Protein–RNA interactions for Protein: P82349

Sgcb, Beta-sarcoglycan, mousemouse

Predictions only

Length 320 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SgcbP82349 Ube2k-203ENSMUST00000201266 1449 ntTSL 5 BASIC20.03■□□□□ 0.8
SgcbP82349 Arpc2-201ENSMUST00000006467 1404 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
SgcbP82349 Eva1b-202ENSMUST00000106150 1144 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
SgcbP82349 Hdac2-201ENSMUST00000019911 2005 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
SgcbP82349 Grin2d-203ENSMUST00000211713 5244 ntAPPRIS P1 TSL 5 BASIC20.02■□□□□ 0.8
SgcbP82349 Rbm45-201ENSMUST00000046389 1898 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
SgcbP82349 Slc44a1-203ENSMUST00000107646 1974 ntTSL 5 BASIC20.02■□□□□ 0.8
SgcbP82349 Efcc1-202ENSMUST00000159570 2293 ntAPPRIS P2 TSL 5 BASIC20.02■□□□□ 0.8
SgcbP82349 Fam168b-203ENSMUST00000167518 5058 ntTSL 5 BASIC20.02■□□□□ 0.8
SgcbP82349 Pdpk1-203ENSMUST00000115407 1730 ntTSL 5 BASIC20.02■□□□□ 0.79
SgcbP82349 Adgrb1-201ENSMUST00000042035 6228 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
SgcbP82349 Tspan33-202ENSMUST00000115250 1977 ntAPPRIS ALT1 TSL 1 (best) BASIC20.01■□□□□ 0.79
SgcbP82349 Gm16049-201ENSMUST00000155166 616 ntTSL 3 BASIC20.01■□□□□ 0.79
SgcbP82349 Snta1-201ENSMUST00000028991 2125 ntAPPRIS ALT2 TSL 1 (best) BASIC20.01■□□□□ 0.79
SgcbP82349 Kcnk2-205ENSMUST00000192723 1642 ntAPPRIS ALT1 TSL 1 (best) BASIC20.01■□□□□ 0.79
SgcbP82349 Vmac-201ENSMUST00000067931 2174 ntAPPRIS P3 TSL 1 (best) BASIC20.01■□□□□ 0.79
SgcbP82349 Gm20208-202ENSMUST00000219905 1528 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
SgcbP82349 Prph-202ENSMUST00000047104 1865 ntAPPRIS P3 TSL 1 (best) BASIC20.01■□□□□ 0.79
SgcbP82349 Adgrb1-203ENSMUST00000185682 2744 ntTSL 1 (best) BASIC20■□□□□ 0.79
SgcbP82349 Nhlrc1-201ENSMUST00000052747 2294 ntAPPRIS P1 BASIC20■□□□□ 0.79
SgcbP82349 AC158592.1-201ENSMUST00000215560 1113 ntTSL 5 BASIC20■□□□□ 0.79
SgcbP82349 Gm21989-201ENSMUST00000174530 1609 ntTSL 1 (best) BASIC20■□□□□ 0.79
SgcbP82349 Otud5-205ENSMUST00000115668 2543 ntTSL 1 (best) BASIC20■□□□□ 0.79
SgcbP82349 Inafm1-201ENSMUST00000169612 1605 ntAPPRIS P1 BASIC19.99■□□□□ 0.79
SgcbP82349 Ybx2-205ENSMUST00000149194 1235 ntTSL 5 BASIC19.99■□□□□ 0.79
SgcbP82349 Mpped1-208ENSMUST00000163723 1064 ntTSL 5 BASIC19.99■□□□□ 0.79
SgcbP82349 Nsmce4a-202ENSMUST00000160289 1435 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
SgcbP82349 St6galnac6-204ENSMUST00000095045 2536 ntAPPRIS ALT1 TSL 1 (best) BASIC19.99■□□□□ 0.79
SgcbP82349 Qdpr-201ENSMUST00000015950 1380 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
SgcbP82349 Asf1a-201ENSMUST00000020004 2201 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
SgcbP82349 Ppp1ca-201ENSMUST00000046094 1379 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
SgcbP82349 Lgi2-202ENSMUST00000199942 6273 ntAPPRIS ALT2 TSL 1 (best) BASIC19.97■□□□□ 0.79
SgcbP82349 Wbp1-208ENSMUST00000151393 837 ntTSL 3 BASIC19.97■□□□□ 0.79
SgcbP82349 Kcnj6-201ENSMUST00000095873 1773 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
SgcbP82349 Ethe1-201ENSMUST00000077191 1484 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
SgcbP82349 Mxra7-201ENSMUST00000021170 2063 ntAPPRIS P3 TSL 1 (best) BASIC19.96■□□□□ 0.79
SgcbP82349 Stat5b-201ENSMUST00000004143 5062 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
SgcbP82349 Zdhhc2-205ENSMUST00000167766 1759 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
SgcbP82349 Nisch-201ENSMUST00000022469 5559 ntAPPRIS P3 TSL 2 BASIC19.96■□□□□ 0.79
SgcbP82349 2510039O18Rik-201ENSMUST00000103232 2731 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
SgcbP82349 Rasgef1c-203ENSMUST00000093142 2216 ntAPPRIS P3 TSL 1 (best) BASIC19.95■□□□□ 0.78
SgcbP82349 Ttc9-201ENSMUST00000036116 2042 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
SgcbP82349 Psmb8-201ENSMUST00000025196 1628 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
SgcbP82349 Epop-201ENSMUST00000052281 2314 ntAPPRIS P1 BASIC19.95■□□□□ 0.78
SgcbP82349 Gm13256-201ENSMUST00000131297 520 ntTSL 3 BASIC19.95■□□□□ 0.78
SgcbP82349 Pdlim4-201ENSMUST00000018755 1182 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
SgcbP82349 Ildr2-206ENSMUST00000194964 2467 ntAPPRIS ALT2 TSL 1 (best) BASIC19.95■□□□□ 0.78
SgcbP82349 Pou6f1-202ENSMUST00000073837 4953 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
SgcbP82349 Hist2h3c1-201ENSMUST00000176059 1820 ntAPPRIS P1 BASIC19.95■□□□□ 0.78
SgcbP82349 Hist2h3c1-202ENSMUST00000177796 1825 ntBASIC19.95■□□□□ 0.78
SgcbP82349 Ryk-201ENSMUST00000035142 2852 ntAPPRIS ALT2 TSL 1 (best) BASIC19.94■□□□□ 0.78
SgcbP82349 Klhl15-203ENSMUST00000113911 1227 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
SgcbP82349 Gli3-204ENSMUST00000141194 466 ntTSL 2 BASIC19.94■□□□□ 0.78
SgcbP82349 Gm44957-202ENSMUST00000205137 448 ntTSL 3 BASIC19.94■□□□□ 0.78
SgcbP82349 Slc35a2-211ENSMUST00000208640 486 ntTSL 5 BASIC19.94■□□□□ 0.78
SgcbP82349 Gm39157-201ENSMUST00000212322 1180 ntTSL 5 BASIC19.94■□□□□ 0.78
SgcbP82349 Fam220a-201ENSMUST00000067145 2198 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
SgcbP82349 AC153890.1-201ENSMUST00000220021 2469 ntBASIC19.94■□□□□ 0.78
SgcbP82349 Oaz2-206ENSMUST00000153700 1843 ntAPPRIS P2 TSL 5 BASIC19.93■□□□□ 0.78
SgcbP82349 Onecut3-201ENSMUST00000051773 4776 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
SgcbP82349 Mtm1-204ENSMUST00000101501 770 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
SgcbP82349 Eif4e2-204ENSMUST00000113231 1119 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
SgcbP82349 Vegfb-202ENSMUST00000130048 1158 ntAPPRIS ALT2 TSL 1 (best) BASIC19.93■□□□□ 0.78
SgcbP82349 Kiss1-202ENSMUST00000178033 496 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
SgcbP82349 Cox11-201ENSMUST00000020851 1224 ntAPPRIS P2 TSL 1 (best) BASIC19.93■□□□□ 0.78
SgcbP82349 Hscb-201ENSMUST00000056937 804 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
SgcbP82349 Gabbr2-201ENSMUST00000107749 5750 ntAPPRIS P1 TSL 2 BASIC19.93■□□□□ 0.78
SgcbP82349 Ei24-201ENSMUST00000115086 2220 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
SgcbP82349 Gm27502-201ENSMUST00000183495 199 ntBASIC19.92■□□□□ 0.78
SgcbP82349 Gpr27-201ENSMUST00000101122 2388 ntAPPRIS P1 BASIC19.92■□□□□ 0.78
SgcbP82349 Fra10ac1-201ENSMUST00000067167 1402 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
SgcbP82349 Gm8098-201ENSMUST00000146985 1499 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
SgcbP82349 Rnf39-201ENSMUST00000040498 1579 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
SgcbP82349 Fam102b-202ENSMUST00000171143 5702 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
SgcbP82349 Spsb3-205ENSMUST00000120943 1949 ntAPPRIS ALT2 TSL 1 (best) BASIC19.9■□□□□ 0.78
SgcbP82349 Fam181b-201ENSMUST00000051179 2003 ntAPPRIS P1 BASIC19.9■□□□□ 0.78
SgcbP82349 Tbc1d25-203ENSMUST00000143984 2184 ntAPPRIS ALT2 TSL 5 BASIC19.9■□□□□ 0.78
SgcbP82349 Gm44428-201ENSMUST00000204474 874 ntBASIC19.9■□□□□ 0.78
SgcbP82349 Cadm1-206ENSMUST00000143026 1643 ntTSL 5 BASIC19.9■□□□□ 0.78
SgcbP82349 Cap2-205ENSMUST00000225824 1634 ntBASIC19.9■□□□□ 0.78
SgcbP82349 Gm43573-201ENSMUST00000196445 570 ntTSL 5 BASIC19.89■□□□□ 0.77
SgcbP82349 1700020L24Rik-201ENSMUST00000037378 949 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
SgcbP82349 Tmem11-201ENSMUST00000062677 1457 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
SgcbP82349 Gm20458-201ENSMUST00000164863 1369 ntAPPRIS P1 TSL 5 BASIC19.88■□□□□ 0.77
SgcbP82349 B230377A18Rik-202ENSMUST00000192921 1364 ntBASIC19.88■□□□□ 0.77
SgcbP82349 Srsf2-206ENSMUST00000190993 1326 ntAPPRIS P1 TSL 2 BASIC19.88■□□□□ 0.77
SgcbP82349 Zfp703-201ENSMUST00000127097 587 ntTSL 2 BASIC19.88■□□□□ 0.77
SgcbP82349 Siva1-201ENSMUST00000021728 924 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
SgcbP82349 Usf1-210ENSMUST00000167546 1822 ntAPPRIS P1 TSL 5 BASIC19.88■□□□□ 0.77
SgcbP82349 Fam126a-206ENSMUST00000197617 2288 ntTSL 5 BASIC19.87■□□□□ 0.77
SgcbP82349 Dnajc21-201ENSMUST00000136591 2060 ntAPPRIS P1 TSL 5 BASIC19.87■□□□□ 0.77
SgcbP82349 Rps2-ps13-201ENSMUST00000117295 882 ntBASIC19.87■□□□□ 0.77
SgcbP82349 Gm12366-201ENSMUST00000121722 873 ntBASIC19.87■□□□□ 0.77
SgcbP82349 Rps2-206ENSMUST00000146867 962 ntTSL 5 BASIC19.87■□□□□ 0.77
SgcbP82349 Rps2-ps10-201ENSMUST00000076842 879 ntBASIC19.87■□□□□ 0.77
SgcbP82349 Gm5786-201ENSMUST00000085368 882 ntBASIC19.87■□□□□ 0.77
SgcbP82349 Rnaset2a-201ENSMUST00000097420 1259 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
SgcbP82349 Tead1-203ENSMUST00000084705 2543 ntAPPRIS ALT1 TSL 1 (best) BASIC19.87■□□□□ 0.77
SgcbP82349 Rnf19b-201ENSMUST00000030584 2414 ntAPPRIS ALT2 TSL 5 BASIC19.87■□□□□ 0.77
SgcbP82349 Cutc-201ENSMUST00000026199 1298 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
Retrieved 100 of 76,532 protein–RNA pairs in 92.7 ms