Protein–RNA interactions for Protein: O35900

Lsm2, U6 snRNA-associated Sm-like protein LSm2, mousemouse

Known RBP Predictions only

Length 95 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lsm2O35900 Heca-201ENSMUST00000037879 5098 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Lsm2O35900 Prph-201ENSMUST00000024249 1769 ntAPPRIS ALT2 TSL 1 (best) BASIC20.21■□□□□ 0.83
Lsm2O35900 Rnaset2b-202ENSMUST00000179728 2448 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Lsm2O35900 Eif2ak3-204ENSMUST00000162950 927 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
Lsm2O35900 Ptbp3-208ENSMUST00000172768 2147 ntAPPRIS ALT2 TSL 5 BASIC20.2■□□□□ 0.82
Lsm2O35900 Gtpbp6-201ENSMUST00000077220 1617 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Lsm2O35900 B230208H11Rik-201ENSMUST00000180529 1112 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
Lsm2O35900 AC117232.3-201ENSMUST00000217817 338 ntTSL 2 BASIC20.19■□□□□ 0.82
Lsm2O35900 Gm24970-201ENSMUST00000175582 82 ntBASIC20.18■□□□□ 0.82
Lsm2O35900 Hdac3-201ENSMUST00000043498 2004 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Lsm2O35900 Paqr3-203ENSMUST00000112969 2257 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Lsm2O35900 Zfp131-205ENSMUST00000223812 663 ntBASIC20.17■□□□□ 0.82
Lsm2O35900 3110021N24Rik-201ENSMUST00000178992 1812 ntAPPRIS P1 TSL 5 BASIC20.17■□□□□ 0.82
Lsm2O35900 Ppm1g-205ENSMUST00000202294 1868 ntTSL 5 BASIC20.17■□□□□ 0.82
Lsm2O35900 Arpc2-203ENSMUST00000113820 1439 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Lsm2O35900 Slc30a3-201ENSMUST00000031037 2089 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Lsm2O35900 Xbp1-201ENSMUST00000063084 2129 ntAPPRIS P2 TSL 1 (best) BASIC20.17■□□□□ 0.82
Lsm2O35900 Ccnyl1-203ENSMUST00000187170 1506 ntAPPRIS P1 TSL 5 BASIC20.17■□□□□ 0.82
Lsm2O35900 Bend6-201ENSMUST00000062289 2487 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Lsm2O35900 Epb41l4b-201ENSMUST00000030142 3247 ntAPPRIS P2 TSL 1 (best) BASIC20.16■□□□□ 0.82
Lsm2O35900 Fbxl3-204ENSMUST00000132004 2534 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
Lsm2O35900 Rundc3a-203ENSMUST00000107103 1822 ntTSL 5 BASIC20.16■□□□□ 0.82
Lsm2O35900 Gm9887-201ENSMUST00000053451 624 ntAPPRIS P1 BASIC20.16■□□□□ 0.82
Lsm2O35900 Zswim5-201ENSMUST00000044823 5582 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Lsm2O35900 Amigo1-201ENSMUST00000050909 5030 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Lsm2O35900 Lbx1-201ENSMUST00000099401 2484 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Lsm2O35900 Qk-202ENSMUST00000097414 4658 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Lsm2O35900 Dpysl3-201ENSMUST00000025379 2106 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Lsm2O35900 Hoxa11-201ENSMUST00000048026 2287 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Lsm2O35900 Rfx5-205ENSMUST00000107260 2355 ntAPPRIS P1 TSL 5 BASIC20.15■□□□□ 0.82
Lsm2O35900 Gemin7-202ENSMUST00000117222 1023 ntAPPRIS P1 TSL 2 BASIC20.15■□□□□ 0.82
Lsm2O35900 Usp12-201ENSMUST00000085614 4327 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Lsm2O35900 Hlx-201ENSMUST00000048572 2278 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
Lsm2O35900 Cdkl3-205ENSMUST00000109078 2216 ntAPPRIS ALT2 TSL 1 (best) BASIC20.14■□□□□ 0.81
Lsm2O35900 Mpzl1-201ENSMUST00000068705 2171 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
Lsm2O35900 Kcnip2-202ENSMUST00000079431 2302 ntAPPRIS ALT1 TSL 1 (best) BASIC20.14■□□□□ 0.81
Lsm2O35900 Gm11492-201ENSMUST00000060360 1972 ntAPPRIS P1 TSL 5 BASIC20.14■□□□□ 0.81
Lsm2O35900 Cbln1-202ENSMUST00000169693 1699 ntAPPRIS P1 TSL 5 BASIC20.13■□□□□ 0.81
Lsm2O35900 Gga1-201ENSMUST00000041587 3034 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
Lsm2O35900 Pou4f1-201ENSMUST00000053016 4445 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
Lsm2O35900 Gm9397-201ENSMUST00000200125 605 ntBASIC20.12■□□□□ 0.81
Lsm2O35900 Barhl1-202ENSMUST00000113847 2160 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
Lsm2O35900 Gm20634-201ENSMUST00000090779 2956 ntBASIC20.12■□□□□ 0.81
Lsm2O35900 Acvr2b-201ENSMUST00000035093 1729 ntTSL 5 BASIC20.11■□□□□ 0.81
Lsm2O35900 Wtap-203ENSMUST00000159551 2060 ntAPPRIS P1 TSL 5 BASIC20.11■□□□□ 0.81
Lsm2O35900 Syce2-202ENSMUST00000136026 1686 ntAPPRIS P3 TSL 1 (best) BASIC20.11■□□□□ 0.81
Lsm2O35900 C1ql2-201ENSMUST00000037286 2000 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
Lsm2O35900 Qrich1-209ENSMUST00000194385 975 ntTSL 2 BASIC20.11■□□□□ 0.81
Lsm2O35900 D1Ertd622e-203ENSMUST00000149927 2703 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
Lsm2O35900 Acss2-203ENSMUST00000103142 2145 ntTSL 5 BASIC20.11■□□□□ 0.81
Lsm2O35900 Inafm2-201ENSMUST00000149978 3053 ntAPPRIS P1 BASIC20.11■□□□□ 0.81
Lsm2O35900 Tmem243-201ENSMUST00000115365 1040 ntAPPRIS P1 TSL 2 BASIC20.1■□□□□ 0.81
Lsm2O35900 Osbpl1a-209ENSMUST00000122175 1203 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
Lsm2O35900 Ccdc50-202ENSMUST00000096127 1096 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
Lsm2O35900 Sec22c-202ENSMUST00000111560 2669 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Lsm2O35900 Mgrn1-201ENSMUST00000023159 3293 ntAPPRIS ALT2 TSL 1 (best) BASIC20.1■□□□□ 0.81
Lsm2O35900 Kif1bp-201ENSMUST00000065887 2472 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Lsm2O35900 Opn3-201ENSMUST00000027809 1913 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
Lsm2O35900 Fbxl5-205ENSMUST00000121736 2144 ntTSL 1 (best) BASIC20.08■□□□□ 0.81
Lsm2O35900 1700016A09Rik-201ENSMUST00000192004 835 ntBASIC20.08■□□□□ 0.81
Lsm2O35900 Cacnb3-202ENSMUST00000109150 2670 ntTSL 5 BASIC20.08■□□□□ 0.8
Lsm2O35900 Sdccag3-203ENSMUST00000114100 2099 ntAPPRIS ALT2 TSL 5 BASIC20.07■□□□□ 0.8
Lsm2O35900 Olfm2-203ENSMUST00000215999 1895 ntAPPRIS ALT2 TSL 3 BASIC20.07■□□□□ 0.8
Lsm2O35900 Mindy2-202ENSMUST00000213380 2521 ntAPPRIS ALT2 TSL 1 (best) BASIC20.07■□□□□ 0.8
Lsm2O35900 Dennd5a-202ENSMUST00000106722 4862 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
Lsm2O35900 Rmdn2-208ENSMUST00000225357 2118 ntAPPRIS P1 BASIC20.07■□□□□ 0.8
Lsm2O35900 Ppp1r12c-201ENSMUST00000013886 2983 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Lsm2O35900 Larp4b-204ENSMUST00000188939 2658 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
Lsm2O35900 Gm38160-201ENSMUST00000193090 2499 ntBASIC20.06■□□□□ 0.8
Lsm2O35900 BC037034-201ENSMUST00000048421 2490 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Lsm2O35900 Syt6-204ENSMUST00000118563 1843 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
Lsm2O35900 AC061963.1-201ENSMUST00000213180 1765 ntTSL 5 BASIC20.06■□□□□ 0.8
Lsm2O35900 Siah1b-202ENSMUST00000071667 1712 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Lsm2O35900 1810026B05Rik-202ENSMUST00000184554 782 ntTSL 3 BASIC20.05■□□□□ 0.8
Lsm2O35900 4933440N22Rik-202ENSMUST00000204444 1952 ntBASIC20.04■□□□□ 0.8
Lsm2O35900 Gm26711-201ENSMUST00000180866 1833 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
Lsm2O35900 Morn4-201ENSMUST00000051772 1816 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Lsm2O35900 Bend7-202ENSMUST00000115022 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC20.04■□□□□ 0.8
Lsm2O35900 Tsc22d1-204ENSMUST00000110888 4999 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
Lsm2O35900 Marc1-201ENSMUST00000048462 2039 ntAPPRIS P2 TSL 1 (best) BASIC20.03■□□□□ 0.8
Lsm2O35900 Serpinb6a-201ENSMUST00000017188 1504 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
Lsm2O35900 Slc18a3-201ENSMUST00000191501 2413 ntAPPRIS P1 BASIC20.03■□□□□ 0.8
Lsm2O35900 Gm26775-201ENSMUST00000180684 2197 ntTSL 5 BASIC20.03■□□□□ 0.8
Lsm2O35900 Fam60a-202ENSMUST00000081956 2737 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Lsm2O35900 Htra1-201ENSMUST00000006367 2041 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Lsm2O35900 Map2k7-207ENSMUST00000110999 1578 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
Lsm2O35900 Fancf-201ENSMUST00000169357 1691 ntAPPRIS P1 BASIC20.03■□□□□ 0.8
Lsm2O35900 Slc36a1-201ENSMUST00000020499 1950 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Lsm2O35900 Stk32c-201ENSMUST00000016125 2206 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
Lsm2O35900 Rap1a-201ENSMUST00000090678 2407 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
Lsm2O35900 Mpzl1-202ENSMUST00000111435 2285 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
Lsm2O35900 E130307A14Rik-201ENSMUST00000129191 2011 ntTSL 3 BASIC20.02■□□□□ 0.79
Lsm2O35900 Prpsap2-201ENSMUST00000004955 1837 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.79
Lsm2O35900 Txnrd2-214ENSMUST00000205679 1866 ntTSL 5 BASIC20.01■□□□□ 0.79
Lsm2O35900 Znrf2-201ENSMUST00000079869 5886 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Lsm2O35900 Atpaf1-203ENSMUST00000176047 2330 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Lsm2O35900 Snx3-203ENSMUST00000105500 753 ntTSL 5 BASIC20■□□□□ 0.79
Lsm2O35900 Asf1a-201ENSMUST00000020004 2201 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Lsm2O35900 Gsx1-201ENSMUST00000065382 1773 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Lsm2O35900 Ppp5c-201ENSMUST00000003183 2072 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Retrieved 100 of 76,532 protein–RNA pairs in 55.2 ms