Protein–RNA interactions for Protein: S4R1G7

H2afb3, Histone H2A, mousemouse

Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
H2afb3S4R1G7 Lce1a1-201ENSMUST00000074142 705 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
H2afb3S4R1G7 Hbb-bt-201ENSMUST00000098192 703 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
H2afb3S4R1G7 Tomm34-201ENSMUST00000018466 2302 ntAPPRIS P3 TSL 1 (best) BASIC13.71□□□□□ -0.21
H2afb3S4R1G7 Ephb2-201ENSMUST00000059287 4804 ntAPPRIS ALT2 TSL 2 BASIC13.71□□□□□ -0.21
H2afb3S4R1G7 Sbno2-204ENSMUST00000217972 2462 ntTSL 2 BASIC13.71□□□□□ -0.21
H2afb3S4R1G7 Cstf2-203ENSMUST00000113287 3661 ntTSL 1 (best) BASIC13.71□□□□□ -0.22
H2afb3S4R1G7 Cyp2d10-201ENSMUST00000072776 1647 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.22
H2afb3S4R1G7 Arhgef9-217ENSMUST00000197364 1796 ntTSL 5 BASIC13.71□□□□□ -0.22
H2afb3S4R1G7 Hspb6-201ENSMUST00000044048 1363 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.22
H2afb3S4R1G7 Arid4b-203ENSMUST00000110534 5864 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
H2afb3S4R1G7 Lrrc24-202ENSMUST00000049956 1904 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
H2afb3S4R1G7 Tpbg-201ENSMUST00000006559 3603 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
H2afb3S4R1G7 Prr15-201ENSMUST00000059138 1511 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
H2afb3S4R1G7 Arhgap44-203ENSMUST00000093002 3982 ntAPPRIS ALT2 TSL 5 BASIC13.7□□□□□ -0.22
H2afb3S4R1G7 Gyg-203ENSMUST00000178328 1698 ntAPPRIS P2 TSL 1 (best) BASIC13.7□□□□□ -0.22
H2afb3S4R1G7 Lman1-202ENSMUST00000120461 2208 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
H2afb3S4R1G7 Zfp202-203ENSMUST00000168832 3329 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
H2afb3S4R1G7 Tpm2-203ENSMUST00000107914 1164 ntAPPRIS ALT1 TSL 1 (best) BASIC13.7□□□□□ -0.22
H2afb3S4R1G7 Dpy30-201ENSMUST00000112571 790 ntAPPRIS P1 TSL 2 BASIC13.7□□□□□ -0.22
H2afb3S4R1G7 BC028777-201ENSMUST00000137883 985 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
H2afb3S4R1G7 Ascl5-201ENSMUST00000180436 567 ntAPPRIS P1 BASIC13.7□□□□□ -0.22
H2afb3S4R1G7 Gm44973-201ENSMUST00000207050 1003 ntAPPRIS P1 TSL 3 BASIC13.7□□□□□ -0.22
H2afb3S4R1G7 Ak6-201ENSMUST00000022135 1298 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
H2afb3S4R1G7 Snhg10-202ENSMUST00000222812 527 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
H2afb3S4R1G7 AC130711.1-201ENSMUST00000224277 906 ntAPPRIS P1 BASIC13.7□□□□□ -0.22
H2afb3S4R1G7 Il3ra-205ENSMUST00000224877 1128 ntAPPRIS ALT2 BASIC13.7□□□□□ -0.22
H2afb3S4R1G7 Rhebl1-201ENSMUST00000024518 1185 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
H2afb3S4R1G7 Nthl1-201ENSMUST00000047611 1080 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
H2afb3S4R1G7 Lce1i-201ENSMUST00000090866 731 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
H2afb3S4R1G7 Mief1-202ENSMUST00000166030 2712 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
H2afb3S4R1G7 Adam9-202ENSMUST00000084035 3985 ntAPPRIS ALT2 TSL 1 (best) BASIC13.7□□□□□ -0.22
H2afb3S4R1G7 Pomgnt2-206ENSMUST00000216669 2504 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
H2afb3S4R1G7 Kcnh4-202ENSMUST00000107363 3948 ntAPPRIS P1 TSL 5 BASIC13.7□□□□□ -0.22
H2afb3S4R1G7 Ttc14-202ENSMUST00000108210 2684 ntAPPRIS ALT2 TSL 5 BASIC13.7□□□□□ -0.22
H2afb3S4R1G7 Serp1-201ENSMUST00000029385 4611 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
H2afb3S4R1G7 Tmem185b-202ENSMUST00000183952 2824 ntAPPRIS P1 BASIC13.7□□□□□ -0.22
H2afb3S4R1G7 AC148324.1-201ENSMUST00000219034 4240 ntBASIC13.7□□□□□ -0.22
H2afb3S4R1G7 Rnps1-203ENSMUST00000163717 1920 ntAPPRIS P1 TSL 5 BASIC13.7□□□□□ -0.22
H2afb3S4R1G7 Gm10814-201ENSMUST00000180505 1933 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
H2afb3S4R1G7 Scube1-205ENSMUST00000171496 7824 ntAPPRIS P3 TSL 5 BASIC13.7□□□□□ -0.22
H2afb3S4R1G7 Mllt1-201ENSMUST00000025053 3608 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
H2afb3S4R1G7 Dcakd-201ENSMUST00000021313 1744 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
H2afb3S4R1G7 Zhx3-203ENSMUST00000109460 4480 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
H2afb3S4R1G7 Tnfaip8l1-201ENSMUST00000077788 2379 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
H2afb3S4R1G7 Senp1-204ENSMUST00000180657 3806 ntAPPRIS ALT2 TSL 1 (best) BASIC13.69□□□□□ -0.22
H2afb3S4R1G7 Ttc3-201ENSMUST00000117648 7417 ntAPPRIS P1 TSL 5 BASIC13.69□□□□□ -0.22
H2afb3S4R1G7 Repin1-202ENSMUST00000118229 3138 ntAPPRIS ALT2 TSL 1 (best) BASIC13.69□□□□□ -0.22
H2afb3S4R1G7 Nhlh2-202ENSMUST00000196324 2647 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
H2afb3S4R1G7 Ppip5k2-201ENSMUST00000042509 5882 ntAPPRIS P2 TSL 1 (best) BASIC13.69□□□□□ -0.22
H2afb3S4R1G7 Sidt2-201ENSMUST00000038488 4248 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
H2afb3S4R1G7 Col2a1-202ENSMUST00000088355 4862 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
H2afb3S4R1G7 Kdm4b-202ENSMUST00000086835 4360 ntAPPRIS ALT2 TSL 5 BASIC13.69□□□□□ -0.22
H2afb3S4R1G7 Skor1-201ENSMUST00000055281 3657 ntAPPRIS P3 TSL 1 (best) BASIC13.69□□□□□ -0.22
H2afb3S4R1G7 E430018J23Rik-201ENSMUST00000074249 2063 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
H2afb3S4R1G7 Prkcz-203ENSMUST00000105624 694 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
H2afb3S4R1G7 Cldn7-203ENSMUST00000108596 664 ntTSL 3 BASIC13.69□□□□□ -0.22
H2afb3S4R1G7 Aicda-202ENSMUST00000160685 1292 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
H2afb3S4R1G7 Hist1h2bc-201ENSMUST00000018246 1156 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
H2afb3S4R1G7 Gm18622-201ENSMUST00000219361 595 ntBASIC13.69□□□□□ -0.22
H2afb3S4R1G7 AC160980.1-201ENSMUST00000224136 970 ntBASIC13.69□□□□□ -0.22
H2afb3S4R1G7 Mrps6-201ENSMUST00000047429 846 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
H2afb3S4R1G7 Hist1h2ba-201ENSMUST00000052776 384 ntAPPRIS P1 BASIC13.69□□□□□ -0.22
H2afb3S4R1G7 Aqp12-201ENSMUST00000059676 1088 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
H2afb3S4R1G7 S100a16-202ENSMUST00000098911 1127 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
H2afb3S4R1G7 Hsp90b1-201ENSMUST00000020238 2825 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
H2afb3S4R1G7 Hoxd3-203ENSMUST00000111983 2968 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
H2afb3S4R1G7 Dagla-201ENSMUST00000039327 5634 ntAPPRIS P1 TSL 5 BASIC13.69□□□□□ -0.22
H2afb3S4R1G7 Gm26666-201ENSMUST00000180763 2461 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
H2afb3S4R1G7 Grik4-202ENSMUST00000114865 5887 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
H2afb3S4R1G7 Tbc1d20-201ENSMUST00000028963 3386 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
H2afb3S4R1G7 Chst3-203ENSMUST00000167915 1672 ntAPPRIS ALT2 TSL 1 (best) BASIC13.69□□□□□ -0.22
H2afb3S4R1G7 Camk1g-204ENSMUST00000169907 1968 ntTSL 5 BASIC13.69□□□□□ -0.22
H2afb3S4R1G7 Cryzl1-201ENSMUST00000073466 1965 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
H2afb3S4R1G7 Ddx49-201ENSMUST00000008004 2137 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
H2afb3S4R1G7 Iqcb1-201ENSMUST00000023535 2257 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
H2afb3S4R1G7 Gm5934-201ENSMUST00000120734 2588 ntAPPRIS P1 TSL 5 BASIC13.69□□□□□ -0.22
H2afb3S4R1G7 P3h1-204ENSMUST00000121111 3188 ntAPPRIS ALT2 TSL 1 (best) BASIC13.69□□□□□ -0.22
H2afb3S4R1G7 Vav1-204ENSMUST00000169220 2810 ntAPPRIS ALT2 TSL 1 (best) BASIC13.68□□□□□ -0.22
H2afb3S4R1G7 Mcrs1-201ENSMUST00000041190 1915 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
H2afb3S4R1G7 Fam151a-201ENSMUST00000047620 1923 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
H2afb3S4R1G7 6030419C18Rik-202ENSMUST00000216294 1601 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
H2afb3S4R1G7 Zfp36l2-201ENSMUST00000060366 3530 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
H2afb3S4R1G7 Pld2-202ENSMUST00000108556 3391 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
H2afb3S4R1G7 Gypc-203ENSMUST00000174459 2180 ntAPPRIS P3 TSL 1 (best) BASIC13.68□□□□□ -0.22
H2afb3S4R1G7 Retreg3-202ENSMUST00000107295 3179 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
H2afb3S4R1G7 Agfg1-201ENSMUST00000063380 2896 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
H2afb3S4R1G7 Tmed9-201ENSMUST00000109905 1420 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
H2afb3S4R1G7 Pqlc2-205ENSMUST00000172747 1405 ntAPPRIS P2 TSL 5 BASIC13.68□□□□□ -0.22
H2afb3S4R1G7 Mms22l-201ENSMUST00000050446 4261 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
H2afb3S4R1G7 Gm7284-201ENSMUST00000131667 944 ntBASIC13.68□□□□□ -0.22
H2afb3S4R1G7 Mpst-202ENSMUST00000167140 1279 ntAPPRIS P1 TSL 5 BASIC13.68□□□□□ -0.22
H2afb3S4R1G7 Gm7286-201ENSMUST00000182691 1007 ntBASIC13.68□□□□□ -0.22
H2afb3S4R1G7 Gm27867-201ENSMUST00000184778 125 ntBASIC13.68□□□□□ -0.22
H2afb3S4R1G7 Pmf1-205ENSMUST00000193338 795 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
H2afb3S4R1G7 Gm33142-201ENSMUST00000193913 867 ntBASIC13.68□□□□□ -0.22
H2afb3S4R1G7 1700012D14Rik-201ENSMUST00000209597 605 ntTSL 3 BASIC13.68□□□□□ -0.22
H2afb3S4R1G7 Prss40-201ENSMUST00000047840 1275 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
H2afb3S4R1G7 Gpank1-201ENSMUST00000052167 1295 ntAPPRIS P3 TSL 1 (best) BASIC13.68□□□□□ -0.22
H2afb3S4R1G7 Ifi27l2a-201ENSMUST00000055071 463 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
H2afb3S4R1G7 Olfr571-201ENSMUST00000061738 969 ntAPPRIS P1 BASIC13.68□□□□□ -0.22
Retrieved 100 of 76,532 protein–RNA pairs in 23.6 ms