Protein–RNA interactions for Protein: O35604

Npc1, Niemann-Pick C1 protein, mousemouse

Predictions only

Length 1,277 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Npc1O35604 Vamp4-206ENSMUST00000150040 901 ntAPPRIS P1 TSL 5 BASIC21.93■■□□□ 1.1
Npc1O35604 Eid1-201ENSMUST00000164756 1691 ntAPPRIS P1 BASIC21.93■■□□□ 1.1
Npc1O35604 Pdcd4-203ENSMUST00000165617 1806 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
Npc1O35604 Tmem70-203ENSMUST00000177501 1636 ntAPPRIS P3 TSL 1 (best) BASIC21.93■■□□□ 1.1
Npc1O35604 Csrp1-201ENSMUST00000027677 1823 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
Npc1O35604 Tmpo-203ENSMUST00000092219 1854 ntTSL 1 (best) BASIC21.93■■□□□ 1.1
Npc1O35604 Csrp1-202ENSMUST00000097561 1828 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
Npc1O35604 Sh3d21-202ENSMUST00000097891 2384 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
Npc1O35604 Smox-201ENSMUST00000028806 2270 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
Npc1O35604 Ybx3-202ENSMUST00000087865 1684 ntAPPRIS ALT2 TSL 1 (best) BASIC21.92■■□□□ 1.1
Npc1O35604 Tceal6-201ENSMUST00000033783 1114 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
Npc1O35604 Id3-201ENSMUST00000008016 1278 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
Npc1O35604 St6galnac6-203ENSMUST00000095044 2394 ntAPPRIS P3 TSL 1 (best) BASIC21.92■■□□□ 1.1
Npc1O35604 Il17rd-202ENSMUST00000223942 2186 ntBASIC21.91■■□□□ 1.1
Npc1O35604 Ybx2-205ENSMUST00000149194 1235 ntTSL 5 BASIC21.91■■□□□ 1.1
Npc1O35604 Pdlim4-201ENSMUST00000018755 1182 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
Npc1O35604 Gm45051-201ENSMUST00000206838 963 ntTSL 1 (best) BASIC21.91■■□□□ 1.1
Npc1O35604 A830010M20Rik-207ENSMUST00000162298 1408 ntTSL 5 BASIC21.9■■□□□ 1.1
Npc1O35604 Zfp703-201ENSMUST00000127097 587 ntTSL 2 BASIC21.9■■□□□ 1.1
Npc1O35604 Wbp1-208ENSMUST00000151393 837 ntTSL 3 BASIC21.9■■□□□ 1.1
Npc1O35604 Cap2-205ENSMUST00000225824 1634 ntBASIC21.9■■□□□ 1.1
Npc1O35604 Hoxb3-202ENSMUST00000093944 3190 ntAPPRIS P1 TSL 5 BASIC21.9■■□□□ 1.1
Npc1O35604 Nsmce4a-202ENSMUST00000160289 1435 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.1
Npc1O35604 Osbpl10-207ENSMUST00000183104 2477 ntAPPRIS P1 TSL 5 BASIC21.89■■□□□ 1.09
Npc1O35604 Qdpr-201ENSMUST00000015950 1380 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
Npc1O35604 Acvr2b-201ENSMUST00000035093 1729 ntTSL 5 BASIC21.88■■□□□ 1.09
Npc1O35604 Fam149b-203ENSMUST00000090499 2370 ntAPPRIS P4 TSL 1 (best) BASIC21.88■■□□□ 1.09
Npc1O35604 Plvap-201ENSMUST00000048452 1987 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
Npc1O35604 Eif4e2-204ENSMUST00000113231 1119 ntTSL 1 (best) BASIC21.87■■□□□ 1.09
Npc1O35604 Cadm1-202ENSMUST00000085909 2126 ntTSL 1 (best) BASIC21.87■■□□□ 1.09
Npc1O35604 Qk-202ENSMUST00000097414 4658 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
Npc1O35604 Ctage5-218ENSMUST00000177162 2728 ntTSL 5 BASIC21.86■■□□□ 1.09
Npc1O35604 Cox11-201ENSMUST00000020851 1224 ntAPPRIS P2 TSL 1 (best) BASIC21.86■■□□□ 1.09
Npc1O35604 Hoxc8-201ENSMUST00000001703 1868 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
Npc1O35604 Dusp7-201ENSMUST00000172306 3213 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
Npc1O35604 Kctd2-201ENSMUST00000103035 1764 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
Npc1O35604 Zdhhc2-205ENSMUST00000167766 1759 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
Npc1O35604 Spsb3-205ENSMUST00000120943 1949 ntAPPRIS ALT2 TSL 1 (best) BASIC21.85■■□□□ 1.09
Npc1O35604 Znrf2-201ENSMUST00000079869 5886 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
Npc1O35604 Fam204a-201ENSMUST00000065286 2035 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
Npc1O35604 Glrx3-201ENSMUST00000064404 1685 ntAPPRIS P2 TSL 1 (best) BASIC21.84■■□□□ 1.09
Npc1O35604 Gm8098-201ENSMUST00000146985 1499 ntTSL 1 (best) BASIC21.83■■□□□ 1.09
Npc1O35604 Gli3-204ENSMUST00000141194 466 ntTSL 2 BASIC21.83■■□□□ 1.09
Npc1O35604 AC153366.1-201ENSMUST00000218132 1056 ntTSL 1 (best) BASIC21.83■■□□□ 1.09
Npc1O35604 Mapk1-201ENSMUST00000023462 2390 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.08
Npc1O35604 Smurf1-203ENSMUST00000110677 5420 ntTSL 5 BASIC21.82■■□□□ 1.08
Npc1O35604 Srsf2-206ENSMUST00000190993 1326 ntAPPRIS P1 TSL 2 BASIC21.82■■□□□ 1.08
Npc1O35604 Rps2-ps13-201ENSMUST00000117295 882 ntBASIC21.82■■□□□ 1.08
Npc1O35604 Gm12366-201ENSMUST00000121722 873 ntBASIC21.82■■□□□ 1.08
Npc1O35604 Rps2-206ENSMUST00000146867 962 ntTSL 5 BASIC21.82■■□□□ 1.08
Npc1O35604 Kiss1-202ENSMUST00000178033 496 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
Npc1O35604 Rps2-ps10-201ENSMUST00000076842 879 ntBASIC21.82■■□□□ 1.08
Npc1O35604 Gm5786-201ENSMUST00000085368 882 ntBASIC21.82■■□□□ 1.08
Npc1O35604 Ran-202ENSMUST00000111343 2423 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
Npc1O35604 Pou4f1-201ENSMUST00000053016 4445 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
Npc1O35604 Gm45713-201ENSMUST00000209467 1477 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
Npc1O35604 Fam220a-201ENSMUST00000067145 2198 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
Npc1O35604 E130309D02Rik-201ENSMUST00000046418 2208 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
Npc1O35604 Gm13256-201ENSMUST00000131297 520 ntTSL 3 BASIC21.79■■□□□ 1.08
Npc1O35604 Mpped1-208ENSMUST00000163723 1064 ntTSL 5 BASIC21.79■■□□□ 1.08
Npc1O35604 Hoxb3-201ENSMUST00000055334 1890 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
Npc1O35604 Prr5-201ENSMUST00000065499 1830 ntAPPRIS P3 TSL 1 (best) BASIC21.78■■□□□ 1.08
Npc1O35604 Ppp1ca-201ENSMUST00000046094 1379 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
Npc1O35604 Inafm1-201ENSMUST00000169612 1605 ntAPPRIS P1 BASIC21.78■■□□□ 1.08
Npc1O35604 1700020L24Rik-201ENSMUST00000037378 949 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
Npc1O35604 Hscb-201ENSMUST00000056937 804 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
Npc1O35604 Smagp-201ENSMUST00000066068 1132 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
Npc1O35604 Hecw2-202ENSMUST00000097741 1132 ntTSL 1 (best) BASIC21.78■■□□□ 1.08
Npc1O35604 Elf2-203ENSMUST00000108051 2514 ntTSL 1 (best) BASIC21.78■■□□□ 1.08
Npc1O35604 Ube2k-203ENSMUST00000201266 1449 ntTSL 5 BASIC21.78■■□□□ 1.08
Npc1O35604 Fra10ac1-201ENSMUST00000067167 1402 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
Npc1O35604 Kcnk2-205ENSMUST00000192723 1642 ntAPPRIS ALT1 TSL 1 (best) BASIC21.77■■□□□ 1.08
Npc1O35604 Fam126a-206ENSMUST00000197617 2288 ntTSL 5 BASIC21.77■■□□□ 1.08
Npc1O35604 Mxra7-201ENSMUST00000021170 2063 ntAPPRIS P3 TSL 1 (best) BASIC21.76■■□□□ 1.07
Npc1O35604 Tmem260-210ENSMUST00000227440 2222 ntAPPRIS ALT2 BASIC21.76■■□□□ 1.07
Npc1O35604 Gm16286-202ENSMUST00000125127 1683 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
Npc1O35604 Cutc-201ENSMUST00000026199 1298 ntTSL 1 (best) BASIC21.76■■□□□ 1.07
Npc1O35604 A830010M20Rik-202ENSMUST00000094541 1134 ntTSL 5 BASIC21.75■■□□□ 1.07
Npc1O35604 Rnaset2a-201ENSMUST00000097420 1259 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
Npc1O35604 Ethe1-201ENSMUST00000077191 1484 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
Npc1O35604 Kcnq5-206ENSMUST00000173404 2775 ntAPPRIS ALT2 TSL 5 BASIC21.75■■□□□ 1.07
Npc1O35604 Kif1c-205ENSMUST00000152618 1943 ntTSL 1 (best) BASIC21.74■■□□□ 1.07
Npc1O35604 Cadm1-206ENSMUST00000143026 1643 ntTSL 5 BASIC21.74■■□□□ 1.07
Npc1O35604 Psmb8-201ENSMUST00000025196 1628 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
Npc1O35604 Gm14523-201ENSMUST00000117260 558 ntBASIC21.74■■□□□ 1.07
Npc1O35604 Gm44428-201ENSMUST00000204474 874 ntBASIC21.74■■□□□ 1.07
Npc1O35604 Ttc9-201ENSMUST00000036116 2042 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
Npc1O35604 Hnrnpk-210ENSMUST00000176558 1053 ntTSL 2 BASIC21.73■■□□□ 1.07
Npc1O35604 Kansl1l-202ENSMUST00000113987 2342 ntTSL 1 (best) BASIC21.73■■□□□ 1.07
Npc1O35604 Ip6k1-208ENSMUST00000176854 2251 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
Npc1O35604 Brwd1-203ENSMUST00000113827 2382 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
Npc1O35604 4933429H19Rik-202ENSMUST00000187361 995 ntBASIC21.72■■□□□ 1.07
Npc1O35604 Gm39157-201ENSMUST00000212322 1180 ntTSL 5 BASIC21.72■■□□□ 1.07
Npc1O35604 Dusp22-201ENSMUST00000091672 1161 ntAPPRIS ALT2 TSL 1 (best) BASIC21.72■■□□□ 1.07
Npc1O35604 Prph-202ENSMUST00000047104 1865 ntAPPRIS P3 TSL 1 (best) BASIC21.72■■□□□ 1.07
Npc1O35604 Evl-201ENSMUST00000021689 2180 ntAPPRIS ALT2 TSL 1 (best) BASIC21.72■■□□□ 1.07
Npc1O35604 Dbndd2-202ENSMUST00000069385 1658 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
Npc1O35604 Slc16a11-211ENSMUST00000171032 1754 ntAPPRIS P1 TSL 5 BASIC21.71■■□□□ 1.07
Npc1O35604 Ctnnd2-201ENSMUST00000081728 5944 ntAPPRIS P2 TSL 1 (best) BASIC21.71■■□□□ 1.07
Npc1O35604 Klhl15-202ENSMUST00000113908 1235 ntTSL 1 (best) BASIC21.71■■□□□ 1.07
Retrieved 100 of 76,532 protein–RNA pairs in 25.8 ms