
Rfx4Q7TNK1 Gm26766-202ENSMUST00000227544 2347 ntBASIC21.39■■□□□ 1.02
Rfx4Q7TNK1 Nipa1-201ENSMUST00000052204 3183 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.02
Retrieved 100 of 76,532 protein–RNA pairs in 30.3 ms