Protein–RNA interactions for Protein: P20040

H-2 class II histocompatibility antigen, E-Q beta chain, mousemouse

Predictions only

Length 264 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
P20040 Drd4-201ENSMUST00000026569 2799 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
P20040 Trappc6b-203ENSMUST00000217863 797 ntTSL 2 BASIC19.83■□□□□ 0.77
P20040 AW121686-201ENSMUST00000181049 2200 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
P20040 Arhgef26-201ENSMUST00000079300 5638 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
P20040 Luc7l3-203ENSMUST00000107821 2050 ntAPPRIS P1 TSL 5 BASIC19.82■□□□□ 0.76
P20040 Ltk-205ENSMUST00000140224 2240 ntAPPRIS ALT2 TSL 1 (best) BASIC19.82■□□□□ 0.76
P20040 Ltk-206ENSMUST00000182203 2232 ntAPPRIS ALT2 TSL 1 (best) BASIC19.82■□□□□ 0.76
P20040 Zfp768-202ENSMUST00000205266 2513 ntAPPRIS ALT2 TSL 5 BASIC19.81■□□□□ 0.76
P20040 Tceal3-202ENSMUST00000113100 1148 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
P20040 Krtap28-13-201ENSMUST00000188005 992 ntAPPRIS P1 BASIC19.81■□□□□ 0.76
P20040 Taf4-204ENSMUST00000227325 4380 ntAPPRIS ALT2 BASIC19.81■□□□□ 0.76
P20040 Slc17a7-201ENSMUST00000085374 2915 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
P20040 Man1a-201ENSMUST00000003843 5137 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
P20040 Tcf4-246ENSMUST00000202116 2986 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
P20040 Nsun2-208ENSMUST00000176485 2408 ntAPPRIS ALT2 TSL 5 BASIC19.8■□□□□ 0.76
P20040 Pgbd5-204ENSMUST00000140012 3222 ntAPPRIS ALT2 TSL 5 BASIC19.8■□□□□ 0.76
P20040 2700081O15Rik-202ENSMUST00000159348 4989 ntAPPRIS P1 TSL 5 BASIC19.79■□□□□ 0.76
P20040 Mxra7-201ENSMUST00000021170 2063 ntAPPRIS P3 TSL 1 (best) BASIC19.79■□□□□ 0.76
P20040 Tmbim4-204ENSMUST00000134797 486 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
P20040 Tceal3-201ENSMUST00000060904 1116 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
P20040 Purg-202ENSMUST00000078058 1795 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
P20040 3110021N24Rik-201ENSMUST00000178992 1812 ntAPPRIS P1 TSL 5 BASIC19.79■□□□□ 0.76
P20040 Ttc9-201ENSMUST00000036116 2042 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
P20040 Hgh1-201ENSMUST00000023213 1959 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
P20040 Zcchc11-201ENSMUST00000043368 6054 ntAPPRIS P2 TSL 5 BASIC19.77■□□□□ 0.76
P20040 Ing1-201ENSMUST00000054399 2814 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
P20040 Fam149b-203ENSMUST00000090499 2370 ntAPPRIS P4 TSL 1 (best) BASIC19.77■□□□□ 0.76
P20040 Hoxb9-201ENSMUST00000000010 2574 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
P20040 Mppe1-201ENSMUST00000073054 2007 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
P20040 Fus-204ENSMUST00000121616 1102 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
P20040 Klc1-201ENSMUST00000084941 2504 ntAPPRIS P3 TSL 1 (best) BASIC19.77■□□□□ 0.76
P20040 Mid2-201ENSMUST00000112988 2525 ntTSL 5 BASIC19.76■□□□□ 0.75
P20040 Nek6-202ENSMUST00000112895 1513 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
P20040 Ltk-201ENSMUST00000028759 3080 ntAPPRIS P4 TSL 1 (best) BASIC19.75■□□□□ 0.75
P20040 Serpinb6a-206ENSMUST00000167163 1654 ntAPPRIS P1 TSL 5 BASIC19.75■□□□□ 0.75
P20040 Gm37136-201ENSMUST00000194368 194 ntBASIC19.75■□□□□ 0.75
P20040 Brf1-201ENSMUST00000011302 2615 ntAPPRIS P1 TSL 5 BASIC19.75■□□□□ 0.75
P20040 H3f3aos-201ENSMUST00000097448 2905 ntBASIC19.75■□□□□ 0.75
P20040 C1galt1-201ENSMUST00000040159 6092 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
P20040 Prph-202ENSMUST00000047104 1865 ntAPPRIS P3 TSL 1 (best) BASIC19.74■□□□□ 0.75
P20040 Chtf8-205ENSMUST00000176515 694 ntTSL 2 BASIC19.74■□□□□ 0.75
P20040 Dbp-204ENSMUST00000211513 1156 ntTSL 5 BASIC19.74■□□□□ 0.75
P20040 Pard6a-201ENSMUST00000093195 1265 ntAPPRIS P3 TSL 1 (best) BASIC19.74■□□□□ 0.75
P20040 Spsb3-202ENSMUST00000068508 2004 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
P20040 Kcnk12-201ENSMUST00000055221 1936 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
P20040 Whrn-202ENSMUST00000063672 2804 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
P20040 A330041J22Rik-201ENSMUST00000150367 1825 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
P20040 Tmem55b-201ENSMUST00000049312 1594 ntAPPRIS ALT1 TSL 1 (best) BASIC19.74■□□□□ 0.75
P20040 Coro1b-201ENSMUST00000008893 1888 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
P20040 Tmem98-201ENSMUST00000040865 1633 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
P20040 Zcrb1-201ENSMUST00000076070 877 ntAPPRIS P3 TSL 1 (best) BASIC19.73■□□□□ 0.75
P20040 Terf2-204ENSMUST00000133925 2666 ntAPPRIS P3 TSL 1 (best) BASIC19.73■□□□□ 0.75
P20040 Gnl1-201ENSMUST00000087200 2848 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
P20040 Btbd2-202ENSMUST00000126980 2449 ntAPPRIS ALT2 TSL 5 BASIC19.73■□□□□ 0.75
P20040 Hibadh-201ENSMUST00000031788 1825 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
P20040 Ccdc136-206ENSMUST00000145310 1703 ntAPPRIS ALT2 TSL 5 BASIC19.72■□□□□ 0.75
P20040 Carm1-201ENSMUST00000034703 3220 ntAPPRIS P3 TSL 1 (best) BASIC19.72■□□□□ 0.75
P20040 1110008P14Rik-201ENSMUST00000048792 680 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
P20040 Nudt9-201ENSMUST00000031250 1488 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
P20040 Med25-205ENSMUST00000207278 2287 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
P20040 Tsen34-201ENSMUST00000038521 1365 ntAPPRIS P1 TSL 5 BASIC19.71■□□□□ 0.75
P20040 AC167019.3-201ENSMUST00000228225 1266 ntBASIC19.71■□□□□ 0.75
P20040 Ccdc142-201ENSMUST00000101254 2317 ntAPPRIS P1 TSL 5 BASIC19.71■□□□□ 0.75
P20040 Pex10-201ENSMUST00000103180 1688 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
P20040 Gm42699-201ENSMUST00000198104 1657 ntBASIC19.71■□□□□ 0.75
P20040 Lrp2-202ENSMUST00000092551 2228 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
P20040 Lemd3-202ENSMUST00000119944 4743 ntAPPRIS P2 TSL 1 (best) BASIC19.71■□□□□ 0.75
P20040 Fbxw4-201ENSMUST00000046869 2068 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
P20040 Zranb1-202ENSMUST00000106157 5008 ntAPPRIS P2 TSL 5 BASIC19.7■□□□□ 0.74
P20040 Rpl31-203ENSMUST00000179954 630 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
P20040 Rab43-202ENSMUST00000032135 1262 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
P20040 Nrxn1-213ENSMUST00000172466 2477 ntTSL 5 BASIC19.7■□□□□ 0.74
P20040 Dcaf15-201ENSMUST00000041367 2312 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
P20040 P4ha3-201ENSMUST00000057023 2361 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
P20040 Ppp4r2-201ENSMUST00000063854 4874 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
P20040 Gm26917-201ENSMUST00000182520 869 ntTSL 5 BASIC19.69■□□□□ 0.74
P20040 Kcnc3-203ENSMUST00000207493 2731 ntAPPRIS ALT2 TSL 5 BASIC19.69■□□□□ 0.74
P20040 Emc10-202ENSMUST00000118808 1872 ntAPPRIS P2 TSL 1 (best) BASIC19.69■□□□□ 0.74
P20040 D16Ertd472e-201ENSMUST00000114218 1271 ntAPPRIS P1 TSL 5 BASIC19.68■□□□□ 0.74
P20040 Mad2l2-202ENSMUST00000084129 1162 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
P20040 Homer3-203ENSMUST00000110124 2445 ntAPPRIS ALT1 TSL 5 BASIC19.67■□□□□ 0.74
P20040 Frmd5-201ENSMUST00000110592 2222 ntAPPRIS P1 TSL 5 BASIC19.67■□□□□ 0.74
P20040 Insm2-201ENSMUST00000051857 2660 ntAPPRIS P1 BASIC19.67■□□□□ 0.74
P20040 Terf2-202ENSMUST00000068421 2667 ntAPPRIS ALT2 TSL 5 BASIC19.67■□□□□ 0.74
P20040 Kmt5a-201ENSMUST00000059580 2739 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
P20040 Gm37847-201ENSMUST00000192163 1497 ntBASIC19.67■□□□□ 0.74
P20040 Gm31748-201ENSMUST00000194938 1497 ntBASIC19.67■□□□□ 0.74
P20040 B3gat1-203ENSMUST00000159799 2021 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
P20040 A930035D04Rik-201ENSMUST00000064013 543 ntBASIC19.66■□□□□ 0.74
P20040 Adprhl2-201ENSMUST00000102617 1672 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
P20040 Gm26536-201ENSMUST00000181072 1196 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
P20040 Asf1a-205ENSMUST00000219282 1150 ntTSL 5 BASIC19.65■□□□□ 0.74
P20040 Gm4799-201ENSMUST00000095396 657 ntBASIC19.65■□□□□ 0.74
P20040 Esrra-201ENSMUST00000025906 2242 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
P20040 Rnf111-204ENSMUST00000213647 4961 ntAPPRIS ALT2 TSL 1 (best) BASIC19.65■□□□□ 0.74
P20040 Lrrc14-201ENSMUST00000036423 2093 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.74
P20040 Krtap17-1-201ENSMUST00000105049 761 ntAPPRIS P1 BASIC19.64■□□□□ 0.73
P20040 Gm6311-201ENSMUST00000073790 878 ntBASIC19.64■□□□□ 0.73
P20040 Ccnyl1-203ENSMUST00000187170 1506 ntAPPRIS P1 TSL 5 BASIC19.64■□□□□ 0.73
P20040 Dnttip1-201ENSMUST00000017443 1664 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Retrieved 100 of 76,532 protein–RNA pairs in 34 ms