Protein–RNA interactions for Protein: A0A075B648

Trav12-3, T cell receptor alpha variable 12-3 (Fragment), mousemouse

Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav12-3A0A075B648 Rfx5-204ENSMUST00000107255 2350 ntAPPRIS P1 TSL 5 BASIC16.55■□□□□ 0.24
Trav12-3A0A075B648 Crk-204ENSMUST00000108426 671 ntTSL 3 BASIC16.55■□□□□ 0.24
Trav12-3A0A075B648 E130218I03Rik-208ENSMUST00000144222 1729 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Trav12-3A0A075B648 Rbm17-201ENSMUST00000040314 1599 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Trav12-3A0A075B648 Arnt2-201ENSMUST00000085077 6151 ntAPPRIS P2 TSL 1 (best) BASIC16.53■□□□□ 0.24
Trav12-3A0A075B648 Sdccag3-201ENSMUST00000028293 2031 ntAPPRIS ALT2 TSL 1 (best) BASIC16.53■□□□□ 0.24
Trav12-3A0A075B648 Lemd3-202ENSMUST00000119944 4743 ntAPPRIS P2 TSL 1 (best) BASIC16.53■□□□□ 0.24
Trav12-3A0A075B648 Man1a-203ENSMUST00000105470 2847 ntAPPRIS P1 TSL 5 BASIC16.53■□□□□ 0.24
Trav12-3A0A075B648 Bcl7c-201ENSMUST00000061468 1132 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Trav12-3A0A075B648 Mfn1-201ENSMUST00000091257 4562 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Trav12-3A0A075B648 C1ql2-201ENSMUST00000037286 2000 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Trav12-3A0A075B648 Porcn-201ENSMUST00000077595 1872 ntAPPRIS P4 TSL 1 (best) BASIC16.52■□□□□ 0.24
Trav12-3A0A075B648 Arhgef26-201ENSMUST00000079300 5638 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Trav12-3A0A075B648 Porcn-204ENSMUST00000089403 1854 ntAPPRIS ALT1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Trav12-3A0A075B648 Agap2-201ENSMUST00000039259 5633 ntAPPRIS P2 TSL 1 (best) BASIC16.52■□□□□ 0.24
Trav12-3A0A075B648 Slc10a3-201ENSMUST00000037967 2023 ntAPPRIS P2 TSL 1 (best) BASIC16.52■□□□□ 0.24
Trav12-3A0A075B648 E2f5-202ENSMUST00000165922 1751 ntAPPRIS ALT2 TSL 5 BASIC16.52■□□□□ 0.24
Trav12-3A0A075B648 Rmdn2-208ENSMUST00000225357 2118 ntAPPRIS P1 BASIC16.52■□□□□ 0.23
Trav12-3A0A075B648 Lor-201ENSMUST00000058150 1779 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Trav12-3A0A075B648 Pbx2-201ENSMUST00000038149 3068 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Trav12-3A0A075B648 Serpinh1-202ENSMUST00000169437 2274 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Trav12-3A0A075B648 Slc25a1-201ENSMUST00000003622 1678 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Trav12-3A0A075B648 Prpsap2-201ENSMUST00000004955 1837 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Trav12-3A0A075B648 Smad4-201ENSMUST00000025393 3384 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Trav12-3A0A075B648 Stx3-202ENSMUST00000069285 2810 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Trav12-3A0A075B648 Nab1-201ENSMUST00000069792 3874 ntAPPRIS P2 TSL 1 (best) BASIC16.5■□□□□ 0.23
Trav12-3A0A075B648 Pradc1-202ENSMUST00000113770 610 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
Trav12-3A0A075B648 Fam220a-203ENSMUST00000118121 919 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
Trav12-3A0A075B648 Frat1-201ENSMUST00000087155 2614 ntAPPRIS P1 BASIC16.5■□□□□ 0.23
Trav12-3A0A075B648 Tmpo-203ENSMUST00000092219 1854 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
Trav12-3A0A075B648 Mkrn1-202ENSMUST00000051671 1511 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
Trav12-3A0A075B648 Hsf1-207ENSMUST00000228371 2102 ntBASIC16.49■□□□□ 0.23
Trav12-3A0A075B648 Lrrc24-201ENSMUST00000036247 1758 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
Trav12-3A0A075B648 Stambp-207ENSMUST00000206592 2152 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Trav12-3A0A075B648 Doc2a-201ENSMUST00000064110 2538 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Trav12-3A0A075B648 Tmcc1-202ENSMUST00000088896 5838 ntAPPRIS P2 TSL 1 (best) BASIC16.49■□□□□ 0.23
Trav12-3A0A075B648 Tcte2-204ENSMUST00000130033 1462 ntAPPRIS ALT2 TSL 1 (best) BASIC16.48■□□□□ 0.23
Trav12-3A0A075B648 Gm25262-201ENSMUST00000174934 133 ntBASIC16.48■□□□□ 0.23
Trav12-3A0A075B648 E130307A14Rik-201ENSMUST00000129191 2011 ntTSL 3 BASIC16.48■□□□□ 0.23
Trav12-3A0A075B648 Arl5a-201ENSMUST00000036541 5239 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Trav12-3A0A075B648 C1ql1-201ENSMUST00000057849 1473 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Trav12-3A0A075B648 Rxrb-201ENSMUST00000044858 2623 ntAPPRIS P4 TSL 1 (best) BASIC16.48■□□□□ 0.23
Trav12-3A0A075B648 Ptpn12-201ENSMUST00000030556 3280 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Trav12-3A0A075B648 Cntln-204ENSMUST00000169371 5365 ntAPPRIS ALT2 TSL 5 BASIC16.47■□□□□ 0.23
Trav12-3A0A075B648 Hoxa11-201ENSMUST00000048026 2287 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Trav12-3A0A075B648 Rab22a-202ENSMUST00000109110 849 ntTSL 5 BASIC16.47■□□□□ 0.23
Trav12-3A0A075B648 Manf-202ENSMUST00000159283 2247 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Trav12-3A0A075B648 Fezf2-201ENSMUST00000022262 2188 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Trav12-3A0A075B648 Fam189a2-201ENSMUST00000096164 2547 ntAPPRIS P1 TSL 5 BASIC16.47■□□□□ 0.23
Trav12-3A0A075B648 Tshz1-201ENSMUST00000060303 5656 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Trav12-3A0A075B648 Rasgef1c-203ENSMUST00000093142 2216 ntAPPRIS P3 TSL 1 (best) BASIC16.46■□□□□ 0.23
Trav12-3A0A075B648 Chn2-201ENSMUST00000046856 2418 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Trav12-3A0A075B648 Coq2-201ENSMUST00000031262 1743 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Trav12-3A0A075B648 AC166822.3-201ENSMUST00000227394 661 ntBASIC16.46■□□□□ 0.23
Trav12-3A0A075B648 Nab2-201ENSMUST00000026469 2582 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Trav12-3A0A075B648 Kcnmb4os2-201ENSMUST00000080943 1571 ntTSL 5 BASIC16.46■□□□□ 0.23
Trav12-3A0A075B648 Bola3-207ENSMUST00000136501 2312 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Trav12-3A0A075B648 Ppp5c-201ENSMUST00000003183 2072 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.22
Trav12-3A0A075B648 Thap4-206ENSMUST00000190116 5558 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Trav12-3A0A075B648 Pcgf5-201ENSMUST00000062389 1566 ntTSL 5 BASIC16.45■□□□□ 0.22
Trav12-3A0A075B648 Gfi1-202ENSMUST00000065478 2639 ntAPPRIS ALT2 TSL 1 (best) BASIC16.45■□□□□ 0.22
Trav12-3A0A075B648 Snx5-201ENSMUST00000028909 2419 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Trav12-3A0A075B648 AC123857.1-201ENSMUST00000181053 2312 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
Trav12-3A0A075B648 E330040D14Rik-201ENSMUST00000192299 1374 ntBASIC16.44■□□□□ 0.22
Trav12-3A0A075B648 Ppp2r5a-201ENSMUST00000067976 3088 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Trav12-3A0A075B648 March5-201ENSMUST00000024078 1797 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Trav12-3A0A075B648 Man1a-201ENSMUST00000003843 5137 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Trav12-3A0A075B648 Sel1l3-201ENSMUST00000031090 4512 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Trav12-3A0A075B648 Acot5-201ENSMUST00000046422 1518 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Trav12-3A0A075B648 Carm1-203ENSMUST00000115395 3152 ntAPPRIS ALT2 TSL 1 (best) BASIC16.43■□□□□ 0.22
Trav12-3A0A075B648 Xbp1-201ENSMUST00000063084 2129 ntAPPRIS P2 TSL 1 (best) BASIC16.43■□□□□ 0.22
Trav12-3A0A075B648 Mras-201ENSMUST00000035045 4701 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Trav12-3A0A075B648 Marc1-201ENSMUST00000048462 2039 ntAPPRIS P2 TSL 1 (best) BASIC16.43■□□□□ 0.22
Trav12-3A0A075B648 Fam193b-201ENSMUST00000021957 4341 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Trav12-3A0A075B648 Agap2-202ENSMUST00000217941 5573 ntAPPRIS ALT2 TSL 1 (best) BASIC16.43■□□□□ 0.22
Trav12-3A0A075B648 Glipr2-201ENSMUST00000030202 2320 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Trav12-3A0A075B648 Map3k15-201ENSMUST00000033665 4348 ntAPPRIS P1 TSL 5 BASIC16.42■□□□□ 0.22
Trav12-3A0A075B648 2010300C02Rik-203ENSMUST00000162875 4634 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Trav12-3A0A075B648 Maz-203ENSMUST00000205568 2650 ntAPPRIS P1 TSL 5 BASIC16.42■□□□□ 0.22
Trav12-3A0A075B648 Cabp1-204ENSMUST00000112113 1621 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
Trav12-3A0A075B648 Znhit6-201ENSMUST00000098534 2339 ntAPPRIS P3 TSL 1 (best) BASIC16.41■□□□□ 0.22
Trav12-3A0A075B648 Gsx2-201ENSMUST00000040477 1665 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Trav12-3A0A075B648 Gsr-201ENSMUST00000033992 2673 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Trav12-3A0A075B648 Noc2l-202ENSMUST00000179886 2813 ntAPPRIS ALT2 TSL 1 (best) BASIC16.41■□□□□ 0.22
Trav12-3A0A075B648 Snx3-201ENSMUST00000019939 1401 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Trav12-3A0A075B648 Sh3bp1-203ENSMUST00000089378 2001 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Trav12-3A0A075B648 Thra-201ENSMUST00000064187 2452 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
Trav12-3A0A075B648 Kctd2-202ENSMUST00000106533 2649 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
Trav12-3A0A075B648 Ccnjl-201ENSMUST00000050574 2672 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Trav12-3A0A075B648 Nr5a1-202ENSMUST00000112883 2994 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Trav12-3A0A075B648 Rab3il1-202ENSMUST00000117641 2004 ntAPPRIS ALT2 TSL 1 (best) BASIC16.4■□□□□ 0.22
Trav12-3A0A075B648 Osbp-201ENSMUST00000025590 4578 ntAPPRIS P1 TSL 5 BASIC16.4■□□□□ 0.22
Trav12-3A0A075B648 5730480H06Rik-201ENSMUST00000030968 1616 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Trav12-3A0A075B648 Gm37847-201ENSMUST00000192163 1497 ntBASIC16.4■□□□□ 0.22
Trav12-3A0A075B648 Gm31748-201ENSMUST00000194938 1497 ntBASIC16.4■□□□□ 0.22
Trav12-3A0A075B648 Gng3-201ENSMUST00000096259 1699 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Trav12-3A0A075B648 Nckap5los-201ENSMUST00000159738 1712 ntTSL 2 BASIC16.39■□□□□ 0.21
Trav12-3A0A075B648 Chadl-201ENSMUST00000072910 2548 ntAPPRIS P1 TSL 5 BASIC16.39■□□□□ 0.21
Trav12-3A0A075B648 Rbmxl2-201ENSMUST00000098135 1472 ntAPPRIS P1 BASIC16.39■□□□□ 0.21
Trav12-3A0A075B648 Dbndd2-202ENSMUST00000069385 1658 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Retrieved 100 of 76,532 protein–RNA pairs in 39.5 ms