Protein–RNA interactions for Protein: A0A0A6YW38

Gm28870, Predicted gene 28870, mousemouse

Predictions only

Length 222 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gm28870A0A0A6YW38 Hoxb3-202ENSMUST00000093944 3190 ntAPPRIS P1 TSL 5 BASIC19.36■□□□□ 0.69
Gm28870A0A0A6YW38 Plvap-201ENSMUST00000048452 1987 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Gm28870A0A0A6YW38 Zdhhc2-205ENSMUST00000167766 1759 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Gm28870A0A0A6YW38 Tmpo-203ENSMUST00000092219 1854 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
Gm28870A0A0A6YW38 Slc9a2-201ENSMUST00000027231 5019 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Gm28870A0A0A6YW38 Etfa-201ENSMUST00000034866 1392 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Gm28870A0A0A6YW38 Psip1-203ENSMUST00000107215 1898 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
Gm28870A0A0A6YW38 Serpinb6a-201ENSMUST00000017188 1504 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
Gm28870A0A0A6YW38 Ubtf-213ENSMUST00000178839 4580 ntAPPRIS ALT2 TSL 1 (best) BASIC19.34■□□□□ 0.69
Gm28870A0A0A6YW38 Cadm1-202ENSMUST00000085909 2126 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
Gm28870A0A0A6YW38 Syt7-203ENSMUST00000169121 6834 ntTSL 5 BASIC19.33■□□□□ 0.69
Gm28870A0A0A6YW38 Soga1-201ENSMUST00000069098 7864 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
Gm28870A0A0A6YW38 Fam204a-201ENSMUST00000065286 2035 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
Gm28870A0A0A6YW38 P3h3-201ENSMUST00000023958 2850 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Gm28870A0A0A6YW38 C2cd4d-201ENSMUST00000169433 1321 ntAPPRIS P1 TSL 3 BASIC19.32■□□□□ 0.68
Gm28870A0A0A6YW38 Nol4l-201ENSMUST00000035346 6399 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Gm28870A0A0A6YW38 Ppp3ca-202ENSMUST00000070198 4758 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
Gm28870A0A0A6YW38 Fam149b-203ENSMUST00000090499 2370 ntAPPRIS P4 TSL 1 (best) BASIC19.32■□□□□ 0.68
Gm28870A0A0A6YW38 Spsb3-205ENSMUST00000120943 1949 ntAPPRIS ALT2 TSL 1 (best) BASIC19.31■□□□□ 0.68
Gm28870A0A0A6YW38 Ltk-201ENSMUST00000028759 3080 ntAPPRIS P4 TSL 1 (best) BASIC19.31■□□□□ 0.68
Gm28870A0A0A6YW38 Suds3-201ENSMUST00000086471 2425 ntAPPRIS P3 TSL 1 (best) BASIC19.31■□□□□ 0.68
Gm28870A0A0A6YW38 Esrra-201ENSMUST00000025906 2242 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Gm28870A0A0A6YW38 Rundc3a-203ENSMUST00000107103 1822 ntTSL 5 BASIC19.31■□□□□ 0.68
Gm28870A0A0A6YW38 Tmem55b-201ENSMUST00000049312 1594 ntAPPRIS ALT1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Gm28870A0A0A6YW38 1700026D11Rik-201ENSMUST00000126910 2033 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
Gm28870A0A0A6YW38 Il17rd-202ENSMUST00000223942 2186 ntBASIC19.3■□□□□ 0.68
Gm28870A0A0A6YW38 Pdcd4-201ENSMUST00000025931 2330 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Gm28870A0A0A6YW38 Stard3nl-201ENSMUST00000039694 1327 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Gm28870A0A0A6YW38 Zc3hav1l-201ENSMUST00000058524 6536 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Gm28870A0A0A6YW38 Pdgfb-201ENSMUST00000000500 2918 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Gm28870A0A0A6YW38 Efhd2-201ENSMUST00000036854 2381 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Gm28870A0A0A6YW38 Habp4-201ENSMUST00000021929 2564 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Gm28870A0A0A6YW38 Vps37b-201ENSMUST00000040967 2522 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Gm28870A0A0A6YW38 Dvl1-208ENSMUST00000168552 2776 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Gm28870A0A0A6YW38 Ubp1-204ENSMUST00000214095 2320 ntAPPRIS ALT1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Gm28870A0A0A6YW38 Znrf1-204ENSMUST00000171182 5466 ntTSL 3 BASIC19.29■□□□□ 0.68
Gm28870A0A0A6YW38 Crip2-201ENSMUST00000084882 1439 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Gm28870A0A0A6YW38 Gm17641-201ENSMUST00000166328 2350 ntBASIC19.29■□□□□ 0.68
Gm28870A0A0A6YW38 Kif1c-205ENSMUST00000152618 1943 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
Gm28870A0A0A6YW38 Kcnc3-203ENSMUST00000207493 2731 ntAPPRIS ALT2 TSL 5 BASIC19.29■□□□□ 0.68
Gm28870A0A0A6YW38 Ttc9-201ENSMUST00000036116 2042 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Gm28870A0A0A6YW38 Bckdhb-206ENSMUST00000190637 1477 ntAPPRIS ALT2 TSL 1 (best) BASIC19.28■□□□□ 0.68
Gm28870A0A0A6YW38 Ccdc136-206ENSMUST00000145310 1703 ntAPPRIS ALT2 TSL 5 BASIC19.28■□□□□ 0.68
Gm28870A0A0A6YW38 Anxa5-201ENSMUST00000029266 1731 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Gm28870A0A0A6YW38 Ccdc122-201ENSMUST00000048208 1721 ntAPPRIS P3 TSL 1 (best) BASIC19.28■□□□□ 0.68
Gm28870A0A0A6YW38 Dlg3-202ENSMUST00000087984 4956 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Gm28870A0A0A6YW38 Gltp-203ENSMUST00000112214 944 ntTSL 3 BASIC19.28■□□□□ 0.68
Gm28870A0A0A6YW38 Slc16a11-211ENSMUST00000171032 1754 ntAPPRIS P1 TSL 5 BASIC19.28■□□□□ 0.68
Gm28870A0A0A6YW38 H1f0-201ENSMUST00000180086 2287 ntAPPRIS P1 BASIC19.28■□□□□ 0.68
Gm28870A0A0A6YW38 Smox-201ENSMUST00000028806 2270 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Gm28870A0A0A6YW38 Prph-202ENSMUST00000047104 1865 ntAPPRIS P3 TSL 1 (best) BASIC19.28■□□□□ 0.68
Gm28870A0A0A6YW38 Rps6ka3-201ENSMUST00000033671 7244 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Gm28870A0A0A6YW38 Rnf19b-206ENSMUST00000168461 2532 ntAPPRIS P2 TSL 5 BASIC19.27■□□□□ 0.68
Gm28870A0A0A6YW38 St6galnac6-203ENSMUST00000095044 2394 ntAPPRIS P3 TSL 1 (best) BASIC19.27■□□□□ 0.68
Gm28870A0A0A6YW38 Phf14-203ENSMUST00000115511 3336 ntAPPRIS P1 TSL 5 BASIC19.27■□□□□ 0.68
Gm28870A0A0A6YW38 Dtnbp1-201ENSMUST00000072329 1362 ntAPPRIS P2 TSL 1 (best) BASIC19.27■□□□□ 0.68
Gm28870A0A0A6YW38 Prr5-201ENSMUST00000065499 1830 ntAPPRIS P3 TSL 1 (best) BASIC19.27■□□□□ 0.68
Gm28870A0A0A6YW38 Nudt9-201ENSMUST00000031250 1488 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.67
Gm28870A0A0A6YW38 Sh3d21-202ENSMUST00000097891 2384 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Gm28870A0A0A6YW38 Gls-202ENSMUST00000114510 5596 ntAPPRIS ALT2 TSL 1 (best) BASIC19.26■□□□□ 0.67
Gm28870A0A0A6YW38 Chsy1-201ENSMUST00000036372 4176 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Gm28870A0A0A6YW38 Ran-202ENSMUST00000111343 2423 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Gm28870A0A0A6YW38 Lor-201ENSMUST00000058150 1779 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Gm28870A0A0A6YW38 Ctage5-218ENSMUST00000177162 2728 ntTSL 5 BASIC19.25■□□□□ 0.67
Gm28870A0A0A6YW38 Fam126a-206ENSMUST00000197617 2288 ntTSL 5 BASIC19.25■□□□□ 0.67
Gm28870A0A0A6YW38 Mxra7-201ENSMUST00000021170 2063 ntAPPRIS P3 TSL 1 (best) BASIC19.25■□□□□ 0.67
Gm28870A0A0A6YW38 Gm10499-202ENSMUST00000174778 1698 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
Gm28870A0A0A6YW38 Gemin7-202ENSMUST00000117222 1023 ntAPPRIS P1 TSL 2 BASIC19.25■□□□□ 0.67
Gm28870A0A0A6YW38 Dtx4-201ENSMUST00000045521 5765 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Gm28870A0A0A6YW38 Pafah1b1-201ENSMUST00000021091 5803 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Gm28870A0A0A6YW38 Arglu1-201ENSMUST00000048545 3197 ntAPPRIS P1 TSL 2 BASIC19.25■□□□□ 0.67
Gm28870A0A0A6YW38 Fam92a-202ENSMUST00000108285 1639 ntAPPRIS P3 TSL 5 BASIC19.25■□□□□ 0.67
Gm28870A0A0A6YW38 Tcte3-201ENSMUST00000040746 788 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Gm28870A0A0A6YW38 Tcte3-202ENSMUST00000097398 632 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
Gm28870A0A0A6YW38 Fam20b-201ENSMUST00000086153 4414 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Gm28870A0A0A6YW38 Baz1a-201ENSMUST00000038926 6188 ntAPPRIS ALT2 TSL 5 BASIC19.24■□□□□ 0.67
Gm28870A0A0A6YW38 Mxra7-202ENSMUST00000047715 757 ntAPPRIS ALT2 TSL 1 (best) BASIC19.23■□□□□ 0.67
Gm28870A0A0A6YW38 Map2k7-207ENSMUST00000110999 1578 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
Gm28870A0A0A6YW38 Larp1-203ENSMUST00000178636 6617 ntAPPRIS P2 TSL 5 BASIC19.23■□□□□ 0.67
Gm28870A0A0A6YW38 Rbmxl2-201ENSMUST00000098135 1472 ntAPPRIS P1 BASIC19.22■□□□□ 0.67
Gm28870A0A0A6YW38 A230005M16Rik-201ENSMUST00000137661 1605 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
Gm28870A0A0A6YW38 Cops6-202ENSMUST00000110951 1098 ntAPPRIS ALT2 TSL 1 (best) BASIC19.22■□□□□ 0.67
Gm28870A0A0A6YW38 C1qtnf5-201ENSMUST00000114815 1215 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Gm28870A0A0A6YW38 Lgr4-201ENSMUST00000046548 5060 ntAPPRIS P1 TSL 2 BASIC19.22■□□□□ 0.67
Gm28870A0A0A6YW38 Pm20d2-202ENSMUST00000119167 1339 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
Gm28870A0A0A6YW38 Ccdc9-201ENSMUST00000041010 2379 ntAPPRIS P3 TSL 1 (best) BASIC19.21■□□□□ 0.67
Gm28870A0A0A6YW38 Serpinb6a-206ENSMUST00000167163 1654 ntAPPRIS P1 TSL 5 BASIC19.21■□□□□ 0.67
Gm28870A0A0A6YW38 Dbndd2-202ENSMUST00000069385 1658 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Gm28870A0A0A6YW38 Traf3-203ENSMUST00000117269 6972 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
Gm28870A0A0A6YW38 Scn1b-201ENSMUST00000098548 1573 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Gm28870A0A0A6YW38 Fance-203ENSMUST00000114803 1980 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
Gm28870A0A0A6YW38 Gm14121-201ENSMUST00000121441 1380 ntBASIC19.2■□□□□ 0.66
Gm28870A0A0A6YW38 Sirt1-203ENSMUST00000120239 4430 ntAPPRIS P3 TSL 5 BASIC19.2■□□□□ 0.66
Gm28870A0A0A6YW38 Endog-201ENSMUST00000015481 1063 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Gm28870A0A0A6YW38 Pgbd5-204ENSMUST00000140012 3222 ntAPPRIS ALT2 TSL 5 BASIC19.2■□□□□ 0.66
Gm28870A0A0A6YW38 Ank1-207ENSMUST00000118733 8201 ntAPPRIS ALT2 TSL 1 (best) BASIC19.2■□□□□ 0.66
Gm28870A0A0A6YW38 Suz12-206ENSMUST00000163272 4303 ntAPPRIS ALT2 TSL 5 BASIC19.19■□□□□ 0.66
Gm28870A0A0A6YW38 Ptpn4-203ENSMUST00000163435 2365 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
Gm28870A0A0A6YW38 Rapgef1-203ENSMUST00000102872 6402 ntAPPRIS P3 TSL 1 (best) BASIC19.19■□□□□ 0.66
Gm28870A0A0A6YW38 Uba52-205ENSMUST00000129909 705 ntAPPRIS P1 TSL 2 BASIC19.19■□□□□ 0.66
Retrieved 100 of 76,532 protein–RNA pairs in 80.7 ms