Protein–RNA interactions for Protein: Q61080

Foxf1, Forkhead box protein F1, mousemouse

Predictions only

Length 378 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Foxf1Q61080 Med25-205ENSMUST00000207278 2287 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
Foxf1Q61080 Btbd2-202ENSMUST00000126980 2449 ntAPPRIS ALT2 TSL 5 BASIC18.87■□□□□ 0.61
Foxf1Q61080 Hmgn3-202ENSMUST00000162246 983 ntAPPRIS P4 TSL 1 (best) BASIC18.87■□□□□ 0.61
Foxf1Q61080 Plpp2-204ENSMUST00000166804 1566 ntAPPRIS ALT2 TSL 1 (best) BASIC18.87■□□□□ 0.61
Foxf1Q61080 Nnat-208ENSMUST00000173595 927 ntTSL 2 BASIC18.87■□□□□ 0.61
Foxf1Q61080 Gm40983-202ENSMUST00000222598 1198 ntTSL 5 BASIC18.87■□□□□ 0.61
Foxf1Q61080 Sh3gl3-201ENSMUST00000032874 1647 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Foxf1Q61080 Prph-202ENSMUST00000047104 1865 ntAPPRIS P3 TSL 1 (best) BASIC18.87■□□□□ 0.61
Foxf1Q61080 A930035D04Rik-201ENSMUST00000064013 543 ntBASIC18.87■□□□□ 0.61
Foxf1Q61080 Hoxb9-201ENSMUST00000000010 2574 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Foxf1Q61080 Fam120a-201ENSMUST00000060805 5105 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Foxf1Q61080 Gm10499-202ENSMUST00000174778 1698 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
Foxf1Q61080 Krtap28-13-201ENSMUST00000188005 992 ntAPPRIS P1 BASIC18.86■□□□□ 0.61
Foxf1Q61080 Prr5-201ENSMUST00000065499 1830 ntAPPRIS P3 TSL 1 (best) BASIC18.86■□□□□ 0.61
Foxf1Q61080 Aebp2-203ENSMUST00000095350 2575 ntAPPRIS ALT2 TSL 1 (best) BASIC18.86■□□□□ 0.61
Foxf1Q61080 Krtap17-1-201ENSMUST00000105049 761 ntAPPRIS P1 BASIC18.85■□□□□ 0.61
Foxf1Q61080 Gm17110-201ENSMUST00000171248 735 ntTSL 3 BASIC18.85■□□□□ 0.61
Foxf1Q61080 Izumo4-205ENSMUST00000218184 1196 ntAPPRIS P1 TSL 2 BASIC18.85■□□□□ 0.61
Foxf1Q61080 Apcdd1-201ENSMUST00000096554 2799 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Foxf1Q61080 Azin2-202ENSMUST00000106068 2049 ntAPPRIS P1 TSL 5 BASIC18.84■□□□□ 0.61
Foxf1Q61080 Cnep1r1-201ENSMUST00000095214 1731 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
Foxf1Q61080 Ttc9-201ENSMUST00000036116 2042 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
Foxf1Q61080 Acvr2b-201ENSMUST00000035093 1729 ntTSL 5 BASIC18.83■□□□□ 0.6
Foxf1Q61080 Ppp4c-201ENSMUST00000032936 1359 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Foxf1Q61080 Tsen34-201ENSMUST00000038521 1365 ntAPPRIS P1 TSL 5 BASIC18.82■□□□□ 0.6
Foxf1Q61080 Trappc6b-203ENSMUST00000217863 797 ntTSL 2 BASIC18.82■□□□□ 0.6
Foxf1Q61080 AC154454.1-201ENSMUST00000225253 216 ntBASIC18.82■□□□□ 0.6
Foxf1Q61080 Insm2-201ENSMUST00000051857 2660 ntAPPRIS P1 BASIC18.82■□□□□ 0.6
Foxf1Q61080 Dbndd2-202ENSMUST00000069385 1658 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Foxf1Q61080 P4ha3-201ENSMUST00000057023 2361 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Foxf1Q61080 Bag2-201ENSMUST00000044691 1860 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Foxf1Q61080 Carm1-201ENSMUST00000034703 3220 ntAPPRIS P3 TSL 1 (best) BASIC18.81■□□□□ 0.6
Foxf1Q61080 Mir3960-201ENSMUST00000198213 73 ntBASIC18.81■□□□□ 0.6
Foxf1Q61080 Rp9-201ENSMUST00000034763 1134 ntAPPRIS P2 TSL 1 (best) BASIC18.81■□□□□ 0.6
Foxf1Q61080 Kdf1-202ENSMUST00000105901 1699 ntAPPRIS P2 TSL 1 (best) BASIC18.81■□□□□ 0.6
Foxf1Q61080 Mxra7-201ENSMUST00000021170 2063 ntAPPRIS P3 TSL 1 (best) BASIC18.81■□□□□ 0.6
Foxf1Q61080 Dlx2-201ENSMUST00000024159 2473 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Foxf1Q61080 Homer3-203ENSMUST00000110124 2445 ntAPPRIS ALT1 TSL 5 BASIC18.8■□□□□ 0.6
Foxf1Q61080 Pard6a-201ENSMUST00000093195 1265 ntAPPRIS P3 TSL 1 (best) BASIC18.8■□□□□ 0.6
Foxf1Q61080 Gng12-204ENSMUST00000114225 1876 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Foxf1Q61080 Jmjd6-201ENSMUST00000047616 1668 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Foxf1Q61080 Hgh1-201ENSMUST00000023213 1959 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Foxf1Q61080 Fam126a-206ENSMUST00000197617 2288 ntTSL 5 BASIC18.79■□□□□ 0.6
Foxf1Q61080 Actr5-201ENSMUST00000045644 2402 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Foxf1Q61080 Purg-202ENSMUST00000078058 1795 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
Foxf1Q61080 Slc16a11-205ENSMUST00000126388 1938 ntAPPRIS P1 TSL 5 BASIC18.79■□□□□ 0.6
Foxf1Q61080 AC167019.3-201ENSMUST00000228225 1266 ntBASIC18.79■□□□□ 0.6
Foxf1Q61080 Mrps15-201ENSMUST00000030675 937 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Foxf1Q61080 Spsb3-202ENSMUST00000068508 2004 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
Foxf1Q61080 Nrarp-201ENSMUST00000104999 2582 ntAPPRIS P1 BASIC18.79■□□□□ 0.6
Foxf1Q61080 Ccnl2-201ENSMUST00000030944 2442 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Foxf1Q61080 Gm2018-201ENSMUST00000140754 478 ntTSL 2 BASIC18.78■□□□□ 0.6
Foxf1Q61080 Gm9812-201ENSMUST00000061934 968 ntBASIC18.78■□□□□ 0.6
Foxf1Q61080 Ybx3-202ENSMUST00000087865 1684 ntAPPRIS ALT2 TSL 1 (best) BASIC18.78■□□□□ 0.6
Foxf1Q61080 Gm26533-201ENSMUST00000180550 1790 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
Foxf1Q61080 Fbxl14-201ENSMUST00000032094 2963 ntAPPRIS P1 BASIC18.78■□□□□ 0.6
Foxf1Q61080 Fance-203ENSMUST00000114803 1980 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
Foxf1Q61080 Grb2-201ENSMUST00000021090 2709 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.59
Foxf1Q61080 2310061I04Rik-202ENSMUST00000146451 2081 ntTSL 1 (best) BASIC18.77■□□□□ 0.59
Foxf1Q61080 Larp4b-204ENSMUST00000188939 2658 ntTSL 1 (best) BASIC18.77■□□□□ 0.59
Foxf1Q61080 Gm12818-201ENSMUST00000117562 1349 ntBASIC18.76■□□□□ 0.59
Foxf1Q61080 Zfp91-201ENSMUST00000038627 5531 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Foxf1Q61080 Nrsn1-201ENSMUST00000057866 2222 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Foxf1Q61080 Zcrb1-201ENSMUST00000076070 877 ntAPPRIS P3 TSL 1 (best) BASIC18.76■□□□□ 0.59
Foxf1Q61080 Hand2-201ENSMUST00000040104 2351 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Foxf1Q61080 Ube2g2-204ENSMUST00000174510 2031 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Foxf1Q61080 Rasgef1c-203ENSMUST00000093142 2216 ntAPPRIS P3 TSL 1 (best) BASIC18.76■□□□□ 0.59
Foxf1Q61080 Tbr1-202ENSMUST00000102737 1406 ntTSL 2 BASIC18.75■□□□□ 0.59
Foxf1Q61080 Gm6277-202ENSMUST00000224036 2779 ntBASIC18.75■□□□□ 0.59
Foxf1Q61080 Mppe1-201ENSMUST00000073054 2007 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Foxf1Q61080 Spire2-201ENSMUST00000010298 2330 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Foxf1Q61080 Dnajc21-201ENSMUST00000136591 2060 ntAPPRIS P1 TSL 5 BASIC18.75■□□□□ 0.59
Foxf1Q61080 Lrrc14-201ENSMUST00000036423 2093 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Foxf1Q61080 Barhl1-202ENSMUST00000113847 2160 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Foxf1Q61080 Arrdc2-201ENSMUST00000002989 2355 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Foxf1Q61080 Npas1-201ENSMUST00000002053 2091 ntAPPRIS P1 TSL 5 BASIC18.73■□□□□ 0.59
Foxf1Q61080 Ing2-201ENSMUST00000080353 2812 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Foxf1Q61080 Slc44a1-203ENSMUST00000107646 1974 ntTSL 5 BASIC18.73■□□□□ 0.59
Foxf1Q61080 Ankrd28-201ENSMUST00000014640 6712 ntAPPRIS P2 TSL 1 (best) BASIC18.73■□□□□ 0.59
Foxf1Q61080 Nog-201ENSMUST00000061728 1695 ntAPPRIS P1 BASIC18.73■□□□□ 0.59
Foxf1Q61080 Frmd5-201ENSMUST00000110592 2222 ntAPPRIS P1 TSL 5 BASIC18.73■□□□□ 0.59
Foxf1Q61080 Kctd2-201ENSMUST00000103035 1764 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Foxf1Q61080 Homer1-207ENSMUST00000109494 2468 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
Foxf1Q61080 B3gat1-203ENSMUST00000159799 2021 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
Foxf1Q61080 Gnaq-201ENSMUST00000025541 5644 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Foxf1Q61080 Ccdc142-201ENSMUST00000101254 2317 ntAPPRIS P1 TSL 5 BASIC18.72■□□□□ 0.59
Foxf1Q61080 March2-206ENSMUST00000173329 2566 ntTSL 2 BASIC18.72■□□□□ 0.59
Foxf1Q61080 Chtf8-205ENSMUST00000176515 694 ntTSL 2 BASIC18.72■□□□□ 0.59
Foxf1Q61080 Gm45364-201ENSMUST00000210883 159 ntBASIC18.72■□□□□ 0.59
Foxf1Q61080 AC122317.2-201ENSMUST00000218708 1248 ntBASIC18.72■□□□□ 0.59
Foxf1Q61080 Mlycd-201ENSMUST00000098367 2128 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Foxf1Q61080 Kctd6-201ENSMUST00000022272 1650 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Foxf1Q61080 Sec63-201ENSMUST00000019937 6032 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Foxf1Q61080 Vmac-201ENSMUST00000067931 2174 ntAPPRIS P3 TSL 1 (best) BASIC18.71■□□□□ 0.59
Foxf1Q61080 AC153911.1-201ENSMUST00000220378 758 ntBASIC18.71■□□□□ 0.59
Foxf1Q61080 Kctd5-201ENSMUST00000017090 2443 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Foxf1Q61080 Tmbim4-204ENSMUST00000134797 486 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
Foxf1Q61080 Rnf39-201ENSMUST00000040498 1579 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Foxf1Q61080 Mthfd2l-201ENSMUST00000071652 2159 ntAPPRIS P1 TSL 5 BASIC18.7■□□□□ 0.58
Foxf1Q61080 Srarp-201ENSMUST00000094544 905 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Retrieved 100 of 76,532 protein–RNA pairs in 21.3 ms