Protein–RNA interactions for Protein: A0A075B644

Trav13-1, T cell receptor alpha variable 13-1 (Fragment), mousemouse

Predictions only

Length 110 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav13-1A0A075B644 Kcnc3-201ENSMUST00000107906 5062 ntAPPRIS ALT2 TSL 1 (best) BASIC15.87■□□□□ 0.13
Trav13-1A0A075B644 Txndc9-207ENSMUST00000195032 1444 ntAPPRIS P1 TSL 2 BASIC15.86■□□□□ 0.13
Trav13-1A0A075B644 Eid1-201ENSMUST00000164756 1691 ntAPPRIS P1 BASIC15.86■□□□□ 0.13
Trav13-1A0A075B644 Pou3f3-201ENSMUST00000054883 7409 ntAPPRIS P1 BASIC15.86■□□□□ 0.13
Trav13-1A0A075B644 Gipc1-201ENSMUST00000019577 1522 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
Trav13-1A0A075B644 Rps2-ps13-201ENSMUST00000117295 882 ntBASIC15.86■□□□□ 0.13
Trav13-1A0A075B644 Gm12366-201ENSMUST00000121722 873 ntBASIC15.86■□□□□ 0.13
Trav13-1A0A075B644 Rps2-206ENSMUST00000146867 962 ntTSL 5 BASIC15.86■□□□□ 0.13
Trav13-1A0A075B644 Hscb-201ENSMUST00000056937 804 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
Trav13-1A0A075B644 Rps2-ps10-201ENSMUST00000076842 879 ntBASIC15.86■□□□□ 0.13
Trav13-1A0A075B644 Terc-201ENSMUST00000082862 423 ntBASIC15.86■□□□□ 0.13
Trav13-1A0A075B644 Gm5786-201ENSMUST00000085368 882 ntBASIC15.86■□□□□ 0.13
Trav13-1A0A075B644 Fra10ac1-201ENSMUST00000067167 1402 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
Trav13-1A0A075B644 Gal3st1-202ENSMUST00000078757 1749 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
Trav13-1A0A075B644 Pde8b-204ENSMUST00000159608 2370 ntTSL 5 BASIC15.85■□□□□ 0.13
Trav13-1A0A075B644 Frat2-201ENSMUST00000059231 2161 ntAPPRIS P1 BASIC15.85■□□□□ 0.13
Trav13-1A0A075B644 Preb-209ENSMUST00000202567 1869 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
Trav13-1A0A075B644 Klhl15-202ENSMUST00000113908 1235 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
Trav13-1A0A075B644 Runx2os1-201ENSMUST00000097320 792 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
Trav13-1A0A075B644 2510039O18Rik-201ENSMUST00000103232 2731 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
Trav13-1A0A075B644 Lor-201ENSMUST00000058150 1779 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
Trav13-1A0A075B644 Foxn3-209ENSMUST00000177451 2882 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
Trav13-1A0A075B644 Rundc3b-202ENSMUST00000115378 1891 ntAPPRIS ALT2 TSL 5 BASIC15.84■□□□□ 0.13
Trav13-1A0A075B644 Slc22a17-201ENSMUST00000050772 2290 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
Trav13-1A0A075B644 D030046N08Rik-201ENSMUST00000162318 1570 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
Trav13-1A0A075B644 Ralgapa1-204ENSMUST00000219432 6631 ntTSL 5 BASIC15.84■□□□□ 0.13
Trav13-1A0A075B644 Smagp-201ENSMUST00000066068 1132 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Trav13-1A0A075B644 Id3-201ENSMUST00000008016 1278 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Trav13-1A0A075B644 Rnaset2a-201ENSMUST00000097420 1259 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Trav13-1A0A075B644 Klhdc10-202ENSMUST00000068259 5901 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Trav13-1A0A075B644 Syde2-201ENSMUST00000039517 5495 ntAPPRIS P2 TSL 1 (best) BASIC15.84■□□□□ 0.13
Trav13-1A0A075B644 Arpc2-201ENSMUST00000006467 1404 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Trav13-1A0A075B644 Gabbr2-201ENSMUST00000107749 5750 ntAPPRIS P1 TSL 2 BASIC15.84■□□□□ 0.13
Trav13-1A0A075B644 Pcsk1n-201ENSMUST00000041096 2193 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.13
Trav13-1A0A075B644 Arnt2-201ENSMUST00000085077 6151 ntAPPRIS P2 TSL 1 (best) BASIC15.83■□□□□ 0.13
Trav13-1A0A075B644 Ildr2-206ENSMUST00000194964 2467 ntAPPRIS ALT2 TSL 1 (best) BASIC15.83■□□□□ 0.12
Trav13-1A0A075B644 Dleu2-204ENSMUST00000182286 666 ntTSL 2 BASIC15.83■□□□□ 0.12
Trav13-1A0A075B644 Dleu2-213ENSMUST00000183245 637 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
Trav13-1A0A075B644 Emid1-201ENSMUST00000062821 1947 ntAPPRIS P2 TSL 1 (best) BASIC15.83■□□□□ 0.12
Trav13-1A0A075B644 BC005561-201ENSMUST00000096452 5409 ntAPPRIS P1 TSL 2 BASIC15.83■□□□□ 0.12
Trav13-1A0A075B644 Pdcd4-203ENSMUST00000165617 1806 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Trav13-1A0A075B644 AC153366.1-201ENSMUST00000218132 1056 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
Trav13-1A0A075B644 Ybx3-202ENSMUST00000087865 1684 ntAPPRIS ALT2 TSL 1 (best) BASIC15.82■□□□□ 0.12
Trav13-1A0A075B644 Msto1-202ENSMUST00000126245 1875 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Trav13-1A0A075B644 Srcap-211ENSMUST00000189136 1960 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
Trav13-1A0A075B644 Efcc1-202ENSMUST00000159570 2293 ntAPPRIS P2 TSL 5 BASIC15.82■□□□□ 0.12
Trav13-1A0A075B644 Agap2-201ENSMUST00000039259 5633 ntAPPRIS P2 TSL 1 (best) BASIC15.81■□□□□ 0.12
Trav13-1A0A075B644 Zcchc2-201ENSMUST00000118196 5796 ntAPPRIS P4 TSL 5 BASIC15.81■□□□□ 0.12
Trav13-1A0A075B644 Zfp703-201ENSMUST00000127097 587 ntTSL 2 BASIC15.81■□□□□ 0.12
Trav13-1A0A075B644 Cox4i1-205ENSMUST00000181586 765 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Trav13-1A0A075B644 Siva1-201ENSMUST00000021728 924 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Trav13-1A0A075B644 Zranb1-202ENSMUST00000106157 5008 ntAPPRIS P2 TSL 5 BASIC15.8■□□□□ 0.12
Trav13-1A0A075B644 Brd1-203ENSMUST00000109381 4886 ntTSL 5 BASIC15.8■□□□□ 0.12
Trav13-1A0A075B644 Hoxb3-201ENSMUST00000055334 1890 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Trav13-1A0A075B644 Kctd6-201ENSMUST00000022272 1650 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Trav13-1A0A075B644 A830010M20Rik-207ENSMUST00000162298 1408 ntTSL 5 BASIC15.8■□□□□ 0.12
Trav13-1A0A075B644 Gm4419-202ENSMUST00000226239 1431 ntBASIC15.8■□□□□ 0.12
Trav13-1A0A075B644 Kiss1-202ENSMUST00000178033 496 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Trav13-1A0A075B644 Pdlim4-201ENSMUST00000018755 1182 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Trav13-1A0A075B644 Cox11-201ENSMUST00000020851 1224 ntAPPRIS P2 TSL 1 (best) BASIC15.8■□□□□ 0.12
Trav13-1A0A075B644 Fam220a-205ENSMUST00000169329 2331 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Trav13-1A0A075B644 P3h4-201ENSMUST00000066489 2178 ntAPPRIS P2 TSL 1 (best) BASIC15.8■□□□□ 0.12
Trav13-1A0A075B644 Fads2-201ENSMUST00000025567 1508 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Trav13-1A0A075B644 Ube2j2-202ENSMUST00000103175 1309 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Trav13-1A0A075B644 Gm7332-201ENSMUST00000118351 454 ntBASIC15.79■□□□□ 0.12
Trav13-1A0A075B644 4933429H19Rik-202ENSMUST00000187361 995 ntBASIC15.79■□□□□ 0.12
Trav13-1A0A075B644 Cutc-201ENSMUST00000026199 1298 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
Trav13-1A0A075B644 Syndig1l-201ENSMUST00000095550 2524 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Trav13-1A0A075B644 Taf4-204ENSMUST00000227325 4380 ntAPPRIS ALT2 BASIC15.79■□□□□ 0.12
Trav13-1A0A075B644 Ubtf-210ENSMUST00000174302 4692 ntAPPRIS P3 TSL 5 BASIC15.79■□□□□ 0.12
Trav13-1A0A075B644 Kcnq5-206ENSMUST00000173404 2775 ntAPPRIS ALT2 TSL 5 BASIC15.79■□□□□ 0.12
Trav13-1A0A075B644 Tlx2-202ENSMUST00000174674 1514 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
Trav13-1A0A075B644 Stat5b-201ENSMUST00000004143 5062 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Trav13-1A0A075B644 Mypop-201ENSMUST00000059331 2173 ntAPPRIS P1 TSL 5 BASIC15.78■□□□□ 0.12
Trav13-1A0A075B644 Kcnip2-208ENSMUST00000161886 693 ntAPPRIS P3 TSL 1 (best) BASIC15.78■□□□□ 0.12
Trav13-1A0A075B644 Hecw2-202ENSMUST00000097741 1132 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
Trav13-1A0A075B644 Tead1-203ENSMUST00000084705 2543 ntAPPRIS ALT1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Trav13-1A0A075B644 Psmb8-201ENSMUST00000025196 1628 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Trav13-1A0A075B644 Cd320-201ENSMUST00000002379 2209 ntAPPRIS P3 TSL 1 (best) BASIC15.78■□□□□ 0.12
Trav13-1A0A075B644 Gm45713-201ENSMUST00000209467 1477 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Trav13-1A0A075B644 Dpy19l1-206ENSMUST00000170356 4715 ntAPPRIS P1 TSL 5 BASIC15.77■□□□□ 0.12
Trav13-1A0A075B644 Maf-202ENSMUST00000109104 6360 ntAPPRIS P2 BASIC15.77■□□□□ 0.12
Trav13-1A0A075B644 Gm16286-202ENSMUST00000125127 1683 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
Trav13-1A0A075B644 Gm13256-201ENSMUST00000131297 520 ntTSL 3 BASIC15.77■□□□□ 0.12
Trav13-1A0A075B644 Gm39157-201ENSMUST00000212322 1180 ntTSL 5 BASIC15.77■□□□□ 0.12
Trav13-1A0A075B644 Adgrb1-201ENSMUST00000042035 6228 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Trav13-1A0A075B644 Mbd3-203ENSMUST00000105348 1222 ntTSL 5 BASIC15.76■□□□□ 0.11
Trav13-1A0A075B644 Slc30a2-203ENSMUST00000105873 1224 ntTSL 5 BASIC15.76■□□□□ 0.11
Trav13-1A0A075B644 Gm14523-201ENSMUST00000117260 558 ntBASIC15.76■□□□□ 0.11
Trav13-1A0A075B644 Wbp1-208ENSMUST00000151393 837 ntTSL 3 BASIC15.76■□□□□ 0.11
Trav13-1A0A075B644 Slc35a2-211ENSMUST00000208640 486 ntTSL 5 BASIC15.76■□□□□ 0.11
Trav13-1A0A075B644 Kiss1-201ENSMUST00000007433 779 ntAPPRIS P1 TSL 2 BASIC15.76■□□□□ 0.11
Trav13-1A0A075B644 Kctd2-201ENSMUST00000103035 1764 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Trav13-1A0A075B644 Znrf3-201ENSMUST00000109867 6311 ntAPPRIS P3 TSL 5 BASIC15.76■□□□□ 0.11
Trav13-1A0A075B644 Lpcat4-201ENSMUST00000028554 2275 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Trav13-1A0A075B644 Slc30a1-201ENSMUST00000044954 5244 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Trav13-1A0A075B644 Neurl4-202ENSMUST00000108617 4892 ntAPPRIS ALT2 TSL 5 BASIC15.76■□□□□ 0.11
Trav13-1A0A075B644 Qdpr-201ENSMUST00000015950 1380 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Trav13-1A0A075B644 Cadm1-209ENSMUST00000152459 1784 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
Trav13-1A0A075B644 Mrpl23-201ENSMUST00000038675 692 ntAPPRIS P2 TSL 1 (best) BASIC15.75■□□□□ 0.11
Retrieved 100 of 76,532 protein–RNA pairs in 56.5 ms