Protein–RNA interactions for Protein: A0A075B650

Trav15-2-dv6-2, T cell receptor alpha variable 15-2-DV6-2 (Fragment), mousemouse

Predictions only

Length 123 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav15-2-dv6-2A0A075B650 Arpc2-203ENSMUST00000113820 1439 ntAPPRIS P1 TSL 1 (best) BASIC18,42■□□□□ 0,54
Trav15-2-dv6-2A0A075B650 Mlycd-201ENSMUST00000098367 2128 ntAPPRIS P1 TSL 1 (best) BASIC18,42■□□□□ 0,54
Trav15-2-dv6-2A0A075B650 Eml4-202ENSMUST00000096766 5445 ntAPPRIS ALT2 TSL 1 (best) BASIC18,42■□□□□ 0,54
Trav15-2-dv6-2A0A075B650 Pm20d2-202ENSMUST00000119167 1339 ntTSL 1 (best) BASIC18,42■□□□□ 0,54
Trav15-2-dv6-2A0A075B650 Lrrc24-201ENSMUST00000036247 1758 ntTSL 1 (best) BASIC18,42■□□□□ 0,54
Trav15-2-dv6-2A0A075B650 Map2k7-207ENSMUST00000110999 1578 ntTSL 1 (best) BASIC18,42■□□□□ 0,54
Trav15-2-dv6-2A0A075B650 Nrxn1-213ENSMUST00000172466 2477 ntTSL 5 BASIC18,41■□□□□ 0,54
Trav15-2-dv6-2A0A075B650 Dyrk1b-202ENSMUST00000172467 2523 ntTSL 1 (best) BASIC18,41■□□□□ 0,54
Trav15-2-dv6-2A0A075B650 Dyrk1b-201ENSMUST00000085901 2534 ntAPPRIS P3 TSL 1 (best) BASIC18,41■□□□□ 0,54
Trav15-2-dv6-2A0A075B650 C2cd4d-201ENSMUST00000169433 1321 ntAPPRIS P1 TSL 3 BASIC18,41■□□□□ 0,54
Trav15-2-dv6-2A0A075B650 Acot3-202ENSMUST00000120927 1854 ntAPPRIS ALT2 TSL 1 (best) BASIC18,41■□□□□ 0,54
Trav15-2-dv6-2A0A075B650 Kcnk12-201ENSMUST00000055221 1936 ntAPPRIS P1 TSL 1 (best) BASIC18,41■□□□□ 0,54
Trav15-2-dv6-2A0A075B650 Krt10-201ENSMUST00000103131 2094 ntAPPRIS P1 TSL 1 (best) BASIC18,4■□□□□ 0,54
Trav15-2-dv6-2A0A075B650 Snx3-203ENSMUST00000105500 753 ntTSL 5 BASIC18,4■□□□□ 0,54
Trav15-2-dv6-2A0A075B650 Tcte3-201ENSMUST00000040746 788 ntAPPRIS P1 TSL 1 (best) BASIC18,4■□□□□ 0,54
Trav15-2-dv6-2A0A075B650 Tcte3-202ENSMUST00000097398 632 ntTSL 1 (best) BASIC18,4■□□□□ 0,54
Trav15-2-dv6-2A0A075B650 Triobp-201ENSMUST00000109687 2570 ntAPPRIS ALT2 TSL 1 (best) BASIC18,39■□□□□ 0,53
Trav15-2-dv6-2A0A075B650 Endog-201ENSMUST00000015481 1063 ntAPPRIS P1 TSL 1 (best) BASIC18,38■□□□□ 0,53
Trav15-2-dv6-2A0A075B650 Banp-202ENSMUST00000093078 2289 ntTSL 1 (best) BASIC18,38■□□□□ 0,53
Trav15-2-dv6-2A0A075B650 Susd6-203ENSMUST00000220238 2127 ntAPPRIS ALT2 TSL 1 (best) BASIC18,37■□□□□ 0,53
Trav15-2-dv6-2A0A075B650 Dgat2-201ENSMUST00000033001 2262 ntAPPRIS P1 TSL 1 (best) BASIC18,37■□□□□ 0,53
Trav15-2-dv6-2A0A075B650 Pou6f1-202ENSMUST00000073837 4953 ntTSL 1 (best) BASIC18,37■□□□□ 0,53
Trav15-2-dv6-2A0A075B650 Whrn-202ENSMUST00000063672 2804 ntTSL 1 (best) BASIC18,36■□□□□ 0,53
Trav15-2-dv6-2A0A075B650 Ankrd60-202ENSMUST00000119453 1084 ntAPPRIS P2 TSL 2 BASIC18,36■□□□□ 0,53
Trav15-2-dv6-2A0A075B650 Mnx1-202ENSMUST00000165512 2245 ntAPPRIS P2 TSL 1 (best) BASIC18,36■□□□□ 0,53
Trav15-2-dv6-2A0A075B650 Mlx-201ENSMUST00000017945 1965 ntAPPRIS P3 TSL 1 (best) BASIC18,36■□□□□ 0,53
Trav15-2-dv6-2A0A075B650 Nisch-201ENSMUST00000022469 5559 ntAPPRIS P3 TSL 2 BASIC18,36■□□□□ 0,53
Trav15-2-dv6-2A0A075B650 Arglu1-201ENSMUST00000048545 3197 ntAPPRIS P1 TSL 2 BASIC18,36■□□□□ 0,53
Trav15-2-dv6-2A0A075B650 Tmem200b-201ENSMUST00000094666 1370 ntAPPRIS P1 BASIC18,36■□□□□ 0,53
Trav15-2-dv6-2A0A075B650 Zfp513-201ENSMUST00000031562 2213 ntTSL 1 (best) BASIC18,35■□□□□ 0,53
Trav15-2-dv6-2A0A075B650 Smurf2-202ENSMUST00000103067 5290 ntTSL 5 BASIC18,35■□□□□ 0,53
Trav15-2-dv6-2A0A075B650 Ppp4c-211ENSMUST00000206570 1400 ntAPPRIS P1 TSL 1 (best) BASIC18,35■□□□□ 0,53
Trav15-2-dv6-2A0A075B650 Stard3nl-201ENSMUST00000039694 1327 ntAPPRIS P1 TSL 1 (best) BASIC18,35■□□□□ 0,53
Trav15-2-dv6-2A0A075B650 Nrarp-201ENSMUST00000104999 2582 ntAPPRIS P1 BASIC18,35■□□□□ 0,53
Trav15-2-dv6-2A0A075B650 Smarcc2-205ENSMUST00000218228 603 ntTSL 5 BASIC18,35■□□□□ 0,53
Trav15-2-dv6-2A0A075B650 Rab3il1-202ENSMUST00000117641 2004 ntAPPRIS ALT2 TSL 1 (best) BASIC18,35■□□□□ 0,53
Trav15-2-dv6-2A0A075B650 Snx7-201ENSMUST00000029639 2021 ntAPPRIS P2 TSL 1 (best) BASIC18,35■□□□□ 0,53
Trav15-2-dv6-2A0A075B650 Tmem158-201ENSMUST00000068140 1712 ntAPPRIS P1 BASIC18,35■□□□□ 0,53
Trav15-2-dv6-2A0A075B650 Antxr1-204ENSMUST00000204805 2156 ntAPPRIS ALT2 TSL 5 BASIC18,34■□□□□ 0,53
Trav15-2-dv6-2A0A075B650 Chst14-201ENSMUST00000099546 2090 ntAPPRIS P1 BASIC18,34■□□□□ 0,53
Trav15-2-dv6-2A0A075B650 Pard6a-205ENSMUST00000212430 1261 ntAPPRIS ALT1 TSL 1 (best) BASIC18,34■□□□□ 0,53
Trav15-2-dv6-2A0A075B650 Ubac1-201ENSMUST00000036509 1852 ntAPPRIS P2 TSL 1 (best) BASIC18,34■□□□□ 0,53
Trav15-2-dv6-2A0A075B650 Slc15a4-201ENSMUST00000031367 2732 ntAPPRIS P1 TSL 1 (best) BASIC18,34■□□□□ 0,53
Trav15-2-dv6-2A0A075B650 Mtf2-202ENSMUST00000112626 1968 ntTSL 5 BASIC18,33■□□□□ 0,53
Trav15-2-dv6-2A0A075B650 P4htm-201ENSMUST00000006853 1841 ntAPPRIS P1 TSL 1 (best) BASIC18,33■□□□□ 0,53
Trav15-2-dv6-2A0A075B650 Cdk2ap1-201ENSMUST00000031341 1315 ntAPPRIS P2 TSL 1 (best) BASIC18,33■□□□□ 0,53
Trav15-2-dv6-2A0A075B650 Acvr2b-201ENSMUST00000035093 1729 ntTSL 5 BASIC18,33■□□□□ 0,52
Trav15-2-dv6-2A0A075B650 Uba52-205ENSMUST00000129909 705 ntAPPRIS P1 TSL 2 BASIC18,33■□□□□ 0,52
Trav15-2-dv6-2A0A075B650 Cnot6-201ENSMUST00000020624 2498 ntTSL 1 (best) BASIC18,33■□□□□ 0,52
Trav15-2-dv6-2A0A075B650 Dcaf15-201ENSMUST00000041367 2312 ntTSL 1 (best) BASIC18,32■□□□□ 0,52
Trav15-2-dv6-2A0A075B650 Actr5-201ENSMUST00000045644 2402 ntAPPRIS P1 TSL 1 (best) BASIC18,32■□□□□ 0,52
Trav15-2-dv6-2A0A075B650 Klhl2-205ENSMUST00000210166 5126 ntAPPRIS ALT2 TSL 1 (best) BASIC18,32■□□□□ 0,52
Trav15-2-dv6-2A0A075B650 Prph-201ENSMUST00000024249 1769 ntAPPRIS ALT2 TSL 1 (best) BASIC18,32■□□□□ 0,52
Trav15-2-dv6-2A0A075B650 Rhbdl1-201ENSMUST00000026831 1711 ntAPPRIS P1 TSL 1 (best) BASIC18,32■□□□□ 0,52
Trav15-2-dv6-2A0A075B650 Pax1-201ENSMUST00000109968 2643 ntAPPRIS P1 TSL 1 (best) BASIC18,31■□□□□ 0,52
Trav15-2-dv6-2A0A075B650 Slc30a3-201ENSMUST00000031037 2089 ntAPPRIS P1 TSL 1 (best) BASIC18,31■□□□□ 0,52
Trav15-2-dv6-2A0A075B650 Mxra7-202ENSMUST00000047715 757 ntAPPRIS ALT2 TSL 1 (best) BASIC18,31■□□□□ 0,52
Trav15-2-dv6-2A0A075B650 C1galt1-201ENSMUST00000040159 6092 ntAPPRIS P1 TSL 1 (best) BASIC18,31■□□□□ 0,52
Trav15-2-dv6-2A0A075B650 Dlx2-201ENSMUST00000024159 2473 ntAPPRIS P1 TSL 1 (best) BASIC18,31■□□□□ 0,52
Trav15-2-dv6-2A0A075B650 Taf4-204ENSMUST00000227325 4380 ntAPPRIS ALT2 BASIC18,3■□□□□ 0,52
Trav15-2-dv6-2A0A075B650 Cops6-202ENSMUST00000110951 1098 ntAPPRIS ALT2 TSL 1 (best) BASIC18,3■□□□□ 0,52
Trav15-2-dv6-2A0A075B650 Gltp-203ENSMUST00000112214 944 ntTSL 3 BASIC18,3■□□□□ 0,52
Trav15-2-dv6-2A0A075B650 Arhgef26-201ENSMUST00000079300 5638 ntAPPRIS P1 TSL 1 (best) BASIC18,3■□□□□ 0,52
Trav15-2-dv6-2A0A075B650 Agps-202ENSMUST00000111952 2589 ntTSL 2 BASIC18,3■□□□□ 0,52
Trav15-2-dv6-2A0A075B650 Fank1-204ENSMUST00000209511 1392 ntTSL 5 BASIC18,3■□□□□ 0,52
Trav15-2-dv6-2A0A075B650 Dhrs13-201ENSMUST00000021187 1779 ntAPPRIS P1 TSL 1 (best) BASIC18,29■□□□□ 0,52
Trav15-2-dv6-2A0A075B650 B230322F03Rik-201ENSMUST00000181932 1569 ntBASIC18,29■□□□□ 0,52
Trav15-2-dv6-2A0A075B650 Mapkap1-201ENSMUST00000113123 1530 ntTSL 5 BASIC18,28■□□□□ 0,52
Trav15-2-dv6-2A0A075B650 Rfx5-204ENSMUST00000107255 2350 ntAPPRIS P1 TSL 5 BASIC18,28■□□□□ 0,52
Trav15-2-dv6-2A0A075B650 Mgrn1-202ENSMUST00000070658 3290 ntAPPRIS P3 TSL 1 (best) BASIC18,28■□□□□ 0,52
Trav15-2-dv6-2A0A075B650 Notum-202ENSMUST00000106177 2212 ntAPPRIS P1 TSL 5 BASIC18,27■□□□□ 0,52
Trav15-2-dv6-2A0A075B650 Pou2f2-204ENSMUST00000108416 1754 ntTSL 1 (best) BASIC18,27■□□□□ 0,52
Trav15-2-dv6-2A0A075B650 Lgi2-201ENSMUST00000039750 6456 ntAPPRIS P3 TSL 1 (best) BASIC18,27■□□□□ 0,52
Trav15-2-dv6-2A0A075B650 A230020J21Rik-202ENSMUST00000192407 1649 ntTSL 2 BASIC18,27■□□□□ 0,51
Trav15-2-dv6-2A0A075B650 Olfm2-203ENSMUST00000215999 1895 ntAPPRIS ALT2 TSL 3 BASIC18,26■□□□□ 0,51
Trav15-2-dv6-2A0A075B650 A230087F16Rik-201ENSMUST00000181055 2098 ntTSL 1 (best) BASIC18,26■□□□□ 0,51
Trav15-2-dv6-2A0A075B650 Pitx2-202ENSMUST00000042587 2271 ntAPPRIS ALT1 TSL 1 (best) BASIC18,26■□□□□ 0,51
Trav15-2-dv6-2A0A075B650 Ptbp3-208ENSMUST00000172768 2147 ntAPPRIS ALT2 TSL 5 BASIC18,26■□□□□ 0,51
Trav15-2-dv6-2A0A075B650 Epb41l4b-201ENSMUST00000030142 3247 ntAPPRIS P2 TSL 1 (best) BASIC18,26■□□□□ 0,51
Trav15-2-dv6-2A0A075B650 Gm6934-201ENSMUST00000194780 1905 ntBASIC18,25■□□□□ 0,51
Trav15-2-dv6-2A0A075B650 1700026D11Rik-201ENSMUST00000126910 2033 ntTSL 1 (best) BASIC18,25■□□□□ 0,51
Trav15-2-dv6-2A0A075B650 Sh3gl3-201ENSMUST00000032874 1647 ntAPPRIS P1 TSL 1 (best) BASIC18,25■□□□□ 0,51
Trav15-2-dv6-2A0A075B650 Dtnbp1-201ENSMUST00000072329 1362 ntAPPRIS P2 TSL 1 (best) BASIC18,25■□□□□ 0,51
Trav15-2-dv6-2A0A075B650 Peli3-201ENSMUST00000025834 1971 ntAPPRIS P1 TSL 1 (best) BASIC18,24■□□□□ 0,51
Trav15-2-dv6-2A0A075B650 Sdccag3-201ENSMUST00000028293 2031 ntAPPRIS ALT2 TSL 1 (best) BASIC18,24■□□□□ 0,51
Trav15-2-dv6-2A0A075B650 Gm37136-201ENSMUST00000194368 194 ntBASIC18,24■□□□□ 0,51
Trav15-2-dv6-2A0A075B650 Hand2-201ENSMUST00000040104 2351 ntAPPRIS P1 TSL 1 (best) BASIC18,24■□□□□ 0,51
Trav15-2-dv6-2A0A075B650 Nkx2-4-201ENSMUST00000067020 1725 ntAPPRIS P1 TSL 1 (best) BASIC18,23■□□□□ 0,51
Trav15-2-dv6-2A0A075B650 Asf1a-201ENSMUST00000020004 2201 ntAPPRIS P1 TSL 1 (best) BASIC18,23■□□□□ 0,51
Trav15-2-dv6-2A0A075B650 Syce2-202ENSMUST00000136026 1686 ntAPPRIS P3 TSL 1 (best) BASIC18,23■□□□□ 0,51
Trav15-2-dv6-2A0A075B650 Nt5c3-201ENSMUST00000031793 1676 ntAPPRIS P3 TSL 1 (best) BASIC18,23■□□□□ 0,51
Trav15-2-dv6-2A0A075B650 AC163623.1-201ENSMUST00000213738 727 ntAPPRIS P1 TSL 3 BASIC18,23■□□□□ 0,51
Trav15-2-dv6-2A0A075B650 Dmrt3-201ENSMUST00000048935 2390 ntAPPRIS P1 TSL 1 (best) BASIC18,23■□□□□ 0,51
Trav15-2-dv6-2A0A075B650 Lemd3-202ENSMUST00000119944 4743 ntAPPRIS P2 TSL 1 (best) BASIC18,23■□□□□ 0,51
Trav15-2-dv6-2A0A075B650 Slc25a1-201ENSMUST00000003622 1678 ntAPPRIS P1 TSL 1 (best) BASIC18,22■□□□□ 0,51
Trav15-2-dv6-2A0A075B650 Rbm45-201ENSMUST00000046389 1898 ntAPPRIS P1 TSL 1 (best) BASIC18,22■□□□□ 0,51
Trav15-2-dv6-2A0A075B650 Hoxa11-201ENSMUST00000048026 2287 ntAPPRIS P1 TSL 1 (best) BASIC18,21■□□□□ 0,51
Trav15-2-dv6-2A0A075B650 Bod1-202ENSMUST00000109415 799 ntAPPRIS P1 TSL 2 BASIC18,21■□□□□ 0,51
Trav15-2-dv6-2A0A075B650 C1qtnf5-201ENSMUST00000114815 1215 ntAPPRIS P1 TSL 1 (best) BASIC18,21■□□□□ 0,51
Trav15-2-dv6-2A0A075B650 Fbxl5-205ENSMUST00000121736 2144 ntTSL 1 (best) BASIC18,21■□□□□ 0,51
Retrieved 100 of 76,532 protein–RNA pairs in 37,5 ms