Protein–RNA interactions for Protein: Q3U435

Mmp25, Matrix metalloproteinase-25, mousemouse

Predictions only

Length 615 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Mmp25Q3U435 Scn1b-201ENSMUST00000098548 1573 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
Mmp25Q3U435 Pdlim4-201ENSMUST00000018755 1182 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
Mmp25Q3U435 Rnaseh2c-201ENSMUST00000025864 1126 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
Mmp25Q3U435 Srsf2-206ENSMUST00000190993 1326 ntAPPRIS P1 TSL 2 BASIC21.24■□□□□ 0.99
Mmp25Q3U435 A330041J22Rik-201ENSMUST00000150367 1825 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
Mmp25Q3U435 Gm13256-201ENSMUST00000131297 520 ntTSL 3 BASIC21.23■□□□□ 0.99
Mmp25Q3U435 Pura-201ENSMUST00000051301 3145 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
Mmp25Q3U435 B230377A18Rik-202ENSMUST00000192921 1364 ntBASIC21.23■□□□□ 0.99
Mmp25Q3U435 Slc16a11-207ENSMUST00000136328 1403 ntTSL 5 BASIC21.22■□□□□ 0.99
Mmp25Q3U435 Vegfb-202ENSMUST00000130048 1158 ntAPPRIS ALT2 TSL 1 (best) BASIC21.22■□□□□ 0.99
Mmp25Q3U435 Gm44428-201ENSMUST00000204474 874 ntBASIC21.22■□□□□ 0.99
Mmp25Q3U435 Foxa2-202ENSMUST00000109964 2070 ntAPPRIS ALT2 TSL 1 (best) BASIC21.22■□□□□ 0.99
Mmp25Q3U435 Tmem106c-201ENSMUST00000064200 1635 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
Mmp25Q3U435 Fra10ac1-201ENSMUST00000067167 1402 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
Mmp25Q3U435 Smox-201ENSMUST00000028806 2270 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
Mmp25Q3U435 Tmem11-201ENSMUST00000062677 1457 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
Mmp25Q3U435 Usf1-210ENSMUST00000167546 1822 ntAPPRIS P1 TSL 5 BASIC21.21■□□□□ 0.99
Mmp25Q3U435 Hoxc8-201ENSMUST00000001703 1868 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
Mmp25Q3U435 Wnt5b-203ENSMUST00000119369 2339 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
Mmp25Q3U435 Gm42699-201ENSMUST00000198104 1657 ntBASIC21.19■□□□□ 0.98
Mmp25Q3U435 Prr5-202ENSMUST00000171460 1719 ntAPPRIS ALT2 TSL 1 (best) BASIC21.19■□□□□ 0.98
Mmp25Q3U435 Mpped1-208ENSMUST00000163723 1064 ntTSL 5 BASIC21.19■□□□□ 0.98
Mmp25Q3U435 Slc35a2-211ENSMUST00000208640 486 ntTSL 5 BASIC21.19■□□□□ 0.98
Mmp25Q3U435 Kiss1-202ENSMUST00000178033 496 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
Mmp25Q3U435 Hscb-201ENSMUST00000056937 804 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
Mmp25Q3U435 P3h4-201ENSMUST00000066489 2178 ntAPPRIS P2 TSL 1 (best) BASIC21.18■□□□□ 0.98
Mmp25Q3U435 Srd5a3-201ENSMUST00000031143 1747 ntAPPRIS P2 TSL 1 (best) BASIC21.18■□□□□ 0.98
Mmp25Q3U435 Siah1a-201ENSMUST00000045296 1968 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
Mmp25Q3U435 Gas2l1-201ENSMUST00000037146 2686 ntAPPRIS ALT2 TSL 1 (best) BASIC21.17■□□□□ 0.98
Mmp25Q3U435 Ybx2-205ENSMUST00000149194 1235 ntTSL 5 BASIC21.17■□□□□ 0.98
Mmp25Q3U435 Gm20458-201ENSMUST00000164863 1369 ntAPPRIS P1 TSL 5 BASIC21.17■□□□□ 0.98
Mmp25Q3U435 Coro1b-201ENSMUST00000008893 1888 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
Mmp25Q3U435 Ddx43-201ENSMUST00000113367 2207 ntAPPRIS P1 TSL 5 BASIC21.17■□□□□ 0.98
Mmp25Q3U435 Artn-201ENSMUST00000070816 2177 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
Mmp25Q3U435 Slc16a11-211ENSMUST00000171032 1754 ntAPPRIS P1 TSL 5 BASIC21.16■□□□□ 0.98
Mmp25Q3U435 Gimap1-205ENSMUST00000204168 1469 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
Mmp25Q3U435 Eif4e2-204ENSMUST00000113231 1119 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
Mmp25Q3U435 Zfp703-201ENSMUST00000127097 587 ntTSL 2 BASIC21.16■□□□□ 0.98
Mmp25Q3U435 AC158592.1-201ENSMUST00000215560 1113 ntTSL 5 BASIC21.16■□□□□ 0.98
Mmp25Q3U435 Gm11613-201ENSMUST00000134427 1971 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
Mmp25Q3U435 Tsc22d1-204ENSMUST00000110888 4999 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
Mmp25Q3U435 Gli3-204ENSMUST00000141194 466 ntTSL 2 BASIC21.15■□□□□ 0.98
Mmp25Q3U435 Gm27502-201ENSMUST00000183495 199 ntBASIC21.15■□□□□ 0.98
Mmp25Q3U435 AC151971.4-201ENSMUST00000214717 704 ntBASIC21.15■□□□□ 0.98
Mmp25Q3U435 Maf-201ENSMUST00000069009 3223 ntAPPRIS ALT2 TSL 1 (best) BASIC21.15■□□□□ 0.98
Mmp25Q3U435 Nckap5los-201ENSMUST00000159738 1712 ntTSL 2 BASIC21.15■□□□□ 0.98
Mmp25Q3U435 AC164433.2-201ENSMUST00000226346 1701 ntBASIC21.15■□□□□ 0.98
Mmp25Q3U435 Tmem158-201ENSMUST00000068140 1712 ntAPPRIS P1 BASIC21.15■□□□□ 0.98
Mmp25Q3U435 Ran-202ENSMUST00000111343 2423 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
Mmp25Q3U435 Gm44957-202ENSMUST00000205137 448 ntTSL 3 BASIC21.14■□□□□ 0.97
Mmp25Q3U435 Rps2-ps13-201ENSMUST00000117295 882 ntBASIC21.13■□□□□ 0.97
Mmp25Q3U435 Gm12366-201ENSMUST00000121722 873 ntBASIC21.13■□□□□ 0.97
Mmp25Q3U435 Rps2-206ENSMUST00000146867 962 ntTSL 5 BASIC21.13■□□□□ 0.97
Mmp25Q3U435 Cutc-201ENSMUST00000026199 1298 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
Mmp25Q3U435 Rps2-ps10-201ENSMUST00000076842 879 ntBASIC21.13■□□□□ 0.97
Mmp25Q3U435 Gm5786-201ENSMUST00000085368 882 ntBASIC21.13■□□□□ 0.97
Mmp25Q3U435 Dusp22-201ENSMUST00000091672 1161 ntAPPRIS ALT2 TSL 1 (best) BASIC21.13■□□□□ 0.97
Mmp25Q3U435 Gorasp2-205ENSMUST00000133432 1941 ntAPPRIS ALT2 TSL 1 (best) BASIC21.13■□□□□ 0.97
Mmp25Q3U435 Fam220a-206ENSMUST00000196487 2278 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
Mmp25Q3U435 Tmem235-201ENSMUST00000093905 1820 ntAPPRIS P1 TSL 5 BASIC21.13■□□□□ 0.97
Mmp25Q3U435 Plpp5-201ENSMUST00000068916 1483 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
Mmp25Q3U435 Gng3-201ENSMUST00000096259 1699 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
Mmp25Q3U435 Stambp-207ENSMUST00000206592 2152 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
Mmp25Q3U435 Eya2-202ENSMUST00000088132 2447 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
Mmp25Q3U435 Nudt3-203ENSMUST00000114886 996 ntTSL 2 BASIC21.12■□□□□ 0.97
Mmp25Q3U435 AC153366.1-201ENSMUST00000218132 1056 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
Mmp25Q3U435 A830010M20Rik-202ENSMUST00000094541 1134 ntTSL 5 BASIC21.12■□□□□ 0.97
Mmp25Q3U435 Dennd5a-202ENSMUST00000106722 4862 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
Mmp25Q3U435 Gm8098-201ENSMUST00000146985 1499 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
Mmp25Q3U435 Jag2-201ENSMUST00000075827 5106 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
Mmp25Q3U435 Porcn-201ENSMUST00000077595 1872 ntAPPRIS P4 TSL 1 (best) BASIC21.11■□□□□ 0.97
Mmp25Q3U435 Porcn-204ENSMUST00000089403 1854 ntAPPRIS ALT1 TSL 1 (best) BASIC21.11■□□□□ 0.97
Mmp25Q3U435 Mlycd-201ENSMUST00000098367 2128 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
Mmp25Q3U435 Slc30a3-201ENSMUST00000031037 2089 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
Mmp25Q3U435 Dapk2-201ENSMUST00000034944 1772 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
Mmp25Q3U435 Mtm1-204ENSMUST00000101501 770 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
Mmp25Q3U435 1700020L24Rik-201ENSMUST00000037378 949 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
Mmp25Q3U435 St7-207ENSMUST00000115418 1678 ntTSL 5 BASIC21.11■□□□□ 0.97
Mmp25Q3U435 Gm11542-201ENSMUST00000126480 1511 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
Mmp25Q3U435 Tmem150a-202ENSMUST00000132243 1478 ntTSL 5 BASIC21.1■□□□□ 0.97
Mmp25Q3U435 Gm14523-201ENSMUST00000117260 558 ntBASIC21.1■□□□□ 0.97
Mmp25Q3U435 Cyp2r1-202ENSMUST00000119712 917 ntTSL 5 BASIC21.1■□□□□ 0.97
Mmp25Q3U435 Gm13594-201ENSMUST00000137582 476 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
Mmp25Q3U435 Siva1-201ENSMUST00000021728 924 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
Mmp25Q3U435 Smagp-201ENSMUST00000066068 1132 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
Mmp25Q3U435 Gm26711-201ENSMUST00000180866 1833 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
Mmp25Q3U435 Cap2-205ENSMUST00000225824 1634 ntBASIC21.1■□□□□ 0.97
Mmp25Q3U435 Tmem221-201ENSMUST00000052072 1604 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
Mmp25Q3U435 Arhgap9-201ENSMUST00000069548 1782 ntAPPRIS P2 TSL 1 (best) BASIC21.1■□□□□ 0.97
Mmp25Q3U435 Dbp-201ENSMUST00000080885 1837 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
Mmp25Q3U435 Klhl15-202ENSMUST00000113908 1235 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
Mmp25Q3U435 E130309D02Rik-201ENSMUST00000046418 2208 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
Mmp25Q3U435 Ube2g2-204ENSMUST00000174510 2031 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
Mmp25Q3U435 B4galt2-201ENSMUST00000030266 2312 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
Mmp25Q3U435 Snta1-202ENSMUST00000109728 2131 ntAPPRIS P2 TSL 1 (best) BASIC21.08■□□□□ 0.97
Mmp25Q3U435 6430628N08Rik-202ENSMUST00000165938 1602 ntTSL 5 BASIC21.08■□□□□ 0.97
Mmp25Q3U435 Gm45051-201ENSMUST00000206838 963 ntTSL 1 (best) BASIC21.08■□□□□ 0.97
Mmp25Q3U435 Kiss1-201ENSMUST00000007433 779 ntAPPRIS P1 TSL 2 BASIC21.08■□□□□ 0.97
Mmp25Q3U435 Runx2-211ENSMUST00000162629 1607 ntAPPRIS ALT2 TSL 5 BASIC21.07■□□□□ 0.96
Mmp25Q3U435 Gm45713-201ENSMUST00000209467 1477 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
Retrieved 100 of 76,532 protein–RNA pairs in 102.8 ms