Protein–RNA interactions for Protein: P62984

Uba52, Ubiquitin-60S ribosomal protein L40, mousemouse

Predictions only

Length 128 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Uba52P62984 Ccnl2-201ENSMUST00000030944 2442 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
Uba52P62984 Spsb3-205ENSMUST00000120943 1949 ntAPPRIS ALT2 TSL 1 (best) BASIC19.33■□□□□ 0.68
Uba52P62984 Lmtk3-202ENSMUST00000120005 4997 ntAPPRIS P2 TSL 1 (best) BASIC19.33■□□□□ 0.68
Uba52P62984 Gm6277-202ENSMUST00000224036 2779 ntBASIC19.32■□□□□ 0.68
Uba52P62984 Prr5-201ENSMUST00000065499 1830 ntAPPRIS P3 TSL 1 (best) BASIC19.32■□□□□ 0.68
Uba52P62984 Ppp4r2-201ENSMUST00000063854 4874 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Uba52P62984 Fance-203ENSMUST00000114803 1980 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
Uba52P62984 Gm13042-201ENSMUST00000119244 1955 ntBASIC19.32■□□□□ 0.68
Uba52P62984 Trappc6b-203ENSMUST00000217863 797 ntTSL 2 BASIC19.32■□□□□ 0.68
Uba52P62984 Otulin-201ENSMUST00000059662 1491 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Uba52P62984 Csrp1-201ENSMUST00000027677 1823 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Uba52P62984 Csrp1-202ENSMUST00000097561 1828 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Uba52P62984 Phactr2-202ENSMUST00000105543 2735 ntAPPRIS P2 TSL 1 (best) BASIC19.31■□□□□ 0.68
Uba52P62984 Mir6538-201ENSMUST00000183713 110 ntBASIC19.31■□□□□ 0.68
Uba52P62984 Mtor-201ENSMUST00000057580 1003 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
Uba52P62984 Spire2-201ENSMUST00000010298 2330 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Uba52P62984 Cacna2d2-205ENSMUST00000168532 5807 ntAPPRIS ALT2 TSL 1 (best) BASIC19.31■□□□□ 0.68
Uba52P62984 Nrarp-201ENSMUST00000104999 2582 ntAPPRIS P1 BASIC19.31■□□□□ 0.68
Uba52P62984 Cadm1-209ENSMUST00000152459 1784 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
Uba52P62984 Chtf8-205ENSMUST00000176515 694 ntTSL 2 BASIC19.3■□□□□ 0.68
Uba52P62984 Krtap28-13-201ENSMUST00000188005 992 ntAPPRIS P1 BASIC19.3■□□□□ 0.68
Uba52P62984 Spsb3-202ENSMUST00000068508 2004 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
Uba52P62984 Zcchc2-202ENSMUST00000119166 6368 ntAPPRIS ALT2 TSL 1 (best) BASIC19.3■□□□□ 0.68
Uba52P62984 Agap2-202ENSMUST00000217941 5573 ntAPPRIS ALT2 TSL 1 (best) BASIC19.3■□□□□ 0.68
Uba52P62984 Sntb1-202ENSMUST00000110200 1225 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
Uba52P62984 Hoxb9-201ENSMUST00000000010 2574 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Uba52P62984 C130046K22Rik-201ENSMUST00000129780 727 ntTSL 5 BASIC19.28■□□□□ 0.68
Uba52P62984 Smagp-202ENSMUST00000172334 952 ntAPPRIS P1 TSL 2 BASIC19.28■□□□□ 0.68
Uba52P62984 Zdhhc2-205ENSMUST00000167766 1759 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Uba52P62984 Syndig1l-204ENSMUST00000222422 1758 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Uba52P62984 Mlycd-201ENSMUST00000098367 2128 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Uba52P62984 Etv4-212ENSMUST00000164750 2336 ntAPPRIS P3 TSL 1 (best) BASIC19.28■□□□□ 0.68
Uba52P62984 Pm20d2-202ENSMUST00000119167 1339 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
Uba52P62984 E130304I02Rik-202ENSMUST00000187873 696 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
Uba52P62984 Hand2-201ENSMUST00000040104 2351 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.67
Uba52P62984 Grap-201ENSMUST00000004959 1662 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.67
Uba52P62984 Pdss1-201ENSMUST00000053729 1642 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Uba52P62984 Insm2-201ENSMUST00000051857 2660 ntAPPRIS P1 BASIC19.26■□□□□ 0.67
Uba52P62984 B3gat1-203ENSMUST00000159799 2021 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
Uba52P62984 Gm11492-201ENSMUST00000060360 1972 ntAPPRIS P1 TSL 5 BASIC19.26■□□□□ 0.67
Uba52P62984 Homer1-207ENSMUST00000109494 2468 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
Uba52P62984 Kif1bp-201ENSMUST00000065887 2472 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Uba52P62984 Emc10-202ENSMUST00000118808 1872 ntAPPRIS P2 TSL 1 (best) BASIC19.25■□□□□ 0.67
Uba52P62984 Ybx3-201ENSMUST00000032309 1853 ntAPPRIS P4 TSL 1 (best) BASIC19.25■□□□□ 0.67
Uba52P62984 Yars2-201ENSMUST00000059955 1574 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Uba52P62984 Gm11175-201ENSMUST00000116172 543 ntBASIC19.25■□□□□ 0.67
Uba52P62984 Cadm1-210ENSMUST00000214542 899 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
Uba52P62984 H3f3aos-201ENSMUST00000097448 2905 ntBASIC19.25■□□□□ 0.67
Uba52P62984 Hey1-201ENSMUST00000042412 2423 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Uba52P62984 Apcdd1-201ENSMUST00000096554 2799 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Uba52P62984 Tmcc1-202ENSMUST00000088896 5838 ntAPPRIS P2 TSL 1 (best) BASIC19.24■□□□□ 0.67
Uba52P62984 Fam91a1-201ENSMUST00000037270 5560 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Uba52P62984 Dcbld2-201ENSMUST00000046663 6561 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Uba52P62984 Pitx2-202ENSMUST00000042587 2271 ntAPPRIS ALT1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Uba52P62984 Cys1-207ENSMUST00000186602 1757 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Uba52P62984 Klhdc10-202ENSMUST00000068259 5901 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Uba52P62984 Suv39h2-202ENSMUST00000060618 1831 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
Uba52P62984 Gga1-201ENSMUST00000041587 3034 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Uba52P62984 Kcnip2-202ENSMUST00000079431 2302 ntAPPRIS ALT1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Uba52P62984 Fank1-204ENSMUST00000209511 1392 ntTSL 5 BASIC19.23■□□□□ 0.67
Uba52P62984 March2-206ENSMUST00000173329 2566 ntTSL 2 BASIC19.23■□□□□ 0.67
Uba52P62984 Mcat-201ENSMUST00000061882 1893 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Uba52P62984 Mtm1-204ENSMUST00000101501 770 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
Uba52P62984 Ube2g2-204ENSMUST00000174510 2031 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Uba52P62984 Slc30a1-201ENSMUST00000044954 5244 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Uba52P62984 AC131739.1-201ENSMUST00000221692 1245 ntBASIC19.22■□□□□ 0.67
Uba52P62984 AC124392.1-201ENSMUST00000225172 5324 ntBASIC19.22■□□□□ 0.67
Uba52P62984 Arrdc2-201ENSMUST00000002989 2355 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Uba52P62984 Fbxl14-201ENSMUST00000032094 2963 ntAPPRIS P1 BASIC19.22■□□□□ 0.67
Uba52P62984 Hif1a-203ENSMUST00000110464 1759 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
Uba52P62984 4931440P22Rik-201ENSMUST00000099076 1786 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
Uba52P62984 B4galt6-201ENSMUST00000070080 5808 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Uba52P62984 1810026B05Rik-203ENSMUST00000184587 5738 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
Uba52P62984 Mfn1-201ENSMUST00000091257 4562 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Uba52P62984 2810002D19Rik-201ENSMUST00000152313 2040 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
Uba52P62984 Cacfd1-204ENSMUST00000114006 1648 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Uba52P62984 Stat5b-201ENSMUST00000004143 5062 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Uba52P62984 Fam193a-202ENSMUST00000180376 5536 ntAPPRIS P5 TSL 5 BASIC19.2■□□□□ 0.66
Uba52P62984 1810049J17Rik-201ENSMUST00000180521 462 ntAPPRIS P1 BASIC19.2■□□□□ 0.66
Uba52P62984 Pard6a-201ENSMUST00000093195 1265 ntAPPRIS P3 TSL 1 (best) BASIC19.2■□□□□ 0.66
Uba52P62984 Dhrs13os-201ENSMUST00000150471 2429 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
Uba52P62984 Actr5-201ENSMUST00000045644 2402 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Uba52P62984 Fam126a-206ENSMUST00000197617 2288 ntTSL 5 BASIC19.2■□□□□ 0.66
Uba52P62984 Tmem200b-201ENSMUST00000094666 1370 ntAPPRIS P1 BASIC19.19■□□□□ 0.66
Uba52P62984 Trim9-208ENSMUST00000221370 2393 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
Uba52P62984 Snx3-203ENSMUST00000105500 753 ntTSL 5 BASIC19.19■□□□□ 0.66
Uba52P62984 Fbxw4-201ENSMUST00000046869 2068 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Uba52P62984 Stard10-202ENSMUST00000163799 1723 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
Uba52P62984 Kcmf1-204ENSMUST00000204598 1743 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
Uba52P62984 Slc16a8-201ENSMUST00000039752 1806 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Uba52P62984 Gnpnat1-201ENSMUST00000046191 2788 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Uba52P62984 Ing2-201ENSMUST00000080353 2812 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Uba52P62984 Pde8b-204ENSMUST00000159608 2370 ntTSL 5 BASIC19.18■□□□□ 0.66
Uba52P62984 Mad2l2-202ENSMUST00000084129 1162 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Uba52P62984 Mlx-201ENSMUST00000017945 1965 ntAPPRIS P3 TSL 1 (best) BASIC19.18■□□□□ 0.66
Uba52P62984 Hgh1-201ENSMUST00000023213 1959 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Uba52P62984 Mppe1-201ENSMUST00000073054 2007 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Uba52P62984 Eml4-201ENSMUST00000049503 5109 ntAPPRIS P3 TSL 1 (best) BASIC19.18■□□□□ 0.66
Uba52P62984 Ksr1-201ENSMUST00000018478 5495 ntAPPRIS P1 TSL 5 BASIC19.18■□□□□ 0.66
Uba52P62984 Crls1-201ENSMUST00000028835 1924 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Retrieved 100 of 76,532 protein–RNA pairs in 9.9 ms