Protein–RNA interactions for Protein: P35276

Rab3d, Ras-related protein Rab-3D, mousemouse

Predictions only

Length 219 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rab3dP35276 Tirap-207ENSMUST00000177129 2366 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Rab3dP35276 Mtf2-202ENSMUST00000112626 1968 ntTSL 5 BASIC18.79■□□□□ 0.6
Rab3dP35276 Henmt1-201ENSMUST00000059946 1998 ntAPPRIS P2 TSL 1 (best) BASIC18.79■□□□□ 0.6
Rab3dP35276 Nckap1-202ENSMUST00000111760 4597 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
Rab3dP35276 Frmd4a-201ENSMUST00000075767 6761 ntAPPRIS ALT2 TSL 1 (best) BASIC18.79■□□□□ 0.6
Rab3dP35276 Arglu1-201ENSMUST00000048545 3197 ntAPPRIS P1 TSL 2 BASIC18.79■□□□□ 0.6
Rab3dP35276 Rnf39-201ENSMUST00000040498 1579 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Rab3dP35276 Ccdc136-206ENSMUST00000145310 1703 ntAPPRIS ALT2 TSL 5 BASIC18.79■□□□□ 0.6
Rab3dP35276 Nckap5los-201ENSMUST00000159738 1712 ntTSL 2 BASIC18.79■□□□□ 0.6
Rab3dP35276 Epb41l4b-201ENSMUST00000030142 3247 ntAPPRIS P2 TSL 1 (best) BASIC18.79■□□□□ 0.6
Rab3dP35276 Nrarp-201ENSMUST00000104999 2582 ntAPPRIS P1 BASIC18.79■□□□□ 0.6
Rab3dP35276 Rfwd2-201ENSMUST00000076894 5116 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Rab3dP35276 Thap4-206ENSMUST00000190116 5558 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Rab3dP35276 A230005M16Rik-201ENSMUST00000137661 1605 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
Rab3dP35276 Dedd-201ENSMUST00000064950 1618 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Rab3dP35276 Flot2-201ENSMUST00000072289 2621 ntAPPRIS P2 TSL 1 (best) BASIC18.78■□□□□ 0.6
Rab3dP35276 A530058N18Rik-203ENSMUST00000135729 1405 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
Rab3dP35276 Tmcc1-202ENSMUST00000088896 5838 ntAPPRIS P2 TSL 1 (best) BASIC18.78■□□□□ 0.6
Rab3dP35276 Dlx2-201ENSMUST00000024159 2473 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Rab3dP35276 Map3k15-201ENSMUST00000033665 4348 ntAPPRIS P1 TSL 5 BASIC18.78■□□□□ 0.6
Rab3dP35276 Banp-202ENSMUST00000093078 2289 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
Rab3dP35276 March9-201ENSMUST00000040307 3037 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Rab3dP35276 Susd6-203ENSMUST00000220238 2127 ntAPPRIS ALT2 TSL 1 (best) BASIC18.77■□□□□ 0.6
Rab3dP35276 Cdkn2b-201ENSMUST00000097981 1393 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Rab3dP35276 Notum-202ENSMUST00000106177 2212 ntAPPRIS P1 TSL 5 BASIC18.77■□□□□ 0.59
Rab3dP35276 Mta3-204ENSMUST00000112352 2674 ntAPPRIS ALT2 TSL 1 (best) BASIC18.76■□□□□ 0.59
Rab3dP35276 Krt10-201ENSMUST00000103131 2094 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Rab3dP35276 Fam193a-202ENSMUST00000180376 5536 ntAPPRIS P5 TSL 5 BASIC18.76■□□□□ 0.59
Rab3dP35276 Rhbdl1-201ENSMUST00000026831 1711 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Rab3dP35276 Tmem9b-201ENSMUST00000033333 1703 ntAPPRIS P2 TSL 1 (best) BASIC18.76■□□□□ 0.59
Rab3dP35276 Dgat2-201ENSMUST00000033001 2262 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Rab3dP35276 Kcnc3-203ENSMUST00000207493 2731 ntAPPRIS ALT2 TSL 5 BASIC18.76■□□□□ 0.59
Rab3dP35276 Agps-202ENSMUST00000111952 2589 ntTSL 2 BASIC18.76■□□□□ 0.59
Rab3dP35276 Gng12-204ENSMUST00000114225 1876 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Rab3dP35276 AI837181-202ENSMUST00000159759 1515 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Rab3dP35276 Gm10762-201ENSMUST00000099385 1133 ntAPPRIS P1 BASIC18.75■□□□□ 0.59
Rab3dP35276 Tmem55b-201ENSMUST00000049312 1594 ntAPPRIS ALT1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Rab3dP35276 Lrrc24-201ENSMUST00000036247 1758 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
Rab3dP35276 Dapk1-202ENSMUST00000077453 5491 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Rab3dP35276 Fam91a1-201ENSMUST00000037270 5560 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Rab3dP35276 Mprip-202ENSMUST00000072031 8718 ntAPPRIS P4 TSL 1 (best) BASIC18.74■□□□□ 0.59
Rab3dP35276 Gng3-201ENSMUST00000096259 1699 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Rab3dP35276 E130102H24Rik-201ENSMUST00000144604 741 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
Rab3dP35276 Eif2ak3-204ENSMUST00000162950 927 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
Rab3dP35276 1810049J17Rik-201ENSMUST00000180521 462 ntAPPRIS P1 BASIC18.74■□□□□ 0.59
Rab3dP35276 2210008F06Rik-201ENSMUST00000180805 1082 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
Rab3dP35276 Mlycd-201ENSMUST00000098367 2128 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Rab3dP35276 Ccnl2-201ENSMUST00000030944 2442 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Rab3dP35276 Jmjd6-201ENSMUST00000047616 1668 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Rab3dP35276 Triobp-201ENSMUST00000109687 2570 ntAPPRIS ALT2 TSL 1 (best) BASIC18.73■□□□□ 0.59
Rab3dP35276 Gpr137c-205ENSMUST00000227009 771 ntAPPRIS ALT2 BASIC18.73■□□□□ 0.59
Rab3dP35276 Pitx2-202ENSMUST00000042587 2271 ntAPPRIS ALT1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Rab3dP35276 Npas1-201ENSMUST00000002053 2091 ntAPPRIS P1 TSL 5 BASIC18.73■□□□□ 0.59
Rab3dP35276 Gipc1-201ENSMUST00000019577 1522 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Rab3dP35276 Dhrs13-201ENSMUST00000021187 1779 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Rab3dP35276 Ammecr1-201ENSMUST00000041317 5437 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Rab3dP35276 Zfp513-201ENSMUST00000031562 2213 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
Rab3dP35276 Acot3-202ENSMUST00000120927 1854 ntAPPRIS ALT2 TSL 1 (best) BASIC18.72■□□□□ 0.59
Rab3dP35276 Kctd5-201ENSMUST00000017090 2443 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Rab3dP35276 Cotl1-201ENSMUST00000034285 1596 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Rab3dP35276 Dirc2-201ENSMUST00000023554 5395 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Rab3dP35276 Gm14121-201ENSMUST00000121441 1380 ntBASIC18.71■□□□□ 0.59
Rab3dP35276 Cdan1-201ENSMUST00000110700 5996 ntAPPRIS ALT2 TSL 5 BASIC18.71■□□□□ 0.59
Rab3dP35276 Crip2-201ENSMUST00000084882 1439 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Rab3dP35276 Hp1bp3-205ENSMUST00000105827 5155 ntAPPRIS ALT2 TSL 5 BASIC18.71■□□□□ 0.59
Rab3dP35276 Actr5-201ENSMUST00000045644 2402 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Rab3dP35276 Slc15a4-201ENSMUST00000031367 2732 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Rab3dP35276 Gmeb1-202ENSMUST00000105964 1925 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Rab3dP35276 Manf-202ENSMUST00000159283 2247 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Rab3dP35276 Serpinb6a-206ENSMUST00000167163 1654 ntAPPRIS P1 TSL 5 BASIC18.7■□□□□ 0.58
Rab3dP35276 BC037032-205ENSMUST00000187080 508 ntTSL 5 BASIC18.7■□□□□ 0.58
Rab3dP35276 Mnx1-202ENSMUST00000165512 2245 ntAPPRIS P2 TSL 1 (best) BASIC18.7■□□□□ 0.58
Rab3dP35276 Hif1a-203ENSMUST00000110464 1759 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
Rab3dP35276 P4htm-201ENSMUST00000006853 1841 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Rab3dP35276 Grap-201ENSMUST00000004959 1662 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Rab3dP35276 Chst14-201ENSMUST00000099546 2090 ntAPPRIS P1 BASIC18.69■□□□□ 0.58
Rab3dP35276 Pou2f2-204ENSMUST00000108416 1754 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
Rab3dP35276 Srsf9-201ENSMUST00000031513 1162 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Rab3dP35276 Fbxl17-201ENSMUST00000024761 4925 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Rab3dP35276 Nudt9-201ENSMUST00000031250 1488 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Rab3dP35276 Cnot6-201ENSMUST00000020624 2498 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
Rab3dP35276 Spire2-201ENSMUST00000010298 2330 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Rab3dP35276 Tmem70-203ENSMUST00000177501 1636 ntAPPRIS P3 TSL 1 (best) BASIC18.68■□□□□ 0.58
Rab3dP35276 1810026B05Rik-206ENSMUST00000187421 519 ntTSL 3 BASIC18.68■□□□□ 0.58
Rab3dP35276 A230087F16Rik-201ENSMUST00000181055 2098 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
Rab3dP35276 Mras-201ENSMUST00000035045 4701 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Rab3dP35276 Gm6934-201ENSMUST00000194780 1905 ntBASIC18.68■□□□□ 0.58
Rab3dP35276 Hand2-201ENSMUST00000040104 2351 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Rab3dP35276 Vmac-201ENSMUST00000067931 2174 ntAPPRIS P3 TSL 1 (best) BASIC18.68■□□□□ 0.58
Rab3dP35276 Bckdhb-201ENSMUST00000034801 1472 ntAPPRIS P3 TSL 1 (best) BASIC18.67■□□□□ 0.58
Rab3dP35276 Antxr1-204ENSMUST00000204805 2156 ntAPPRIS ALT2 TSL 5 BASIC18.67■□□□□ 0.58
Rab3dP35276 Stard3nl-210ENSMUST00000222869 1030 ntTSL 5 BASIC18.67■□□□□ 0.58
Rab3dP35276 Znrf3-201ENSMUST00000109867 6311 ntAPPRIS P3 TSL 5 BASIC18.67■□□□□ 0.58
Rab3dP35276 Magi2-205ENSMUST00000197354 4785 ntAPPRIS ALT2 TSL 5 BASIC18.66■□□□□ 0.58
Rab3dP35276 Adgrb1-202ENSMUST00000170845 2704 ntTSL 5 BASIC18.66■□□□□ 0.58
Rab3dP35276 Osbp-201ENSMUST00000025590 4578 ntAPPRIS P1 TSL 5 BASIC18.66■□□□□ 0.58
Rab3dP35276 Kctd2-201ENSMUST00000103035 1764 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Rab3dP35276 Cdv3-205ENSMUST00000189896 1023 ntAPPRIS ALT2 TSL 1 (best) BASIC18.66■□□□□ 0.58
Rab3dP35276 Gm9887-201ENSMUST00000053451 624 ntAPPRIS P1 BASIC18.66■□□□□ 0.58
Rab3dP35276 Mfsd4b2-201ENSMUST00000045526 2285 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Retrieved 100 of 76,532 protein–RNA pairs in 13.5 ms