Protein–RNA interactions for Protein: P31650

Slc6a11, Sodium- and chloride-dependent GABA transporter 3, mousemouse

Predictions only

Length 627 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Slc6a11P31650 Bean1-205ENSMUST00000212979 2131 ntAPPRIS P4 TSL 5 BASIC21.28■■□□□ 1
Slc6a11P31650 Rfxap-201ENSMUST00000044373 2162 ntAPPRIS ALT2 TSL 1 (best) BASIC21.27■■□□□ 1
Slc6a11P31650 Lrrc14-201ENSMUST00000036423 2093 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
Slc6a11P31650 Abhd17c-201ENSMUST00000117085 2238 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
Slc6a11P31650 A830010M20Rik-202ENSMUST00000094541 1134 ntTSL 5 BASIC21.27■■□□□ 1
Slc6a11P31650 Pgbd5-204ENSMUST00000140012 3222 ntAPPRIS ALT2 TSL 5 BASIC21.27■■□□□ 1
Slc6a11P31650 Rnf39-201ENSMUST00000040498 1579 ntAPPRIS P1 TSL 1 (best) BASIC21.27■□□□□ 0.99
Slc6a11P31650 Spats2-201ENSMUST00000063517 3065 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
Slc6a11P31650 Heca-201ENSMUST00000037879 5098 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
Slc6a11P31650 Klhl22-201ENSMUST00000117192 2754 ntTSL 5 BASIC21.25■□□□□ 0.99
Slc6a11P31650 Mapkap1-201ENSMUST00000113123 1530 ntTSL 5 BASIC21.25■□□□□ 0.99
Slc6a11P31650 Med25-205ENSMUST00000207278 2287 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
Slc6a11P31650 Foxo6-201ENSMUST00000102656 2615 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
Slc6a11P31650 Purg-202ENSMUST00000078058 1795 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
Slc6a11P31650 Impdh1-201ENSMUST00000078155 2437 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
Slc6a11P31650 Tmem200b-201ENSMUST00000094666 1370 ntAPPRIS P1 BASIC21.24■□□□□ 0.99
Slc6a11P31650 Smurf1-203ENSMUST00000110677 5420 ntTSL 5 BASIC21.24■□□□□ 0.99
Slc6a11P31650 Homer3-203ENSMUST00000110124 2445 ntAPPRIS ALT1 TSL 5 BASIC21.24■□□□□ 0.99
Slc6a11P31650 Kctd5-201ENSMUST00000017090 2443 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
Slc6a11P31650 Gm4419-202ENSMUST00000226239 1431 ntBASIC21.24■□□□□ 0.99
Slc6a11P31650 Rab4b-201ENSMUST00000093040 1192 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
Slc6a11P31650 Ccnl2-201ENSMUST00000030944 2442 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
Slc6a11P31650 Insm2-201ENSMUST00000051857 2660 ntAPPRIS P1 BASIC21.23■□□□□ 0.99
Slc6a11P31650 AC131739.1-201ENSMUST00000221692 1245 ntBASIC21.23■□□□□ 0.99
Slc6a11P31650 Gm6311-201ENSMUST00000073790 878 ntBASIC21.23■□□□□ 0.99
Slc6a11P31650 Luc7l3-203ENSMUST00000107821 2050 ntAPPRIS P1 TSL 5 BASIC21.23■□□□□ 0.99
Slc6a11P31650 Znrf2-201ENSMUST00000079869 5886 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
Slc6a11P31650 Fbxl14-201ENSMUST00000032094 2963 ntAPPRIS P1 BASIC21.23■□□□□ 0.99
Slc6a11P31650 Hexdc-201ENSMUST00000038831 2378 ntAPPRIS ALT2 TSL 5 BASIC21.22■□□□□ 0.99
Slc6a11P31650 E330009J07Rik-201ENSMUST00000039008 1949 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
Slc6a11P31650 E130218I03Rik-204ENSMUST00000131447 888 ntAPPRIS P1 TSL 5 BASIC21.22■□□□□ 0.99
Slc6a11P31650 Mef2a-203ENSMUST00000076325 2664 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
Slc6a11P31650 Ubl3-204ENSMUST00000201595 2064 ntAPPRIS P1 TSL 2 BASIC21.22■□□□□ 0.99
Slc6a11P31650 Homer3-206ENSMUST00000140212 2608 ntAPPRIS P3 TSL 1 (best) BASIC21.22■□□□□ 0.99
Slc6a11P31650 Igfbp3-201ENSMUST00000020702 2421 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
Slc6a11P31650 Arpc2-203ENSMUST00000113820 1439 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
Slc6a11P31650 Ccnyl1-203ENSMUST00000187170 1506 ntAPPRIS P1 TSL 5 BASIC21.21■□□□□ 0.99
Slc6a11P31650 Dbp-201ENSMUST00000080885 1837 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
Slc6a11P31650 Otud5-204ENSMUST00000115667 2708 ntAPPRIS ALT2 TSL 5 BASIC21.21■□□□□ 0.99
Slc6a11P31650 Gng3-201ENSMUST00000096259 1699 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
Slc6a11P31650 Slc17a7-201ENSMUST00000085374 2915 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
Slc6a11P31650 Ltk-201ENSMUST00000028759 3080 ntAPPRIS P4 TSL 1 (best) BASIC21.2■□□□□ 0.99
Slc6a11P31650 Flot2-201ENSMUST00000072289 2621 ntAPPRIS P2 TSL 1 (best) BASIC21.2■□□□□ 0.98
Slc6a11P31650 Terf2-204ENSMUST00000133925 2666 ntAPPRIS P3 TSL 1 (best) BASIC21.2■□□□□ 0.98
Slc6a11P31650 Kcnip2-208ENSMUST00000161886 693 ntAPPRIS P3 TSL 1 (best) BASIC21.2■□□□□ 0.98
Slc6a11P31650 Pard6a-201ENSMUST00000093195 1265 ntAPPRIS P3 TSL 1 (best) BASIC21.2■□□□□ 0.98
Slc6a11P31650 Klc1-201ENSMUST00000084941 2504 ntAPPRIS P3 TSL 1 (best) BASIC21.19■□□□□ 0.98
Slc6a11P31650 Tmem70-203ENSMUST00000177501 1636 ntAPPRIS P3 TSL 1 (best) BASIC21.19■□□□□ 0.98
Slc6a11P31650 Habp4-201ENSMUST00000021929 2564 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
Slc6a11P31650 Nckap5los-201ENSMUST00000159738 1712 ntTSL 2 BASIC21.19■□□□□ 0.98
Slc6a11P31650 Kctd2-201ENSMUST00000103035 1764 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
Slc6a11P31650 Fank1-204ENSMUST00000209511 1392 ntTSL 5 BASIC21.19■□□□□ 0.98
Slc6a11P31650 Ube2q1-201ENSMUST00000038356 3077 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
Slc6a11P31650 Mid2-201ENSMUST00000112988 2525 ntTSL 5 BASIC21.19■□□□□ 0.98
Slc6a11P31650 Ing1-201ENSMUST00000054399 2814 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
Slc6a11P31650 Btbd2-202ENSMUST00000126980 2449 ntAPPRIS ALT2 TSL 5 BASIC21.18■□□□□ 0.98
Slc6a11P31650 Brf1-201ENSMUST00000011302 2615 ntAPPRIS P1 TSL 5 BASIC21.18■□□□□ 0.98
Slc6a11P31650 Vegfb-202ENSMUST00000130048 1158 ntAPPRIS ALT2 TSL 1 (best) BASIC21.18■□□□□ 0.98
Slc6a11P31650 Tirap-207ENSMUST00000177129 2366 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
Slc6a11P31650 B3gat1-203ENSMUST00000159799 2021 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
Slc6a11P31650 Mta3-204ENSMUST00000112352 2674 ntAPPRIS ALT2 TSL 1 (best) BASIC21.17■□□□□ 0.98
Slc6a11P31650 Phactr2-202ENSMUST00000105543 2735 ntAPPRIS P2 TSL 1 (best) BASIC21.17■□□□□ 0.98
Slc6a11P31650 Grb2-201ENSMUST00000021090 2709 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
Slc6a11P31650 Carm1-201ENSMUST00000034703 3220 ntAPPRIS P3 TSL 1 (best) BASIC21.17■□□□□ 0.98
Slc6a11P31650 Rpl38-203ENSMUST00000106599 457 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
Slc6a11P31650 Zcrb1-201ENSMUST00000076070 877 ntAPPRIS P3 TSL 1 (best) BASIC21.17■□□□□ 0.98
Slc6a11P31650 Mlycd-201ENSMUST00000098367 2128 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
Slc6a11P31650 Adgrb1-202ENSMUST00000170845 2704 ntTSL 5 BASIC21.17■□□□□ 0.98
Slc6a11P31650 Foxk2-201ENSMUST00000106113 5029 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
Slc6a11P31650 Manf-202ENSMUST00000159283 2247 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
Slc6a11P31650 Mapk15-201ENSMUST00000089669 1929 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
Slc6a11P31650 Emc10-202ENSMUST00000118808 1872 ntAPPRIS P2 TSL 1 (best) BASIC21.16■□□□□ 0.98
Slc6a11P31650 Arrdc2-201ENSMUST00000002989 2355 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
Slc6a11P31650 Usp21-203ENSMUST00000111306 2185 ntAPPRIS ALT1 TSL 1 (best) BASIC21.15■□□□□ 0.98
Slc6a11P31650 Terf2-202ENSMUST00000068421 2667 ntAPPRIS ALT2 TSL 5 BASIC21.14■□□□□ 0.98
Slc6a11P31650 Henmt1-201ENSMUST00000059946 1998 ntAPPRIS P2 TSL 1 (best) BASIC21.14■□□□□ 0.98
Slc6a11P31650 Dnajc19-202ENSMUST00000108195 659 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
Slc6a11P31650 Ybx2-205ENSMUST00000149194 1235 ntTSL 5 BASIC21.14■□□□□ 0.97
Slc6a11P31650 Znrf1-207ENSMUST00000173506 1238 ntAPPRIS P1 TSL 2 BASIC21.14■□□□□ 0.97
Slc6a11P31650 Usp12-201ENSMUST00000085614 4327 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
Slc6a11P31650 Ltk-205ENSMUST00000140224 2240 ntAPPRIS ALT2 TSL 1 (best) BASIC21.13■□□□□ 0.97
Slc6a11P31650 Ltk-206ENSMUST00000182203 2232 ntAPPRIS ALT2 TSL 1 (best) BASIC21.13■□□□□ 0.97
Slc6a11P31650 P4ha3-201ENSMUST00000057023 2361 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
Slc6a11P31650 A030005K14Rik-201ENSMUST00000193762 1093 ntAPPRIS P1 BASIC21.13■□□□□ 0.97
Slc6a11P31650 Gm44957-202ENSMUST00000205137 448 ntTSL 3 BASIC21.13■□□□□ 0.97
Slc6a11P31650 Dctpp1-201ENSMUST00000035276 676 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
Slc6a11P31650 Acvr2b-201ENSMUST00000035093 1729 ntTSL 5 BASIC21.12■□□□□ 0.97
Slc6a11P31650 Phf14-203ENSMUST00000115511 3336 ntAPPRIS P1 TSL 5 BASIC21.12■□□□□ 0.97
Slc6a11P31650 Acot3-202ENSMUST00000120927 1854 ntAPPRIS ALT2 TSL 1 (best) BASIC21.12■□□□□ 0.97
Slc6a11P31650 Mrpl23-201ENSMUST00000038675 692 ntAPPRIS P2 TSL 1 (best) BASIC21.12■□□□□ 0.97
Slc6a11P31650 Lrrc24-201ENSMUST00000036247 1758 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
Slc6a11P31650 Apcdd1-201ENSMUST00000096554 2799 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
Slc6a11P31650 Kmt5a-201ENSMUST00000059580 2739 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
Slc6a11P31650 Fam89a-201ENSMUST00000055257 1338 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
Slc6a11P31650 Lrp2-202ENSMUST00000092551 2228 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
Slc6a11P31650 AC167019.3-201ENSMUST00000228225 1266 ntBASIC21.11■□□□□ 0.97
Slc6a11P31650 B230322F03Rik-201ENSMUST00000181932 1569 ntBASIC21.1■□□□□ 0.97
Slc6a11P31650 Msl2-202ENSMUST00000189616 2612 ntTSL 5 BASIC21.09■□□□□ 0.97
Slc6a11P31650 Msl1-203ENSMUST00000107485 2091 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
Slc6a11P31650 Gm15156-201ENSMUST00000148217 417 ntTSL 3 BASIC21.09■□□□□ 0.97
Retrieved 100 of 76,532 protein–RNA pairs in 11.5 ms