Protein–RNA interactions for Protein: O35704

Sptlc1, Serine palmitoyltransferase 1, mousemouse

Predictions only

Length 473 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sptlc1O35704 Dhrs11-201ENSMUST00000047560 1254 ntAPPRIS P1 TSL 1 (best) BASIC24.85■■□□□ 1.57
Sptlc1O35704 Tmem42-201ENSMUST00000084733 1041 ntAPPRIS P1 TSL 1 (best) BASIC24.85■■□□□ 1.57
Sptlc1O35704 Ccna1-202ENSMUST00000197238 1719 ntAPPRIS P1 TSL 5 BASIC24.84■■□□□ 1.57
Sptlc1O35704 Tmem127-202ENSMUST00000174288 842 ntTSL 2 BASIC24.84■■□□□ 1.57
Sptlc1O35704 Jmjd6-201ENSMUST00000047616 1668 ntAPPRIS P1 TSL 1 (best) BASIC24.84■■□□□ 1.57
Sptlc1O35704 Kcnj6-201ENSMUST00000095873 1773 ntTSL 1 (best) BASIC24.83■■□□□ 1.57
Sptlc1O35704 Asf1a-201ENSMUST00000020004 2201 ntAPPRIS P1 TSL 1 (best) BASIC24.82■■□□□ 1.56
Sptlc1O35704 Hopx-203ENSMUST00000120827 1217 ntAPPRIS P1 TSL 1 (best) BASIC24.82■■□□□ 1.56
Sptlc1O35704 Npas1-201ENSMUST00000002053 2091 ntAPPRIS P1 TSL 5 BASIC24.82■■□□□ 1.56
Sptlc1O35704 Cys1-207ENSMUST00000186602 1757 ntAPPRIS P1 TSL 1 (best) BASIC24.81■■□□□ 1.56
Sptlc1O35704 Faim-202ENSMUST00000112911 803 ntAPPRIS ALT1 TSL 2 BASIC24.81■■□□□ 1.56
Sptlc1O35704 Snx21-203ENSMUST00000152471 1243 ntTSL 1 (best) BASIC24.81■■□□□ 1.56
Sptlc1O35704 AC161180.1-201ENSMUST00000223439 933 ntAPPRIS P1 BASIC24.81■■□□□ 1.56
Sptlc1O35704 Efna2-201ENSMUST00000003154 2131 ntAPPRIS P1 TSL 1 (best) BASIC24.81■■□□□ 1.56
Sptlc1O35704 Ntn5-203ENSMUST00000183120 1491 ntTSL 1 (best) BASIC24.81■■□□□ 1.56
Sptlc1O35704 Tmem11-201ENSMUST00000062677 1457 ntAPPRIS P1 TSL 1 (best) BASIC24.8■■□□□ 1.56
Sptlc1O35704 B230377A18Rik-202ENSMUST00000192921 1364 ntBASIC24.8■■□□□ 1.56
Sptlc1O35704 Runx2-211ENSMUST00000162629 1607 ntAPPRIS ALT2 TSL 5 BASIC24.79■■□□□ 1.56
Sptlc1O35704 St7-205ENSMUST00000081635 2115 ntTSL 1 (best) BASIC24.79■■□□□ 1.56
Sptlc1O35704 Gm43592-201ENSMUST00000196922 1165 ntBASIC24.79■■□□□ 1.56
Sptlc1O35704 2310061I04Rik-202ENSMUST00000146451 2081 ntTSL 1 (best) BASIC24.79■■□□□ 1.56
Sptlc1O35704 Eif5a-208ENSMUST00000108611 1353 ntAPPRIS P1 TSL 1 (best) BASIC24.79■■□□□ 1.56
Sptlc1O35704 Dexi-201ENSMUST00000038281 1389 ntAPPRIS P1 TSL 1 (best) BASIC24.79■■□□□ 1.56
Sptlc1O35704 Tmem106c-201ENSMUST00000064200 1635 ntAPPRIS P1 TSL 1 (best) BASIC24.79■■□□□ 1.56
Sptlc1O35704 Gm12905-201ENSMUST00000153814 658 ntTSL 2 BASIC24.78■■□□□ 1.56
Sptlc1O35704 Gm29735-201ENSMUST00000209599 660 ntAPPRIS P1 BASIC24.78■■□□□ 1.56
Sptlc1O35704 AC117769.4-201ENSMUST00000225679 685 ntBASIC24.78■■□□□ 1.56
Sptlc1O35704 Coprs-201ENSMUST00000033839 793 ntAPPRIS P1 TSL 1 (best) BASIC24.78■■□□□ 1.56
Sptlc1O35704 Lsm4-201ENSMUST00000034311 925 ntAPPRIS P1 TSL 1 (best) BASIC24.78■■□□□ 1.56
Sptlc1O35704 AC122428.3-201ENSMUST00000215551 2290 ntBASIC24.77■■□□□ 1.56
Sptlc1O35704 Ppp1r14c-202ENSMUST00000217573 2013 ntTSL 1 (best) BASIC24.77■■□□□ 1.56
Sptlc1O35704 Cnnm3-202ENSMUST00000097776 5292 ntAPPRIS ALT2 TSL 1 (best) BASIC24.76■■□□□ 1.55
Sptlc1O35704 Pxmp2-201ENSMUST00000031472 1041 ntAPPRIS P1 TSL 1 (best) BASIC24.76■■□□□ 1.55
Sptlc1O35704 Paqr3-202ENSMUST00000112968 1875 ntTSL 1 (best) BASIC24.76■■□□□ 1.55
Sptlc1O35704 AC166358.2-201ENSMUST00000223403 734 ntTSL 5 BASIC24.75■■□□□ 1.55
Sptlc1O35704 Dusp2-201ENSMUST00000028846 1617 ntAPPRIS P1 TSL 1 (best) BASIC24.75■■□□□ 1.55
Sptlc1O35704 Adra1d-201ENSMUST00000103184 1899 ntAPPRIS P1 TSL 1 (best) BASIC24.75■■□□□ 1.55
Sptlc1O35704 Siah1a-201ENSMUST00000045296 1968 ntAPPRIS P1 TSL 1 (best) BASIC24.74■■□□□ 1.55
Sptlc1O35704 Gm7544-201ENSMUST00000222426 828 ntAPPRIS P1 BASIC24.74■■□□□ 1.55
Sptlc1O35704 Rcan1-202ENSMUST00000060005 2324 ntTSL 1 (best) BASIC24.74■■□□□ 1.55
Sptlc1O35704 Terf2-203ENSMUST00000116425 2471 ntTSL 1 (best) BASIC24.74■■□□□ 1.55
Sptlc1O35704 Spryd7-202ENSMUST00000100496 1459 ntTSL 1 (best) BASIC24.73■■□□□ 1.55
Sptlc1O35704 Dynll1-202ENSMUST00000112090 729 ntAPPRIS P1 TSL 2 BASIC24.73■■□□□ 1.55
Sptlc1O35704 Hras-202ENSMUST00000097957 1199 ntAPPRIS P1 TSL 2 BASIC24.73■■□□□ 1.55
Sptlc1O35704 Pdgfa-204ENSMUST00000110897 1287 ntAPPRIS P1 TSL 5 BASIC24.72■■□□□ 1.55
Sptlc1O35704 Cpe-201ENSMUST00000048967 2117 ntAPPRIS P1 TSL 1 (best) BASIC24.72■■□□□ 1.55
Sptlc1O35704 Kif1c-205ENSMUST00000152618 1943 ntTSL 1 (best) BASIC24.72■■□□□ 1.55
Sptlc1O35704 Fgf16-201ENSMUST00000033581 1645 ntAPPRIS P1 TSL 1 (best) BASIC24.72■■□□□ 1.55
Sptlc1O35704 Cited2-201ENSMUST00000038107 1979 ntAPPRIS P1 TSL 1 (best) BASIC24.71■■□□□ 1.55
Sptlc1O35704 Clptm1l-201ENSMUST00000022102 2340 ntAPPRIS P1 TSL 1 (best) BASIC24.71■■□□□ 1.55
Sptlc1O35704 Gm13238-201ENSMUST00000117655 780 ntBASIC24.71■■□□□ 1.55
Sptlc1O35704 Tmem235-201ENSMUST00000093905 1820 ntAPPRIS P1 TSL 5 BASIC24.7■■□□□ 1.55
Sptlc1O35704 Rcor2-201ENSMUST00000066646 2801 ntAPPRIS P1 TSL 1 (best) BASIC24.7■■□□□ 1.54
Sptlc1O35704 2810002D19Rik-201ENSMUST00000152313 2040 ntTSL 1 (best) BASIC24.7■■□□□ 1.54
Sptlc1O35704 Sin3b-202ENSMUST00000109950 1024 ntTSL 1 (best) BASIC24.7■■□□□ 1.54
Sptlc1O35704 Mpnd-208ENSMUST00000159996 1444 ntAPPRIS ALT2 TSL 5 BASIC24.69■■□□□ 1.54
Sptlc1O35704 Ube2k-206ENSMUST00000201984 1449 ntTSL 3 BASIC24.69■■□□□ 1.54
Sptlc1O35704 Mef2a-201ENSMUST00000032776 2476 ntAPPRIS P1 TSL 1 (best) BASIC24.69■■□□□ 1.54
Sptlc1O35704 Olfm2-203ENSMUST00000215999 1895 ntAPPRIS ALT2 TSL 3 BASIC24.68■■□□□ 1.54
Sptlc1O35704 Jdp2-201ENSMUST00000050687 1643 ntAPPRIS P1 TSL 1 (best) BASIC24.68■■□□□ 1.54
Sptlc1O35704 Dapk2-201ENSMUST00000034944 1772 ntAPPRIS P1 TSL 1 (best) BASIC24.68■■□□□ 1.54
Sptlc1O35704 Sox17-202ENSMUST00000116652 1512 ntAPPRIS P1 TSL 1 (best) BASIC24.68■■□□□ 1.54
Sptlc1O35704 Gm15546-201ENSMUST00000122095 826 ntBASIC24.68■■□□□ 1.54
Sptlc1O35704 Nrsn1-201ENSMUST00000057866 2222 ntAPPRIS P1 TSL 1 (best) BASIC24.67■■□□□ 1.54
Sptlc1O35704 Gsc2-201ENSMUST00000012279 1172 ntAPPRIS P1 TSL 1 (best) BASIC24.66■■□□□ 1.54
Sptlc1O35704 Arhgap39-204ENSMUST00000176219 542 ntTSL 5 BASIC24.66■■□□□ 1.54
Sptlc1O35704 Gm6217-201ENSMUST00000222182 829 ntAPPRIS P1 BASIC24.66■■□□□ 1.54
Sptlc1O35704 Nsd1-203ENSMUST00000224156 1149 ntBASIC24.66■■□□□ 1.54
Sptlc1O35704 Slc16a11-207ENSMUST00000136328 1403 ntTSL 5 BASIC24.66■■□□□ 1.54
Sptlc1O35704 Arhgap9-203ENSMUST00000219026 1946 ntAPPRIS P2 TSL 1 (best) BASIC24.66■■□□□ 1.54
Sptlc1O35704 Cckbr-202ENSMUST00000181339 1326 ntTSL 1 (best) BASIC24.65■■□□□ 1.54
Sptlc1O35704 Gm38287-201ENSMUST00000195193 2051 ntTSL 3 BASIC24.65■■□□□ 1.54
Sptlc1O35704 Srd5a3-201ENSMUST00000031143 1747 ntAPPRIS P2 TSL 1 (best) BASIC24.65■■□□□ 1.54
Sptlc1O35704 A430027H14Rik-201ENSMUST00000191809 1467 ntBASIC24.64■■□□□ 1.54
Sptlc1O35704 Fam220a-201ENSMUST00000067145 2198 ntAPPRIS P1 TSL 1 (best) BASIC24.64■■□□□ 1.54
Sptlc1O35704 Rasgef1c-203ENSMUST00000093142 2216 ntAPPRIS P3 TSL 1 (best) BASIC24.64■■□□□ 1.54
Sptlc1O35704 March5-202ENSMUST00000112391 1293 ntTSL 1 (best) BASIC24.64■■□□□ 1.54
Sptlc1O35704 Gng12-203ENSMUST00000114224 680 ntAPPRIS P1 TSL 3 BASIC24.64■■□□□ 1.54
Sptlc1O35704 Gng12-206ENSMUST00000114227 1125 ntAPPRIS P1 TSL 1 (best) BASIC24.64■■□□□ 1.54
Sptlc1O35704 Gm5522-201ENSMUST00000189483 1242 ntBASIC24.64■■□□□ 1.54
Sptlc1O35704 Phf2os1-201ENSMUST00000123212 498 ntTSL 3 BASIC24.63■■□□□ 1.53
Sptlc1O35704 Rragc-201ENSMUST00000030399 2593 ntAPPRIS P1 TSL 1 (best) BASIC24.63■■□□□ 1.53
Sptlc1O35704 AC164433.2-201ENSMUST00000226346 1701 ntBASIC24.63■■□□□ 1.53
Sptlc1O35704 Cldnd1-204ENSMUST00000162057 1540 ntAPPRIS P1 TSL 5 BASIC24.62■■□□□ 1.53
Sptlc1O35704 Slc44a1-203ENSMUST00000107646 1974 ntTSL 5 BASIC24.62■■□□□ 1.53
Sptlc1O35704 Tmx4-202ENSMUST00000110119 596 ntTSL 2 BASIC24.62■■□□□ 1.53
Sptlc1O35704 Ak2-201ENSMUST00000030583 986 ntAPPRIS P4 TSL 1 (best) BASIC24.62■■□□□ 1.53
Sptlc1O35704 Rab40c-209ENSMUST00000179998 2456 ntAPPRIS P1 TSL 5 BASIC24.62■■□□□ 1.53
Sptlc1O35704 Adat3-204ENSMUST00000038411 1411 ntAPPRIS P1 TSL 2 BASIC24.61■■□□□ 1.53
Sptlc1O35704 Fus-201ENSMUST00000077609 1831 ntAPPRIS ALT2 TSL 1 (best) BASIC24.61■■□□□ 1.53
Sptlc1O35704 Susd3-203ENSMUST00000119721 1249 ntAPPRIS ALT2 TSL 1 (best) BASIC24.61■■□□□ 1.53
Sptlc1O35704 Gm43566-201ENSMUST00000196851 808 ntBASIC24.61■■□□□ 1.53
Sptlc1O35704 H2afj-202ENSMUST00000203982 577 ntAPPRIS ALT1 TSL 3 BASIC24.61■■□□□ 1.53
Sptlc1O35704 Trappc6b-207ENSMUST00000218686 785 ntTSL 3 BASIC24.61■■□□□ 1.53
Sptlc1O35704 Csrp1-201ENSMUST00000027677 1823 ntAPPRIS P1 TSL 1 (best) BASIC24.61■■□□□ 1.53
Sptlc1O35704 Csrp1-202ENSMUST00000097561 1828 ntAPPRIS P1 TSL 1 (best) BASIC24.61■■□□□ 1.53
Sptlc1O35704 Sox3-201ENSMUST00000135107 2065 ntAPPRIS P1 BASIC24.6■■□□□ 1.53
Sptlc1O35704 Vax1-201ENSMUST00000172821 1044 ntAPPRIS P1 TSL 1 (best) BASIC24.6■■□□□ 1.53
Sptlc1O35704 Ppia-202ENSMUST00000132846 1170 ntAPPRIS P1 TSL 1 (best) BASIC24.59■■□□□ 1.53
Sptlc1O35704 Gm28417-202ENSMUST00000185881 538 ntTSL 3 BASIC24.59■■□□□ 1.53
Retrieved 100 of 76,532 protein–RNA pairs in 114.6 ms