Protein–RNA interactions for Protein: Q9R1R2

Trim3, Tripartite motif-containing protein 3, mousemouse

Predictions only

Length 744 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim3Q9R1R2 Gimap3-201ENSMUST00000038811 1968 ntAPPRIS P1 TSL 2 BASIC14.33□□□□□ -0.12
Trim3Q9R1R2 Capn1-201ENSMUST00000025891 3100 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Trim3Q9R1R2 Nap1l4-209ENSMUST00000209098 2281 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Trim3Q9R1R2 Gm8784-201ENSMUST00000222096 1435 ntBASIC14.32□□□□□ -0.12
Trim3Q9R1R2 Sppl2b-201ENSMUST00000035597 2869 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Trim3Q9R1R2 Tcp11-202ENSMUST00000043925 1746 ntAPPRIS ALT2 TSL 5 BASIC14.32□□□□□ -0.12
Trim3Q9R1R2 Gm10584-201ENSMUST00000207036 2628 ntBASIC14.32□□□□□ -0.12
Trim3Q9R1R2 Smarca5-201ENSMUST00000043359 6113 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Trim3Q9R1R2 Uck2-202ENSMUST00000053686 4731 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Trim3Q9R1R2 2610027K06Rik-203ENSMUST00000140673 2076 ntTSL 5 BASIC14.32□□□□□ -0.12
Trim3Q9R1R2 Upf1-202ENSMUST00000215817 4518 ntAPPRIS ALT2 TSL 1 (best) BASIC14.32□□□□□ -0.12
Trim3Q9R1R2 Slc4a1ap-206ENSMUST00000201858 2109 ntAPPRIS ALT2 TSL 1 (best) BASIC14.32□□□□□ -0.12
Trim3Q9R1R2 Stard7-201ENSMUST00000110374 1530 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Trim3Q9R1R2 Plxnb1-201ENSMUST00000072093 8649 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Trim3Q9R1R2 Efcab14-204ENSMUST00000106525 2792 ntAPPRIS ALT2 TSL 1 (best) BASIC14.32□□□□□ -0.12
Trim3Q9R1R2 Cadm2-203ENSMUST00000120898 2768 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Trim3Q9R1R2 Slc3a2-202ENSMUST00000170157 2813 ntAPPRIS ALT2 TSL 1 (best) BASIC14.32□□□□□ -0.12
Trim3Q9R1R2 Grk3-203ENSMUST00000197776 1570 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Trim3Q9R1R2 Las1l-201ENSMUST00000079987 2530 ntAPPRIS P2 TSL 1 (best) BASIC14.32□□□□□ -0.12
Trim3Q9R1R2 Tnnt1-203ENSMUST00000108587 1059 ntAPPRIS ALT2 TSL 1 (best) BASIC14.32□□□□□ -0.12
Trim3Q9R1R2 Gm11780-201ENSMUST00000136880 516 ntBASIC14.32□□□□□ -0.12
Trim3Q9R1R2 Smarca5-ps-202ENSMUST00000171805 1284 ntBASIC14.32□□□□□ -0.12
Trim3Q9R1R2 Gm21887-203ENSMUST00000180251 531 ntAPPRIS P5 TSL 5 BASIC14.32□□□□□ -0.12
Trim3Q9R1R2 Bag2-203ENSMUST00000187602 378 ntTSL 2 BASIC14.32□□□□□ -0.12
Trim3Q9R1R2 6430573P05Rik-202ENSMUST00000192648 597 ntTSL 3 BASIC14.32□□□□□ -0.12
Trim3Q9R1R2 1700016B15Rik-201ENSMUST00000209027 733 ntBASIC14.32□□□□□ -0.12
Trim3Q9R1R2 1700012D14Rik-201ENSMUST00000209597 605 ntTSL 3 BASIC14.32□□□□□ -0.12
Trim3Q9R1R2 Ndufb9-201ENSMUST00000022980 704 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Trim3Q9R1R2 Mtus2-201ENSMUST00000071878 1211 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Trim3Q9R1R2 Slc35c2-203ENSMUST00000109299 1926 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Trim3Q9R1R2 6030419C18Rik-202ENSMUST00000216294 1601 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Trim3Q9R1R2 Ambra1-205ENSMUST00000111317 4929 ntTSL 5 BASIC14.32□□□□□ -0.12
Trim3Q9R1R2 Btd-201ENSMUST00000090147 2324 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Trim3Q9R1R2 Disc1-205ENSMUST00000117658 2671 ntAPPRIS P3 TSL 1 (best) BASIC14.32□□□□□ -0.12
Trim3Q9R1R2 1700066M21Rik-201ENSMUST00000042734 3008 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Trim3Q9R1R2 Eif2b1-201ENSMUST00000031334 2013 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Trim3Q9R1R2 Slc22a7-201ENSMUST00000087012 2007 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Trim3Q9R1R2 Mapk8ip3-207ENSMUST00000121723 5410 ntAPPRIS ALT2 TSL 1 (best) BASIC14.32□□□□□ -0.12
Trim3Q9R1R2 Zmym4-201ENSMUST00000106108 7102 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Trim3Q9R1R2 Slc44a5-201ENSMUST00000089948 4098 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Trim3Q9R1R2 Gm43352-201ENSMUST00000196419 3065 ntBASIC14.32□□□□□ -0.12
Trim3Q9R1R2 P3h1-204ENSMUST00000121111 3188 ntAPPRIS ALT2 TSL 1 (best) BASIC14.32□□□□□ -0.12
Trim3Q9R1R2 Nfe2l2-201ENSMUST00000102672 2475 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Trim3Q9R1R2 Gm11960-202ENSMUST00000181063 2858 ntBASIC14.32□□□□□ -0.12
Trim3Q9R1R2 Rgs3-201ENSMUST00000065870 4698 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Trim3Q9R1R2 Sgk1-202ENSMUST00000092673 2576 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Trim3Q9R1R2 Atl1-201ENSMUST00000021466 5150 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Trim3Q9R1R2 Gata4-202ENSMUST00000118022 3374 ntAPPRIS P3 TSL 1 (best) BASIC14.31□□□□□ -0.12
Trim3Q9R1R2 Tfeb-201ENSMUST00000024786 2296 ntAPPRIS P3 TSL 1 (best) BASIC14.31□□□□□ -0.12
Trim3Q9R1R2 Fam124a-201ENSMUST00000039064 3558 ntAPPRIS P1 TSL 5 BASIC14.31□□□□□ -0.12
Trim3Q9R1R2 H2-K1-201ENSMUST00000025181 1605 ntAPPRIS P3 TSL 1 (best) BASIC14.31□□□□□ -0.12
Trim3Q9R1R2 Parp3-203ENSMUST00000123555 2495 ntAPPRIS P3 TSL 1 (best) BASIC14.31□□□□□ -0.12
Trim3Q9R1R2 Susd6-201ENSMUST00000068519 4977 ntAPPRIS P2 TSL 1 (best) BASIC14.31□□□□□ -0.12
Trim3Q9R1R2 Med20-201ENSMUST00000024778 2054 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Trim3Q9R1R2 Arid4b-201ENSMUST00000039538 5844 ntTSL 5 BASIC14.31□□□□□ -0.12
Trim3Q9R1R2 9130019P16Rik-201ENSMUST00000135612 1019 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Trim3Q9R1R2 Mkln1os-202ENSMUST00000144232 964 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Trim3Q9R1R2 4930477E14Rik-201ENSMUST00000181412 621 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Trim3Q9R1R2 Rps13-ps1-201ENSMUST00000183478 538 ntBASIC14.31□□□□□ -0.12
Trim3Q9R1R2 Abhd18-206ENSMUST00000203650 797 ntTSL 5 BASIC14.31□□□□□ -0.12
Trim3Q9R1R2 Gm20383-201ENSMUST00000203799 1227 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Trim3Q9R1R2 Gm44771-201ENSMUST00000206975 626 ntBASIC14.31□□□□□ -0.12
Trim3Q9R1R2 Gm10060-201ENSMUST00000212002 111 ntBASIC14.31□□□□□ -0.12
Trim3Q9R1R2 Gm18622-201ENSMUST00000219361 595 ntBASIC14.31□□□□□ -0.12
Trim3Q9R1R2 Bpifa3-201ENSMUST00000028984 1107 ntAPPRIS P3 TSL 1 (best) BASIC14.31□□□□□ -0.12
Trim3Q9R1R2 Mrpl17-201ENSMUST00000033170 1028 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Trim3Q9R1R2 Mrgpra9-201ENSMUST00000098436 1049 ntAPPRIS ALT2 TSL 5 BASIC14.31□□□□□ -0.12
Trim3Q9R1R2 Slc43a3-201ENSMUST00000090726 2583 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Trim3Q9R1R2 Islr2-203ENSMUST00000163897 4303 ntAPPRIS P3 TSL 2 BASIC14.31□□□□□ -0.12
Trim3Q9R1R2 Pcdha1-201ENSMUST00000070797 5248 ntAPPRIS P2 TSL 1 (best) BASIC14.31□□□□□ -0.12
Trim3Q9R1R2 4930528D03Rik-201ENSMUST00000181528 1339 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Trim3Q9R1R2 Asf1b-201ENSMUST00000005607 1788 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Trim3Q9R1R2 Klf15-204ENSMUST00000203607 2240 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Trim3Q9R1R2 Cdk2-201ENSMUST00000026415 2240 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Trim3Q9R1R2 Dgkq-201ENSMUST00000053913 4938 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Trim3Q9R1R2 Elmsan1-202ENSMUST00000110294 7156 ntAPPRIS P1 TSL 5 BASIC14.31□□□□□ -0.12
Trim3Q9R1R2 Foxp2-207ENSMUST00000115477 6760 ntAPPRIS P3 TSL 1 (best) BASIC14.31□□□□□ -0.12
Trim3Q9R1R2 Dyrk3-201ENSMUST00000016670 3164 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Trim3Q9R1R2 Rbm33-202ENSMUST00000059644 9510 ntAPPRIS P2 TSL 5 BASIC14.31□□□□□ -0.12
Trim3Q9R1R2 Smox-204ENSMUST00000110181 2299 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Trim3Q9R1R2 Six4-201ENSMUST00000043208 6402 ntAPPRIS P2 TSL 1 (best) BASIC14.31□□□□□ -0.12
Trim3Q9R1R2 Adam11-201ENSMUST00000068150 5102 ntAPPRIS ALT2 TSL 1 (best) BASIC14.31□□□□□ -0.12
Trim3Q9R1R2 Gm10814-201ENSMUST00000180505 1933 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Trim3Q9R1R2 Cnksr3-201ENSMUST00000015346 3447 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Trim3Q9R1R2 Nxpe3-201ENSMUST00000099705 6430 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Trim3Q9R1R2 Rbm42-202ENSMUST00000108141 1526 ntAPPRIS ALT2 TSL 5 BASIC14.31□□□□□ -0.12
Trim3Q9R1R2 Gm10505-201ENSMUST00000151398 1587 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
Trim3Q9R1R2 Tnip2-203ENSMUST00000114359 1642 ntTSL 5 BASIC14.3□□□□□ -0.12
Trim3Q9R1R2 Map2k3-201ENSMUST00000019076 2198 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Trim3Q9R1R2 Cnbp-203ENSMUST00000113619 1661 ntAPPRIS P2 TSL 1 (best) BASIC14.3□□□□□ -0.12
Trim3Q9R1R2 Ndst2-202ENSMUST00000223679 3907 ntAPPRIS P1 BASIC14.3□□□□□ -0.12
Trim3Q9R1R2 Enah-204ENSMUST00000111030 2844 ntAPPRIS ALT2 TSL 1 (best) BASIC14.3□□□□□ -0.12
Trim3Q9R1R2 Spdef-201ENSMUST00000025054 1824 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Trim3Q9R1R2 Rfx5-207ENSMUST00000137088 4333 ntAPPRIS P1 TSL 5 BASIC14.3□□□□□ -0.12
Trim3Q9R1R2 Sox1ot-202ENSMUST00000186174 7420 ntTSL 5 BASIC14.3□□□□□ -0.12
Trim3Q9R1R2 Cdk16-201ENSMUST00000033380 3120 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Trim3Q9R1R2 Tbc1d30-201ENSMUST00000064107 5695 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Trim3Q9R1R2 1700023H06Rik-201ENSMUST00000161006 1044 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
Trim3Q9R1R2 Prr3-202ENSMUST00000165613 767 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
Trim3Q9R1R2 Gm28411-202ENSMUST00000191318 464 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
Retrieved 100 of 76,532 protein–RNA pairs in 63.8 ms