Protein–RNA interactions for Protein: P56371

Rab4a, Ras-related protein Rab-4A, mousemouse

Predictions only

Length 218 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rab4aP56371 Hnrnpd-211ENSMUST00000172361 6811 ntAPPRIS P4 TSL 1 (best) BASIC17.73■□□□□ 0.43
Rab4aP56371 Mbd2-202ENSMUST00000114946 1290 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
Rab4aP56371 Egr4-201ENSMUST00000095759 2148 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Rab4aP56371 Lrfn1-203ENSMUST00000189877 1852 ntAPPRIS P3 TSL 5 BASIC17.73■□□□□ 0.43
Rab4aP56371 Usp39-201ENSMUST00000070345 2244 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Rab4aP56371 Ewsr1-205ENSMUST00000102930 2174 ntAPPRIS ALT2 TSL 5 BASIC17.72■□□□□ 0.43
Rab4aP56371 Fbxl14-201ENSMUST00000032094 2963 ntAPPRIS P1 BASIC17.71■□□□□ 0.43
Rab4aP56371 Pde7a-202ENSMUST00000099195 6298 ntAPPRIS ALT1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Rab4aP56371 Rab22a-202ENSMUST00000109110 849 ntTSL 5 BASIC17.71■□□□□ 0.43
Rab4aP56371 Svbp-202ENSMUST00000097908 832 ntTSL 2 BASIC17.71■□□□□ 0.43
Rab4aP56371 Foxg1-201ENSMUST00000021333 2941 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Rab4aP56371 Gm12184-201ENSMUST00000104959 1310 ntAPPRIS P1 BASIC17.71■□□□□ 0.42
Rab4aP56371 D030046N08Rik-201ENSMUST00000162318 1570 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
Rab4aP56371 Soga1-201ENSMUST00000069098 7864 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Rab4aP56371 Gm25262-201ENSMUST00000174934 133 ntBASIC17.7■□□□□ 0.42
Rab4aP56371 Pou2f2-206ENSMUST00000108418 1934 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
Rab4aP56371 AC123857.1-201ENSMUST00000181053 2312 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
Rab4aP56371 Shb-201ENSMUST00000061986 2244 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Rab4aP56371 Syt7-203ENSMUST00000169121 6834 ntTSL 5 BASIC17.69■□□□□ 0.42
Rab4aP56371 Gm15043-201ENSMUST00000118843 1543 ntBASIC17.69■□□□□ 0.42
Rab4aP56371 Gm27322-201ENSMUST00000184007 104 ntBASIC17.69■□□□□ 0.42
Rab4aP56371 Mapk3-201ENSMUST00000050201 1267 ntAPPRIS ALT2 TSL 3 BASIC17.69■□□□□ 0.42
Rab4aP56371 Cnnm1-202ENSMUST00000223787 2931 ntAPPRIS ALT2 BASIC17.69■□□□□ 0.42
Rab4aP56371 Gm26617-201ENSMUST00000180381 4429 ntTSL 3 BASIC17.69■□□□□ 0.42
Rab4aP56371 Uba2-201ENSMUST00000102746 2579 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Rab4aP56371 Bok-201ENSMUST00000027499 1468 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Rab4aP56371 Mat2b-201ENSMUST00000040167 1949 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Rab4aP56371 Picalm-212ENSMUST00000208730 3427 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
Rab4aP56371 Kmt2b-201ENSMUST00000006470 8469 ntAPPRIS ALT2 TSL 5 BASIC17.68■□□□□ 0.42
Rab4aP56371 Cacnb3-202ENSMUST00000109150 2670 ntTSL 5 BASIC17.68■□□□□ 0.42
Rab4aP56371 Insm2-201ENSMUST00000051857 2660 ntAPPRIS P1 BASIC17.68■□□□□ 0.42
Rab4aP56371 Gm43006-201ENSMUST00000197702 1602 ntBASIC17.68■□□□□ 0.42
Rab4aP56371 Dhrs13os-201ENSMUST00000150471 2429 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
Rab4aP56371 Kcnmb4os2-201ENSMUST00000080943 1571 ntTSL 5 BASIC17.67■□□□□ 0.42
Rab4aP56371 Clec2l-201ENSMUST00000114874 1428 ntAPPRIS P1 TSL 2 BASIC17.67■□□□□ 0.42
Rab4aP56371 Ppp1r14c-201ENSMUST00000043374 2617 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Rab4aP56371 Kansl1-205ENSMUST00000106977 5510 ntAPPRIS P2 TSL 1 (best) BASIC17.67■□□□□ 0.42
Rab4aP56371 Atpaf1-203ENSMUST00000176047 2330 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Rab4aP56371 Wnt10b-203ENSMUST00000226610 2217 ntAPPRIS P1 BASIC17.67■□□□□ 0.42
Rab4aP56371 Wnt10b-201ENSMUST00000023732 2226 ntAPPRIS P1 TSL 5 BASIC17.67■□□□□ 0.42
Rab4aP56371 Slc25a33-201ENSMUST00000105686 1887 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Rab4aP56371 Itga9-201ENSMUST00000044165 7020 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Rab4aP56371 Tlk2-202ENSMUST00000092537 2743 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
Rab4aP56371 Ranbp1-202ENSMUST00000115645 1085 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Rab4aP56371 Bpifb4-202ENSMUST00000109757 2420 ntAPPRIS P2 TSL 5 BASIC17.66■□□□□ 0.42
Rab4aP56371 Popdc3-201ENSMUST00000019994 1853 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Rab4aP56371 Ank1-207ENSMUST00000118733 8201 ntAPPRIS ALT2 TSL 1 (best) BASIC17.65■□□□□ 0.42
Rab4aP56371 Bok-205ENSMUST00000201863 883 ntAPPRIS P1 TSL 5 BASIC17.65■□□□□ 0.42
Rab4aP56371 Mlx-201ENSMUST00000017945 1965 ntAPPRIS P3 TSL 1 (best) BASIC17.65■□□□□ 0.42
Rab4aP56371 Zfp768-202ENSMUST00000205266 2513 ntAPPRIS ALT2 TSL 5 BASIC17.65■□□□□ 0.42
Rab4aP56371 Rnf26-206ENSMUST00000216511 2257 ntAPPRIS ALT2 TSL 5 BASIC17.64■□□□□ 0.41
Rab4aP56371 Actr3b-202ENSMUST00000128727 2031 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
Rab4aP56371 Iqsec1-210ENSMUST00000212100 3500 ntTSL 5 BASIC17.64■□□□□ 0.41
Rab4aP56371 Arhgap9-204ENSMUST00000219511 2217 ntAPPRIS ALT2 TSL 1 (best) BASIC17.63■□□□□ 0.41
Rab4aP56371 Gm17082-201ENSMUST00000166043 1091 ntBASIC17.63■□□□□ 0.41
Rab4aP56371 Arrdc2-201ENSMUST00000002989 2355 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Rab4aP56371 Rab43-203ENSMUST00000078647 4605 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Rab4aP56371 Baiap2-205ENSMUST00000106233 2442 ntAPPRIS ALT2 TSL 5 BASIC17.62■□□□□ 0.41
Rab4aP56371 Tcerg1l-201ENSMUST00000160436 2565 ntAPPRIS P1 TSL 5 BASIC17.62■□□□□ 0.41
Rab4aP56371 Ube4b-202ENSMUST00000103212 5626 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Rab4aP56371 B3gat1-203ENSMUST00000159799 2021 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
Rab4aP56371 Ints11-202ENSMUST00000120794 1884 ntTSL 5 BASIC17.61■□□□□ 0.41
Rab4aP56371 Mvb12b-201ENSMUST00000041555 4998 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Rab4aP56371 Tsg101-201ENSMUST00000014546 1949 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Rab4aP56371 Cyb561-201ENSMUST00000019734 2741 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Rab4aP56371 Mtf2-202ENSMUST00000112626 1968 ntTSL 5 BASIC17.61■□□□□ 0.41
Rab4aP56371 Serpinh1-202ENSMUST00000169437 2274 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Rab4aP56371 Hccs-201ENSMUST00000033717 2320 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Rab4aP56371 Tor1a-201ENSMUST00000028200 1401 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Rab4aP56371 Baz1a-201ENSMUST00000038926 6188 ntAPPRIS ALT2 TSL 5 BASIC17.61■□□□□ 0.41
Rab4aP56371 Smad4-201ENSMUST00000025393 3384 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Rab4aP56371 Noc2l-201ENSMUST00000179543 2785 ntAPPRIS P2 TSL 1 (best) BASIC17.61■□□□□ 0.41
Rab4aP56371 Pitpna-205ENSMUST00000179445 1665 ntAPPRIS ALT1 TSL 5 BASIC17.61■□□□□ 0.41
Rab4aP56371 Scube1-202ENSMUST00000043634 5161 ntAPPRIS ALT2 TSL 1 (best) BASIC17.6■□□□□ 0.41
Rab4aP56371 Tdp2-201ENSMUST00000038039 1957 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Rab4aP56371 Efna2-201ENSMUST00000003154 2131 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Rab4aP56371 Slc30a4-201ENSMUST00000005952 5458 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Rab4aP56371 Srsf12-201ENSMUST00000067864 2939 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Rab4aP56371 Txnrd1-208ENSMUST00000219962 2297 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Rab4aP56371 Rbfox3-206ENSMUST00000120061 2150 ntAPPRIS ALT2 TSL 5 BASIC17.59■□□□□ 0.41
Rab4aP56371 Znrf1-204ENSMUST00000171182 5466 ntTSL 3 BASIC17.58■□□□□ 0.41
Rab4aP56371 Nol4l-201ENSMUST00000035346 6399 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
Rab4aP56371 Stard10-202ENSMUST00000163799 1723 ntTSL 1 (best) BASIC17.58■□□□□ 0.41
Rab4aP56371 Hdgfl3-202ENSMUST00000107305 5887 ntAPPRIS P2 TSL 1 (best) BASIC17.58■□□□□ 0.41
Rab4aP56371 Emc10-202ENSMUST00000118808 1872 ntAPPRIS P2 TSL 1 (best) BASIC17.58■□□□□ 0.4
Rab4aP56371 Slc35a3-202ENSMUST00000120120 1791 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Rab4aP56371 Lmo2-202ENSMUST00000111140 1706 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
Rab4aP56371 Lsr-201ENSMUST00000001279 2167 ntAPPRIS P3 TSL 1 (best) BASIC17.57■□□□□ 0.4
Rab4aP56371 Gm43182-201ENSMUST00000199476 2528 ntBASIC17.57■□□□□ 0.4
Rab4aP56371 Btf3-201ENSMUST00000022163 1091 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
Rab4aP56371 Hnrnpl-211ENSMUST00000174548 2679 ntAPPRIS P1 TSL 5 BASIC17.57■□□□□ 0.4
Rab4aP56371 Ube2f-202ENSMUST00000171112 1547 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Rab4aP56371 Hoxc8-201ENSMUST00000001703 1868 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Rab4aP56371 Ablim1-208ENSMUST00000111544 2231 ntTSL 5 BASIC17.56■□□□□ 0.4
Rab4aP56371 Fam181b-201ENSMUST00000051179 2003 ntAPPRIS P1 BASIC17.56■□□□□ 0.4
Rab4aP56371 Rasa1-201ENSMUST00000109552 4563 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Rab4aP56371 Fbxo24-201ENSMUST00000031732 2161 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Rab4aP56371 Fam120aos-201ENSMUST00000180775 1780 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
Rab4aP56371 Lgr4-202ENSMUST00000111037 4988 ntTSL 5 BASIC17.55■□□□□ 0.4
Rab4aP56371 Adra1d-201ENSMUST00000103184 1899 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Retrieved 100 of 76,532 protein–RNA pairs in 12.4 ms