Protein–RNA interactions for Protein: Q6PFC5

Lrit2, Leucine-rich repeat, immunoglobulin-like domain and transmembrane domain-containing protein 2, mousemouse

Predictions only

Length 549 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lrit2Q6PFC5 Nrsn1-201ENSMUST00000057866 2222 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
Lrit2Q6PFC5 Cox4i1-205ENSMUST00000181586 765 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
Lrit2Q6PFC5 Gm43573-201ENSMUST00000196445 570 ntTSL 5 BASIC21.27■■□□□ 1
Lrit2Q6PFC5 AC151971.4-201ENSMUST00000214717 704 ntBASIC21.27■■□□□ 1
Lrit2Q6PFC5 Dusp22-201ENSMUST00000091672 1161 ntAPPRIS ALT2 TSL 1 (best) BASIC21.27■■□□□ 1
Lrit2Q6PFC5 E2f1-201ENSMUST00000000894 2755 ntAPPRIS ALT2 TSL 1 (best) BASIC21.27■■□□□ 1
Lrit2Q6PFC5 Ei24-202ENSMUST00000163192 2309 ntAPPRIS P1 TSL 1 (best) BASIC21.27■□□□□ 0.99
Lrit2Q6PFC5 Oaz2-206ENSMUST00000153700 1843 ntAPPRIS P2 TSL 5 BASIC21.27■□□□□ 0.99
Lrit2Q6PFC5 Asf1a-201ENSMUST00000020004 2201 ntAPPRIS P1 TSL 1 (best) BASIC21.27■□□□□ 0.99
Lrit2Q6PFC5 Slc35a2-211ENSMUST00000208640 486 ntTSL 5 BASIC21.26■□□□□ 0.99
Lrit2Q6PFC5 Sdccag3-202ENSMUST00000077983 1955 ntAPPRIS ALT2 TSL 1 (best) BASIC21.26■□□□□ 0.99
Lrit2Q6PFC5 Dennd5a-202ENSMUST00000106722 4862 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
Lrit2Q6PFC5 Gm45713-201ENSMUST00000209467 1477 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
Lrit2Q6PFC5 Cadm1-206ENSMUST00000143026 1643 ntTSL 5 BASIC21.26■□□□□ 0.99
Lrit2Q6PFC5 Gm14523-201ENSMUST00000117260 558 ntBASIC21.25■□□□□ 0.99
Lrit2Q6PFC5 Prph-202ENSMUST00000047104 1865 ntAPPRIS P3 TSL 1 (best) BASIC21.25■□□□□ 0.99
Lrit2Q6PFC5 Rnaset2a-201ENSMUST00000097420 1259 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
Lrit2Q6PFC5 Slc44a1-203ENSMUST00000107646 1974 ntTSL 5 BASIC21.25■□□□□ 0.99
Lrit2Q6PFC5 Hist2h3c1-201ENSMUST00000176059 1820 ntAPPRIS P1 BASIC21.25■□□□□ 0.99
Lrit2Q6PFC5 Hist2h3c1-202ENSMUST00000177796 1825 ntBASIC21.25■□□□□ 0.99
Lrit2Q6PFC5 Kcnq5-206ENSMUST00000173404 2775 ntAPPRIS ALT2 TSL 5 BASIC21.24■□□□□ 0.99
Lrit2Q6PFC5 Kcnj6-201ENSMUST00000095873 1773 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
Lrit2Q6PFC5 4933429H19Rik-202ENSMUST00000187361 995 ntBASIC21.24■□□□□ 0.99
Lrit2Q6PFC5 Dbndd2-202ENSMUST00000069385 1658 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
Lrit2Q6PFC5 Gm44428-201ENSMUST00000204474 874 ntBASIC21.23■□□□□ 0.99
Lrit2Q6PFC5 Nans-201ENSMUST00000030018 2179 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
Lrit2Q6PFC5 Tsen34-204ENSMUST00000108630 1779 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
Lrit2Q6PFC5 Tmem260-208ENSMUST00000226400 2281 ntAPPRIS ALT2 BASIC21.22■□□□□ 0.99
Lrit2Q6PFC5 Gm7332-201ENSMUST00000118351 454 ntBASIC21.22■□□□□ 0.99
Lrit2Q6PFC5 Rasgef1c-203ENSMUST00000093142 2216 ntAPPRIS P3 TSL 1 (best) BASIC21.22■□□□□ 0.99
Lrit2Q6PFC5 Gm20458-201ENSMUST00000164863 1369 ntAPPRIS P1 TSL 5 BASIC21.22■□□□□ 0.99
Lrit2Q6PFC5 Kiss1-201ENSMUST00000007433 779 ntAPPRIS P1 TSL 2 BASIC21.21■□□□□ 0.99
Lrit2Q6PFC5 Peg12-201ENSMUST00000094339 2640 ntAPPRIS P1 BASIC21.21■□□□□ 0.99
Lrit2Q6PFC5 Gm26711-201ENSMUST00000180866 1833 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
Lrit2Q6PFC5 Tlx2-202ENSMUST00000174674 1514 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
Lrit2Q6PFC5 Fzd9-201ENSMUST00000062572 2293 ntAPPRIS P1 BASIC21.2■□□□□ 0.98
Lrit2Q6PFC5 Snta1-201ENSMUST00000028991 2125 ntAPPRIS ALT2 TSL 1 (best) BASIC21.2■□□□□ 0.98
Lrit2Q6PFC5 Usf1-210ENSMUST00000167546 1822 ntAPPRIS P1 TSL 5 BASIC21.2■□□□□ 0.98
Lrit2Q6PFC5 Efcc1-202ENSMUST00000159570 2293 ntAPPRIS P2 TSL 5 BASIC21.2■□□□□ 0.98
Lrit2Q6PFC5 Tspan33-202ENSMUST00000115250 1977 ntAPPRIS ALT1 TSL 1 (best) BASIC21.19■□□□□ 0.98
Lrit2Q6PFC5 Ttc9-201ENSMUST00000036116 2042 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
Lrit2Q6PFC5 Fam220a-201ENSMUST00000067145 2198 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
Lrit2Q6PFC5 Slc16a11-201ENSMUST00000094055 1788 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
Lrit2Q6PFC5 Gm13594-201ENSMUST00000137582 476 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
Lrit2Q6PFC5 Hdac2-201ENSMUST00000019911 2005 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
Lrit2Q6PFC5 Mxra7-201ENSMUST00000021170 2063 ntAPPRIS P3 TSL 1 (best) BASIC21.19■□□□□ 0.98
Lrit2Q6PFC5 Gas2l1-201ENSMUST00000037146 2686 ntAPPRIS ALT2 TSL 1 (best) BASIC21.18■□□□□ 0.98
Lrit2Q6PFC5 Trnau1ap-203ENSMUST00000105962 961 ntTSL 5 BASIC21.17■□□□□ 0.98
Lrit2Q6PFC5 Erf-202ENSMUST00000116343 690 ntAPPRIS ALT2 TSL 2 BASIC21.17■□□□□ 0.98
Lrit2Q6PFC5 Zdhhc2-205ENSMUST00000167766 1759 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
Lrit2Q6PFC5 Otud5-205ENSMUST00000115668 2543 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
Lrit2Q6PFC5 Tmem11-201ENSMUST00000062677 1457 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
Lrit2Q6PFC5 Ipmk-202ENSMUST00000118381 1323 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
Lrit2Q6PFC5 Hnrnpk-210ENSMUST00000176558 1053 ntTSL 2 BASIC21.16■□□□□ 0.98
Lrit2Q6PFC5 Rpl35-201ENSMUST00000080861 946 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
Lrit2Q6PFC5 Snta1-202ENSMUST00000109728 2131 ntAPPRIS P2 TSL 1 (best) BASIC21.16■□□□□ 0.98
Lrit2Q6PFC5 B230377A18Rik-202ENSMUST00000192921 1364 ntBASIC21.15■□□□□ 0.98
Lrit2Q6PFC5 Mbd3-203ENSMUST00000105348 1222 ntTSL 5 BASIC21.15■□□□□ 0.98
Lrit2Q6PFC5 Ppp2r3d-202ENSMUST00000180270 450 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
Lrit2Q6PFC5 Tmem170b-202ENSMUST00000221694 602 ntTSL 3 BASIC21.15■□□□□ 0.98
Lrit2Q6PFC5 Amigo1-201ENSMUST00000050909 5030 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
Lrit2Q6PFC5 Ei24-201ENSMUST00000115086 2220 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.98
Lrit2Q6PFC5 St7-205ENSMUST00000081635 2115 ntTSL 1 (best) BASIC21.14■□□□□ 0.98
Lrit2Q6PFC5 Dnajc21-201ENSMUST00000136591 2060 ntAPPRIS P1 TSL 5 BASIC21.14■□□□□ 0.98
Lrit2Q6PFC5 Gm38287-201ENSMUST00000195193 2051 ntTSL 3 BASIC21.14■□□□□ 0.98
Lrit2Q6PFC5 Cadps-201ENSMUST00000067491 5421 ntAPPRIS P4 TSL 1 (best) BASIC21.14■□□□□ 0.98
Lrit2Q6PFC5 Nudt3-203ENSMUST00000114886 996 ntTSL 2 BASIC21.14■□□□□ 0.97
Lrit2Q6PFC5 Olfm2-203ENSMUST00000215999 1895 ntAPPRIS ALT2 TSL 3 BASIC21.13■□□□□ 0.97
Lrit2Q6PFC5 Lpcat4-201ENSMUST00000028554 2275 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
Lrit2Q6PFC5 Kcnip2-208ENSMUST00000161886 693 ntAPPRIS P3 TSL 1 (best) BASIC21.13■□□□□ 0.97
Lrit2Q6PFC5 A030014E15Rik-201ENSMUST00000223400 796 ntAPPRIS P1 BASIC21.13■□□□□ 0.97
Lrit2Q6PFC5 Rnf39-201ENSMUST00000040498 1579 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
Lrit2Q6PFC5 Znrf2-201ENSMUST00000079869 5886 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
Lrit2Q6PFC5 Nhlrc1-201ENSMUST00000052747 2294 ntAPPRIS P1 BASIC21.12■□□□□ 0.97
Lrit2Q6PFC5 Tmem106c-201ENSMUST00000064200 1635 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
Lrit2Q6PFC5 Heca-201ENSMUST00000037879 5098 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
Lrit2Q6PFC5 Tmem240-202ENSMUST00000147721 817 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
Lrit2Q6PFC5 Lsm4-205ENSMUST00000210987 636 ntTSL 5 BASIC21.12■□□□□ 0.97
Lrit2Q6PFC5 Epop-201ENSMUST00000052281 2314 ntAPPRIS P1 BASIC21.12■□□□□ 0.97
Lrit2Q6PFC5 Lrrc4b-201ENSMUST00000058667 2728 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
Lrit2Q6PFC5 Scn1b-201ENSMUST00000098548 1573 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
Lrit2Q6PFC5 Gm27040-201ENSMUST00000181984 504 ntTSL 2 BASIC21.11■□□□□ 0.97
Lrit2Q6PFC5 Tbc1d25-203ENSMUST00000143984 2184 ntAPPRIS ALT2 TSL 5 BASIC21.1■□□□□ 0.97
Lrit2Q6PFC5 Ildr2-206ENSMUST00000194964 2467 ntAPPRIS ALT2 TSL 1 (best) BASIC21.1■□□□□ 0.97
Lrit2Q6PFC5 Smurf1-203ENSMUST00000110677 5420 ntTSL 5 BASIC21.1■□□□□ 0.97
Lrit2Q6PFC5 Cyp2r1-202ENSMUST00000119712 917 ntTSL 5 BASIC21.1■□□□□ 0.97
Lrit2Q6PFC5 Galr3-201ENSMUST00000058004 1245 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
Lrit2Q6PFC5 Slc16a11-207ENSMUST00000136328 1403 ntTSL 5 BASIC21.1■□□□□ 0.97
Lrit2Q6PFC5 2510039O18Rik-201ENSMUST00000103232 2731 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
Lrit2Q6PFC5 Nudc-201ENSMUST00000030665 1316 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
Lrit2Q6PFC5 Siah1a-201ENSMUST00000045296 1968 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
Lrit2Q6PFC5 Spsb3-205ENSMUST00000120943 1949 ntAPPRIS ALT2 TSL 1 (best) BASIC21.09■□□□□ 0.97
Lrit2Q6PFC5 Ppa2-203ENSMUST00000122334 1368 ntAPPRIS ALT2 TSL 1 (best) BASIC21.09■□□□□ 0.97
Lrit2Q6PFC5 Srd5a3-201ENSMUST00000031143 1747 ntAPPRIS P2 TSL 1 (best) BASIC21.08■□□□□ 0.97
Lrit2Q6PFC5 Fam181b-201ENSMUST00000051179 2003 ntAPPRIS P1 BASIC21.08■□□□□ 0.97
Lrit2Q6PFC5 Tmem9b-201ENSMUST00000033333 1703 ntAPPRIS P2 TSL 1 (best) BASIC21.07■□□□□ 0.96
Lrit2Q6PFC5 Fam126a-206ENSMUST00000197617 2288 ntTSL 5 BASIC21.07■□□□□ 0.96
Lrit2Q6PFC5 Rab4a-202ENSMUST00000118535 1419 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
Lrit2Q6PFC5 Ildr2-202ENSMUST00000192426 1238 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
Lrit2Q6PFC5 Foxk2-201ENSMUST00000106113 5029 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
Retrieved 100 of 76,532 protein–RNA pairs in 21.4 ms