Protein–RNA interactions for Protein: A0A075B5Z4

Trav1, T cell receptor alpha variable 1 (Fragment), mousemouse

Predictions only

Length 110 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav1A0A075B5Z4 Gimap1-205ENSMUST00000204168 1469 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
Trav1A0A075B5Z4 1700084E18Rik-202ENSMUST00000205624 729 ntBASIC21■□□□□ 0.95
Trav1A0A075B5Z4 Tceal3-201ENSMUST00000060904 1116 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
Trav1A0A075B5Z4 Gm9812-201ENSMUST00000061934 968 ntBASIC21■□□□□ 0.95
Trav1A0A075B5Z4 Flot2-201ENSMUST00000072289 2621 ntAPPRIS P2 TSL 1 (best) BASIC21■□□□□ 0.95
Trav1A0A075B5Z4 Strn3-202ENSMUST00000169503 2791 ntTSL 1 (best) BASIC21■□□□□ 0.95
Trav1A0A075B5Z4 Mast2-203ENSMUST00000106485 5705 ntAPPRIS ALT2 TSL 1 (best) BASIC21■□□□□ 0.95
Trav1A0A075B5Z4 Mast2-204ENSMUST00000106486 5723 ntAPPRIS P4 TSL 1 (best) BASIC21■□□□□ 0.95
Trav1A0A075B5Z4 Zfyve21-201ENSMUST00000021714 1308 ntAPPRIS P2 TSL 1 (best) BASIC21■□□□□ 0.95
Trav1A0A075B5Z4 Kdf1-202ENSMUST00000105901 1699 ntAPPRIS P2 TSL 1 (best) BASIC20.99■□□□□ 0.95
Trav1A0A075B5Z4 Emc10-202ENSMUST00000118808 1872 ntAPPRIS P2 TSL 1 (best) BASIC20.99■□□□□ 0.95
Trav1A0A075B5Z4 Fus-204ENSMUST00000121616 1102 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
Trav1A0A075B5Z4 Rexo2-210ENSMUST00000217037 609 ntTSL 3 BASIC20.99■□□□□ 0.95
Trav1A0A075B5Z4 Dusp7-201ENSMUST00000172306 3213 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
Trav1A0A075B5Z4 Ccnl2-201ENSMUST00000030944 2442 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
Trav1A0A075B5Z4 Dtnbp1-202ENSMUST00000110128 1305 ntAPPRIS ALT2 TSL 5 BASIC20.99■□□□□ 0.95
Trav1A0A075B5Z4 Krtap17-1-201ENSMUST00000105049 761 ntAPPRIS P1 BASIC20.98■□□□□ 0.95
Trav1A0A075B5Z4 Gm7432-201ENSMUST00000210343 879 ntBASIC20.98■□□□□ 0.95
Trav1A0A075B5Z4 Ankrd49-205ENSMUST00000216037 1037 ntAPPRIS P1 TSL 2 BASIC20.98■□□□□ 0.95
Trav1A0A075B5Z4 4930597O21Rik-201ENSMUST00000065878 984 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
Trav1A0A075B5Z4 Nsun2-208ENSMUST00000176485 2408 ntAPPRIS ALT2 TSL 5 BASIC20.98■□□□□ 0.95
Trav1A0A075B5Z4 6330420H09Rik-201ENSMUST00000211371 1316 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
Trav1A0A075B5Z4 B3gat1-203ENSMUST00000159799 2021 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
Trav1A0A075B5Z4 Syce2-202ENSMUST00000136026 1686 ntAPPRIS P3 TSL 1 (best) BASIC20.97■□□□□ 0.95
Trav1A0A075B5Z4 Plpp5-201ENSMUST00000068916 1483 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Trav1A0A075B5Z4 Lrrc59-201ENSMUST00000021239 2837 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Trav1A0A075B5Z4 Agpat5-201ENSMUST00000033847 2841 ntAPPRIS ALT2 TSL 1 (best) BASIC20.97■□□□□ 0.95
Trav1A0A075B5Z4 H3f3aos-201ENSMUST00000097448 2905 ntBASIC20.97■□□□□ 0.95
Trav1A0A075B5Z4 Rab3il1-202ENSMUST00000117641 2004 ntAPPRIS ALT2 TSL 1 (best) BASIC20.96■□□□□ 0.95
Trav1A0A075B5Z4 Rnf149-201ENSMUST00000062525 2492 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Trav1A0A075B5Z4 D16Ertd472e-201ENSMUST00000114218 1271 ntAPPRIS P1 TSL 5 BASIC20.95■□□□□ 0.94
Trav1A0A075B5Z4 Izumo4-205ENSMUST00000218184 1196 ntAPPRIS P1 TSL 2 BASIC20.95■□□□□ 0.94
Trav1A0A075B5Z4 AC122317.2-201ENSMUST00000218708 1248 ntBASIC20.95■□□□□ 0.94
Trav1A0A075B5Z4 Med25-205ENSMUST00000207278 2287 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
Trav1A0A075B5Z4 Smurf1-201ENSMUST00000085684 5343 ntAPPRIS P4 TSL 1 (best) BASIC20.95■□□□□ 0.94
Trav1A0A075B5Z4 Fancf-201ENSMUST00000169357 1691 ntAPPRIS P1 BASIC20.95■□□□□ 0.94
Trav1A0A075B5Z4 Arhgap9-201ENSMUST00000069548 1782 ntAPPRIS P2 TSL 1 (best) BASIC20.95■□□□□ 0.94
Trav1A0A075B5Z4 Opn3-201ENSMUST00000027809 1913 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Trav1A0A075B5Z4 Lrrc4b-201ENSMUST00000058667 2728 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Trav1A0A075B5Z4 Tirap-207ENSMUST00000177129 2366 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Trav1A0A075B5Z4 Hspb1-202ENSMUST00000111155 930 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
Trav1A0A075B5Z4 Mir3960-201ENSMUST00000198213 73 ntBASIC20.94■□□□□ 0.94
Trav1A0A075B5Z4 AC154454.1-201ENSMUST00000225253 216 ntBASIC20.94■□□□□ 0.94
Trav1A0A075B5Z4 Arhgef25-205ENSMUST00000218654 2475 ntTSL 5 BASIC20.94■□□□□ 0.94
Trav1A0A075B5Z4 Fads2-201ENSMUST00000025567 1508 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Trav1A0A075B5Z4 Chst14-201ENSMUST00000099546 2090 ntAPPRIS P1 BASIC20.93■□□□□ 0.94
Trav1A0A075B5Z4 AC153911.1-201ENSMUST00000220378 758 ntBASIC20.93■□□□□ 0.94
Trav1A0A075B5Z4 Gm12818-201ENSMUST00000117562 1349 ntBASIC20.93■□□□□ 0.94
Trav1A0A075B5Z4 A830010M20Rik-207ENSMUST00000162298 1408 ntTSL 5 BASIC20.93■□□□□ 0.94
Trav1A0A075B5Z4 Iars2-202ENSMUST00000110974 2431 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
Trav1A0A075B5Z4 Tmem221-201ENSMUST00000052072 1604 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
Trav1A0A075B5Z4 Aspscr1-203ENSMUST00000106158 1690 ntTSL 5 BASIC20.93■□□□□ 0.94
Trav1A0A075B5Z4 Gm11599-201ENSMUST00000118720 878 ntBASIC20.92■□□□□ 0.94
Trav1A0A075B5Z4 AC164433.2-201ENSMUST00000226346 1701 ntBASIC20.92■□□□□ 0.94
Trav1A0A075B5Z4 Zgpat-202ENSMUST00000108807 2072 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Trav1A0A075B5Z4 Tmed2-201ENSMUST00000060226 2074 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Trav1A0A075B5Z4 Amigo1-201ENSMUST00000050909 5030 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
Trav1A0A075B5Z4 St7-207ENSMUST00000115418 1678 ntTSL 5 BASIC20.9■□□□□ 0.94
Trav1A0A075B5Z4 Mrps15-201ENSMUST00000030675 937 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Trav1A0A075B5Z4 Krt10-201ENSMUST00000103131 2094 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Trav1A0A075B5Z4 Cbln1-202ENSMUST00000169693 1699 ntAPPRIS P1 TSL 5 BASIC20.89■□□□□ 0.94
Trav1A0A075B5Z4 Tsen34-201ENSMUST00000038521 1365 ntAPPRIS P1 TSL 5 BASIC20.89■□□□□ 0.93
Trav1A0A075B5Z4 Siah1a-201ENSMUST00000045296 1968 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
Trav1A0A075B5Z4 Gm45364-201ENSMUST00000210883 159 ntBASIC20.89■□□□□ 0.93
Trav1A0A075B5Z4 Rp9-201ENSMUST00000034763 1134 ntAPPRIS P2 TSL 1 (best) BASIC20.89■□□□□ 0.93
Trav1A0A075B5Z4 Fbxl5-205ENSMUST00000121736 2144 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
Trav1A0A075B5Z4 Slc16a11-207ENSMUST00000136328 1403 ntTSL 5 BASIC20.88■□□□□ 0.93
Trav1A0A075B5Z4 Ube2e3-201ENSMUST00000028398 2249 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Trav1A0A075B5Z4 Ube2h-201ENSMUST00000094543 975 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
Trav1A0A075B5Z4 Gm6934-201ENSMUST00000194780 1905 ntBASIC20.88■□□□□ 0.93
Trav1A0A075B5Z4 Syt6-204ENSMUST00000118563 1843 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
Trav1A0A075B5Z4 P4htm-201ENSMUST00000006853 1841 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Trav1A0A075B5Z4 Gm2018-201ENSMUST00000140754 478 ntTSL 2 BASIC20.87■□□□□ 0.93
Trav1A0A075B5Z4 Hist2h3c1-201ENSMUST00000176059 1820 ntAPPRIS P1 BASIC20.87■□□□□ 0.93
Trav1A0A075B5Z4 Hist2h3c1-202ENSMUST00000177796 1825 ntBASIC20.87■□□□□ 0.93
Trav1A0A075B5Z4 Htra1-201ENSMUST00000006367 2041 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
Trav1A0A075B5Z4 Emid1-208ENSMUST00000163299 1923 ntAPPRIS ALT2 TSL 5 BASIC20.86■□□□□ 0.93
Trav1A0A075B5Z4 Siah1b-202ENSMUST00000071667 1712 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Trav1A0A075B5Z4 Azin2-203ENSMUST00000119354 1921 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
Trav1A0A075B5Z4 Ube2k-203ENSMUST00000201266 1449 ntTSL 5 BASIC20.86■□□□□ 0.93
Trav1A0A075B5Z4 Ptbp3-208ENSMUST00000172768 2147 ntAPPRIS ALT2 TSL 5 BASIC20.86■□□□□ 0.93
Trav1A0A075B5Z4 Mnx1-202ENSMUST00000165512 2245 ntAPPRIS P2 TSL 1 (best) BASIC20.85■□□□□ 0.93
Trav1A0A075B5Z4 Dapk2-201ENSMUST00000034944 1772 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Trav1A0A075B5Z4 Hecw2-202ENSMUST00000097741 1132 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
Trav1A0A075B5Z4 Kcnq5-206ENSMUST00000173404 2775 ntAPPRIS ALT2 TSL 5 BASIC20.84■□□□□ 0.93
Trav1A0A075B5Z4 Npas1-202ENSMUST00000210748 1959 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Trav1A0A075B5Z4 Tbr1-202ENSMUST00000102737 1406 ntTSL 2 BASIC20.84■□□□□ 0.93
Trav1A0A075B5Z4 4933440N22Rik-202ENSMUST00000204444 1952 ntBASIC20.83■□□□□ 0.93
Trav1A0A075B5Z4 Gm21989-201ENSMUST00000174530 1609 ntTSL 1 (best) BASIC20.83■□□□□ 0.93
Trav1A0A075B5Z4 Terc-201ENSMUST00000082862 423 ntBASIC20.83■□□□□ 0.93
Trav1A0A075B5Z4 Srd5a3-201ENSMUST00000031143 1747 ntAPPRIS P2 TSL 1 (best) BASIC20.83■□□□□ 0.92
Trav1A0A075B5Z4 Insc-208ENSMUST00000169913 2321 ntAPPRIS P1 TSL 5 BASIC20.83■□□□□ 0.92
Trav1A0A075B5Z4 Zswim5-201ENSMUST00000044823 5582 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
Trav1A0A075B5Z4 Slc25a1-201ENSMUST00000003622 1678 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
Trav1A0A075B5Z4 Rnf19b-206ENSMUST00000168461 2532 ntAPPRIS P2 TSL 5 BASIC20.82■□□□□ 0.92
Trav1A0A075B5Z4 St7-209ENSMUST00000115420 2094 ntTSL 5 BASIC20.82■□□□□ 0.92
Trav1A0A075B5Z4 Arrdc2-201ENSMUST00000002989 2355 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Trav1A0A075B5Z4 Foxc1-201ENSMUST00000062292 5844 ntAPPRIS P1 BASIC20.82■□□□□ 0.92
Trav1A0A075B5Z4 Tmem106c-201ENSMUST00000064200 1635 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Trav1A0A075B5Z4 Tmem150a-202ENSMUST00000132243 1478 ntTSL 5 BASIC20.81■□□□□ 0.92
Retrieved 100 of 76,532 protein–RNA pairs in 1689.2 ms